RNA–Protein interactions for RNA: ENST00000494299.1

SAPCD1-211, Transcript of suppressor APC domain containing 1, humanhuman

TSL 3

Gene SAPCD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-211ENST00000494299 SETDB2Q96T68 719 aa17.4■□□□□ 0.38
SAPCD1-211ENST00000494299 HOXB7P09629 217 aa17.39■□□□□ 0.37
SAPCD1-211ENST00000494299 DALRD3Q5D0E6 543 aaKnown RBP17.39■□□□□ 0.37
SAPCD1-211ENST00000494299 BCS1LQ9Y276 419 aa17.39■□□□□ 0.37
SAPCD1-211ENST00000494299 ZNF652Q9Y2D9 606 aa17.39■□□□□ 0.37
SAPCD1-211ENST00000494299 ZNF330Q9Y3S2 320 aaPredicted RBP17.39■□□□□ 0.37
SAPCD1-211ENST00000494299 MAP3K15Q6ZN16 1313 aa17.39■□□□□ 0.37
SAPCD1-211ENST00000494299 NEUROD2Q15784 382 aa17.38■□□□□ 0.37
SAPCD1-211ENST00000494299 CCDC27Q2M243 656 aa17.38■□□□□ 0.37
SAPCD1-211ENST00000494299 BICDL1Q6ZP65 573 aa17.38■□□□□ 0.37
SAPCD1-211ENST00000494299 TTLL7Q6ZT98 887 aa17.38■□□□□ 0.37
SAPCD1-211ENST00000494299 NPM2Q86SE8 214 aaKnown RBP17.38■□□□□ 0.37
SAPCD1-211ENST00000494299 WWC3Q9ULE0 1092 aa17.38■□□□□ 0.37
SAPCD1-211ENST00000494299 IBTKQ9P2D0 1353 aaPredicted RBP17.38■□□□□ 0.37
SAPCD1-211ENST00000494299 FER1L6Q2WGJ9 1857 aa17.37■□□□□ 0.37
SAPCD1-211ENST00000494299 RIC1Q4ADV7 1423 aa17.37■□□□□ 0.37
SAPCD1-211ENST00000494299 PDE6BP35913 854 aa17.36■□□□□ 0.37
SAPCD1-211ENST00000494299 KRT24Q2M2I5 525 aa17.36■□□□□ 0.37
SAPCD1-211ENST00000494299 CNBD1Q8NA66 436 aa17.36■□□□□ 0.37
SAPCD1-211ENST00000494299 IFT57Q9NWB7 429 aa17.36■□□□□ 0.37
SAPCD1-211ENST00000494299 ANKRD36CQ5JPF3 1778 aa17.35■□□□□ 0.37
SAPCD1-211ENST00000494299 SRGNP10124 158 aa17.35■□□□□ 0.37
SAPCD1-211ENST00000494299 PROSER3Q2NL68 480 aa17.35■□□□□ 0.37
SAPCD1-211ENST00000494299 C2CD5Q86YS7 1000 aa17.35■□□□□ 0.37
SAPCD1-211ENST00000494299 ZNF34Q8IZ26 560 aa17.35■□□□□ 0.37
SAPCD1-211ENST00000494299 MBIPQ9NS73 344 aa17.35■□□□□ 0.37
SAPCD1-211ENST00000494299 SLX4Q8IY92 1834 aa17.35■□□□□ 0.37
SAPCD1-211ENST00000494299 H0YIN7 160 aa17.34■□□□□ 0.37
SAPCD1-211ENST00000494299 GIGYF2Q6Y7W6 1299 aaKnown RBP17.34■□□□□ 0.37
SAPCD1-211ENST00000494299 TTLL6Q8N841 843 aa17.34■□□□□ 0.37
SAPCD1-211ENST00000494299 DDX21Q9NR30 783 aaKnown RBP eCLIP17.34■□□□□ 0.37
SAPCD1-211ENST00000494299 NIP7Q9Y221 180 aaKnown RBP eCLIP17.34■□□□□ 0.37
SAPCD1-211ENST00000494299 UBN2Q6ZU65 1347 aa17.33■□□□□ 0.36
SAPCD1-211ENST00000494299 ANP32CO43423 234 aa17.33■□□□□ 0.36
SAPCD1-211ENST00000494299 MYL6BP14649 208 aa17.33■□□□□ 0.36
SAPCD1-211ENST00000494299 STYK1Q6J9G0 422 aa17.33■□□□□ 0.36
SAPCD1-211ENST00000494299 TNRC6CQ9HCJ0 1690 aaKnown RBP17.32■□□□□ 0.36
SAPCD1-211ENST00000494299 CEP350Q5VT06 3117 aa17.32■□□□□ 0.36
SAPCD1-211ENST00000494299 CALD1Q05682 793 aaKnown RBP17.32■□□□□ 0.36
SAPCD1-211ENST00000494299 CRY2Q49AN0 593 aa17.32■□□□□ 0.36
SAPCD1-211ENST00000494299 TPTE2Q6XPS3 522 aa17.32■□□□□ 0.36
SAPCD1-211ENST00000494299 NBPF5PQ86XG9 351 aaPredicted RBP17.32■□□□□ 0.36
SAPCD1-211ENST00000494299 C7orf43Q8WVR3 580 aa17.32■□□□□ 0.36
SAPCD1-211ENST00000494299 DICER1Q9UPY3 1922 aaKnown RBP17.31■□□□□ 0.36
SAPCD1-211ENST00000494299 CCDC88AQ3V6T2 1871 aa17.31■□□□□ 0.36
SAPCD1-211ENST00000494299 PRELPP51888 382 aa17.31■□□□□ 0.36
SAPCD1-211ENST00000494299 GNAI1P63096 354 aa17.31■□□□□ 0.36
SAPCD1-211ENST00000494299 ST5P78524 1137 aa17.31■□□□□ 0.36
SAPCD1-211ENST00000494299 ARHGAP27Q6ZUM4 889 aa17.31■□□□□ 0.36
SAPCD1-211ENST00000494299 EIF2S2P20042 333 aaKnown RBP17.3■□□□□ 0.36
SAPCD1-211ENST00000494299 KIF6Q6ZMV9 814 aa17.3■□□□□ 0.36
SAPCD1-211ENST00000494299 WWC1Q8IX03 1113 aa17.3■□□□□ 0.36
SAPCD1-211ENST00000494299 CCDC24Q8N4L8 307 aa17.3■□□□□ 0.36
SAPCD1-211ENST00000494299 MRS2Q9HD23 443 aa17.3■□□□□ 0.36
SAPCD1-211ENST00000494299 CACNA1SQ13698 1873 aa17.3■□□□□ 0.36
SAPCD1-211ENST00000494299 SNED1Q8TER0 1413 aa17.3■□□□□ 0.36
SAPCD1-211ENST00000494299 IL16Q14005 1332 aa17.29■□□□□ 0.36
SAPCD1-211ENST00000494299 NFKBIEO00221 500 aa17.29■□□□□ 0.36
SAPCD1-211ENST00000494299 NTSR2O95665 410 aa17.29■□□□□ 0.36
SAPCD1-211ENST00000494299 ANXA1P04083 346 aa17.29■□□□□ 0.36
SAPCD1-211ENST00000494299 DUSP27Q5VZP5 1158 aa17.29■□□□□ 0.36
SAPCD1-211ENST00000494299 MASTLQ96GX5 879 aa17.29■□□□□ 0.36
SAPCD1-211ENST00000494299 ZBTB3Q9H5J0 574 aa17.29■□□□□ 0.36
SAPCD1-211ENST00000494299 ABCC12Q96J65 1359 aa17.28■□□□□ 0.36
SAPCD1-211ENST00000494299 LTBP3Q9NS15 1303 aa17.28■□□□□ 0.36
SAPCD1-211ENST00000494299 COPS6Q7L5N1 327 aa17.28■□□□□ 0.36
SAPCD1-211ENST00000494299 NGEFQ8N5V2 710 aa17.28■□□□□ 0.36
SAPCD1-211ENST00000494299 NYXQ9GZU5 481 aa17.28■□□□□ 0.36
SAPCD1-211ENST00000494299 CHPF2Q9P2E5 772 aa17.28■□□□□ 0.36
SAPCD1-211ENST00000494299 ZC3H4Q9UPT8 1303 aaKnown RBP17.27■□□□□ 0.36
SAPCD1-211ENST00000494299 NPR1P16066 1061 aa17.27■□□□□ 0.36
SAPCD1-211ENST00000494299 PARP10Q53GL7 1025 aa17.27■□□□□ 0.36
SAPCD1-211ENST00000494299 SLC10A5Q5PT55 438 aa17.27■□□□□ 0.36
SAPCD1-211ENST00000494299 HDGFL1Q5TGJ6 251 aa17.27■□□□□ 0.36
SAPCD1-211ENST00000494299 SUSD4Q5VX71 490 aa17.27■□□□□ 0.36
SAPCD1-211ENST00000494299 C9orf131Q5VYM1 1079 aa17.27■□□□□ 0.36
SAPCD1-211ENST00000494299 XAGE3Q8WTP9 111 aa17.27■□□□□ 0.36
SAPCD1-211ENST00000494299 CNKSR1Q969H4 720 aa17.27■□□□□ 0.36
SAPCD1-211ENST00000494299 DBF4Q9UBU7 674 aaPredicted RBP17.27■□□□□ 0.36
SAPCD1-211ENST00000494299 LAS1LQ9Y4W2 734 aaKnown RBP17.27■□□□□ 0.36
SAPCD1-211ENST00000494299 RNF123Q5XPI4 1314 aa17.26■□□□□ 0.35
SAPCD1-211ENST00000494299 HOXA10P31260 410 aaPredicted RBP17.26■□□□□ 0.35
SAPCD1-211ENST00000494299 TCIRG1Q13488 830 aa17.25■□□□□ 0.35
SAPCD1-211ENST00000494299 PRPF40BQ6NWY9 871 aaKnown RBP17.25■□□□□ 0.35
SAPCD1-211ENST00000494299 C8orf58Q8NAV2 365 aa17.25■□□□□ 0.35
SAPCD1-211ENST00000494299 ZNF622Q969S3 477 aaKnown RBP eCLIP17.25■□□□□ 0.35
SAPCD1-211ENST00000494299 HYPKQ9NX55 129 aa17.25■□□□□ 0.35
SAPCD1-211ENST00000494299 CACNA1FO60840 1977 aa17.25■□□□□ 0.35
SAPCD1-211ENST00000494299 LAMB2P55268 1798 aa17.25■□□□□ 0.35
SAPCD1-211ENST00000494299 LMNB1P20700 586 aa17.24■□□□□ 0.35
SAPCD1-211ENST00000494299 C1QTNF8P60827 252 aa17.24■□□□□ 0.35
SAPCD1-211ENST00000494299 TRIM28Q13263 835 aaKnown RBP17.24■□□□□ 0.35
SAPCD1-211ENST00000494299 ERFEQ4G0M1 354 aa17.24■□□□□ 0.35
SAPCD1-211ENST00000494299 HSP90AB3PQ58FF7 597 aa17.24■□□□□ 0.35
SAPCD1-211ENST00000494299 NLRP10Q86W26 655 aa17.24■□□□□ 0.35
SAPCD1-211ENST00000494299 PLBD2Q8NHP8 589 aa17.24■□□□□ 0.35
SAPCD1-211ENST00000494299 NECTIN2Q92692 538 aa17.24■□□□□ 0.35
SAPCD1-211ENST00000494299 TIAM2Q8IVF5 1701 aa17.24■□□□□ 0.35
SAPCD1-211ENST00000494299 KIF3CO14782 793 aa17.23■□□□□ 0.35
SAPCD1-211ENST00000494299 GPTP24298 496 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms