RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 ADAMTS8Q9UP79 889 aa12.85□□□□□ -0.35
UFD1-210ENST00000494054 LAMB4A4D0S4 1761 aa12.84□□□□□ -0.35
UFD1-210ENST00000494054 NEUROD2Q15784 382 aa12.84□□□□□ -0.35
UFD1-210ENST00000494054 TTLL7Q6ZT98 887 aa12.84□□□□□ -0.35
UFD1-210ENST00000494054 NMRK2Q9NPI5 230 aa12.84□□□□□ -0.35
UFD1-210ENST00000494054 ZNF219Q9P2Y4 722 aaPredicted RBP12.84□□□□□ -0.35
UFD1-210ENST00000494054 NIP7Q9Y221 180 aaKnown RBP eCLIP12.84□□□□□ -0.35
UFD1-210ENST00000494054 ZNF652Q9Y2D9 606 aa12.84□□□□□ -0.35
UFD1-210ENST00000494054 COL11A2P13942 1736 aaPredicted RBP12.84□□□□□ -0.35
UFD1-210ENST00000494054 FAM177BA6PVY3 158 aa12.83□□□□□ -0.36
UFD1-210ENST00000494054 NFKBIEO00221 500 aa12.83□□□□□ -0.36
UFD1-210ENST00000494054 RGL2O15211 777 aa12.83□□□□□ -0.36
UFD1-210ENST00000494054 NPHP1O15259 732 aa12.83□□□□□ -0.36
UFD1-210ENST00000494054 MYL6BP14649 208 aa12.83□□□□□ -0.36
UFD1-210ENST00000494054 ST5P78524 1137 aa12.83□□□□□ -0.36
UFD1-210ENST00000494054 WDR43Q15061 677 aaKnown RBP eCLIP12.83□□□□□ -0.36
UFD1-210ENST00000494054 NBPF5PQ86XG9 351 aaPredicted RBP12.83□□□□□ -0.36
UFD1-210ENST00000494054 RUNDC1Q96C34 613 aa12.83□□□□□ -0.36
UFD1-210ENST00000494054 TRIM35Q9UPQ4 493 aa12.83□□□□□ -0.36
UFD1-210ENST00000494054 PDZRN3Q9UPQ7 1066 aa12.83□□□□□ -0.36
UFD1-210ENST00000494054 SBF1O95248 1867 aa12.82□□□□□ -0.36
UFD1-210ENST00000494054 C21orf2O43822 256 aa12.82□□□□□ -0.36
UFD1-210ENST00000494054 SRGNP10124 158 aa12.82□□□□□ -0.36
UFD1-210ENST00000494054 ERVV-1B6SEH8 477 aa12.81□□□□□ -0.36
UFD1-210ENST00000494054 EIF2S2P20042 333 aaKnown RBP12.81□□□□□ -0.36
UFD1-210ENST00000494054 LMOD3Q0VAK6 560 aa12.81□□□□□ -0.36
UFD1-210ENST00000494054 PDIA6Q15084 440 aa12.81□□□□□ -0.36
UFD1-210ENST00000494054 STYK1Q6J9G0 422 aa12.81□□□□□ -0.36
UFD1-210ENST00000494054 TPTE2Q6XPS3 522 aa12.81□□□□□ -0.36
UFD1-210ENST00000494054 LRP10Q7Z4F1 713 aa12.81□□□□□ -0.36
UFD1-210ENST00000494054 ZBTB3Q9H5J0 574 aa12.81□□□□□ -0.36
UFD1-210ENST00000494054 BABAM1Q9NWV8 329 aa12.81□□□□□ -0.36
UFD1-210ENST00000494054 MAP3K15Q6ZN16 1313 aa12.81□□□□□ -0.36
UFD1-210ENST00000494054 KLRG2A4D1S0 409 aaPredicted RBP12.8□□□□□ -0.36
UFD1-210ENST00000494054 CHL1O00533 1208 aa12.8□□□□□ -0.36
UFD1-210ENST00000494054 ANXA1P04083 346 aa12.8□□□□□ -0.36
UFD1-210ENST00000494054 LMNB1P20700 586 aa12.8□□□□□ -0.36
UFD1-210ENST00000494054 KRT24Q2M2I5 525 aa12.8□□□□□ -0.36
UFD1-210ENST00000494054 PROSER3Q2NL68 480 aa12.8□□□□□ -0.36
UFD1-210ENST00000494054 CNKSR1Q969H4 720 aa12.8□□□□□ -0.36
UFD1-210ENST00000494054 MASTLQ96GX5 879 aa12.8□□□□□ -0.36
UFD1-210ENST00000494054 SLX4Q8IY92 1834 aa12.79□□□□□ -0.36
UFD1-210ENST00000494054 GPTP24298 496 aa12.79□□□□□ -0.36
UFD1-210ENST00000494054 PRPF40BQ6NWY9 871 aaKnown RBP12.79□□□□□ -0.36
UFD1-210ENST00000494054 KIF6Q6ZMV9 814 aa12.79□□□□□ -0.36
UFD1-210ENST00000494054 C7orf43Q8WVR3 580 aa12.79□□□□□ -0.36
UFD1-210ENST00000494054 LAS1LQ9Y4W2 734 aaKnown RBP12.79□□□□□ -0.36
UFD1-210ENST00000494054 ERBB4Q15303 1308 aa12.79□□□□□ -0.36
UFD1-210ENST00000494054 TOMM70O94826 608 aa12.78□□□□□ -0.36
UFD1-210ENST00000494054 NPR1P16066 1061 aa12.78□□□□□ -0.36
UFD1-210ENST00000494054 HSPA6P17066 643 aa12.78□□□□□ -0.36
UFD1-210ENST00000494054 NUTM1Q86Y26 1132 aa12.78□□□□□ -0.36
UFD1-210ENST00000494054 ZNF34Q8IZ26 560 aa12.78□□□□□ -0.36
UFD1-210ENST00000494054 NECTIN2Q92692 538 aa12.78□□□□□ -0.36
UFD1-210ENST00000494054 RRAGCQ9HB90 399 aa12.78□□□□□ -0.36
UFD1-210ENST00000494054 UBN2Q6ZU65 1347 aa12.78□□□□□ -0.36
UFD1-210ENST00000494054 NUP98P52948 1817 aa12.77□□□□□ -0.37
UFD1-210ENST00000494054 GTF2E1P29083 439 aaPredicted RBP12.77□□□□□ -0.37
UFD1-210ENST00000494054 ERFEQ4G0M1 354 aa12.77□□□□□ -0.37
UFD1-210ENST00000494054 CCDC184Q52MB2 194 aa12.77□□□□□ -0.37
UFD1-210ENST00000494054 SUSD4Q5VX71 490 aa12.77□□□□□ -0.37
UFD1-210ENST00000494054 GIGYF2Q6Y7W6 1299 aaKnown RBP12.77□□□□□ -0.37
UFD1-210ENST00000494054 KDM2BQ8NHM5 1336 aa12.77□□□□□ -0.37
UFD1-210ENST00000494054 ABCC12Q96J65 1359 aa12.77□□□□□ -0.37
UFD1-210ENST00000494054 APAF1O14727 1248 aa12.76□□□□□ -0.37
UFD1-210ENST00000494054 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
UFD1-210ENST00000494054 OLFM4Q6UX06 510 aa12.76□□□□□ -0.37
UFD1-210ENST00000494054 ZC3H4Q9UPT8 1303 aaKnown RBP12.76□□□□□ -0.37
UFD1-210ENST00000494054 FER1L6Q2WGJ9 1857 aa12.76□□□□□ -0.37
UFD1-210ENST00000494054 CCDC88AQ3V6T2 1871 aa12.76□□□□□ -0.37
UFD1-210ENST00000494054 GLTPD2A6NH11 291 aa12.75□□□□□ -0.37
UFD1-210ENST00000494054 CACNA1SQ13698 1873 aa12.75□□□□□ -0.37
UFD1-210ENST00000494054 COPS6Q7L5N1 327 aa12.75□□□□□ -0.37
UFD1-210ENST00000494054 NYXQ9GZU5 481 aa12.75□□□□□ -0.37
UFD1-210ENST00000494054 TAOK3Q9H2K8 898 aa12.75□□□□□ -0.37
UFD1-210ENST00000494054 TNRC6CQ9HCJ0 1690 aaKnown RBP12.75□□□□□ -0.37
UFD1-210ENST00000494054 LTBP3Q9NS15 1303 aa12.75□□□□□ -0.37
UFD1-210ENST00000494054 ARFGEF2Q9Y6D5 1785 aa12.74□□□□□ -0.37
UFD1-210ENST00000494054 NTSR2O95665 410 aa12.74□□□□□ -0.37
UFD1-210ENST00000494054 AIMP1Q12904 312 aaKnown RBP12.74□□□□□ -0.37
UFD1-210ENST00000494054 CRY2Q49AN0 593 aa12.74□□□□□ -0.37
UFD1-210ENST00000494054 C3orf67Q6ZVT6 689 aa12.74□□□□□ -0.37
UFD1-210ENST00000494054 RBM46Q8TBY0 533 aaKnown RBP12.74□□□□□ -0.37
UFD1-210ENST00000494054 XAGE3Q8WTP9 111 aa12.74□□□□□ -0.37
UFD1-210ENST00000494054 CFAP44Q96MT7 982 aa12.74□□□□□ -0.37
UFD1-210ENST00000494054 DDX21Q9NR30 783 aaKnown RBP eCLIP12.74□□□□□ -0.37
UFD1-210ENST00000494054 IBTKQ9P2D0 1353 aaPredicted RBP12.73□□□□□ -0.37
UFD1-210ENST00000494054 POTECB2RU33 542 aa12.73□□□□□ -0.37
UFD1-210ENST00000494054 ZNF853P0CG23 659 aa12.73□□□□□ -0.37
UFD1-210ENST00000494054 CCDC93Q567U6 631 aa12.73□□□□□ -0.37
UFD1-210ENST00000494054 SOGA3Q5TF21 947 aa12.73□□□□□ -0.37
UFD1-210ENST00000494054 C16orf71Q8IYS4 520 aaPredicted RBP12.73□□□□□ -0.37
UFD1-210ENST00000494054 MBIPQ9NS73 344 aa12.73□□□□□ -0.37
UFD1-210ENST00000494054 CHPF2Q9P2E5 772 aa12.73□□□□□ -0.37
UFD1-210ENST00000494054 TIAM2Q8IVF5 1701 aa12.73□□□□□ -0.37
UFD1-210ENST00000494054 ALDH1B1P30837 517 aa12.72□□□□□ -0.37
UFD1-210ENST00000494054 HOXA10P31260 410 aaPredicted RBP12.72□□□□□ -0.37
UFD1-210ENST00000494054 PARP10Q53GL7 1025 aa12.72□□□□□ -0.37
UFD1-210ENST00000494054 SLC51AQ86UW1 340 aa12.72□□□□□ -0.37
UFD1-210ENST00000494054 RIC1Q4ADV7 1423 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms