RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 ZNF417Q8TAU3 575 aa8.42□□□□□ -1.06
CLIP4-212ENST00000493551 ZNF587Q96SQ5 575 aaPredicted RBP8.42□□□□□ -1.06
CLIP4-212ENST00000493551 STRN4Q9NRL3 753 aa8.42□□□□□ -1.06
CLIP4-212ENST00000493551 PDS5BQ9NTI5 1447 aa8.41□□□□□ -1.06
CLIP4-212ENST00000493551 ADARB2-AS1A8MUL3 147 aa8.41□□□□□ -1.06
CLIP4-212ENST00000493551 SIN3BO75182 1162 aa8.41□□□□□ -1.06
CLIP4-212ENST00000493551 EIF4G2P78344 907 aaKnown RBP eCLIP8.41□□□□□ -1.06
CLIP4-212ENST00000493551 COL9A3Q14050 684 aaPredicted RBP8.41□□□□□ -1.06
CLIP4-212ENST00000493551 KRTAP9-9Q9BYP9 154 aa8.41□□□□□ -1.06
CLIP4-212ENST00000493551 KRTAP9-4Q9BYQ2 154 aa8.41□□□□□ -1.06
CLIP4-212ENST00000493551 BAZ1AQ9NRL2 1556 aaPredicted RBP8.4□□□□□ -1.06
CLIP4-212ENST00000493551 BICDL1Q6ZP65 573 aa8.4□□□□□ -1.06
CLIP4-212ENST00000493551 CHIC2Q9UKJ5 165 aa8.4□□□□□ -1.06
CLIP4-212ENST00000493551 MROH2BQ7Z745 1585 aa8.39□□□□□ -1.07
CLIP4-212ENST00000493551 MRC2Q9UBG0 1479 aa8.39□□□□□ -1.07
CLIP4-212ENST00000493551 CDK2AP1O14519 115 aa8.39□□□□□ -1.07
CLIP4-212ENST00000493551 KRTAP19-1Q8IUB9 90 aa8.39□□□□□ -1.07
CLIP4-212ENST00000493551 GOLGA2P5Q9HBQ8 144 aa8.39□□□□□ -1.07
CLIP4-212ENST00000493551 IQSEC3Q9UPP2 1182 aaPredicted RBP8.39□□□□□ -1.07
CLIP4-212ENST00000493551 C9orf172C9J069 976 aa8.38□□□□□ -1.07
CLIP4-212ENST00000493551 MTFR1Q15390 333 aa8.38□□□□□ -1.07
CLIP4-212ENST00000493551 GRIK4Q16099 956 aa8.38□□□□□ -1.07
CLIP4-212ENST00000493551 TNFRSF25Q93038 417 aa8.38□□□□□ -1.07
CLIP4-212ENST00000493551 CABP1Q9NZU7 370 aa8.38□□□□□ -1.07
CLIP4-212ENST00000493551 A6NJY4 79 aa8.37□□□□□ -1.07
CLIP4-212ENST00000493551 HYAL3O43820 417 aaPredicted RBP8.37□□□□□ -1.07
CLIP4-212ENST00000493551 ALBP02768 609 aa8.37□□□□□ -1.07
CLIP4-212ENST00000493551 NID1P14543 1247 aa8.37□□□□□ -1.07
CLIP4-212ENST00000493551 MICALL1Q8N3F8 863 aa8.37□□□□□ -1.07
CLIP4-212ENST00000493551 SLC4A9Q96Q91 983 aa8.37□□□□□ -1.07
CLIP4-212ENST00000493551 SERTAD1Q9UHV2 236 aa8.37□□□□□ -1.07
CLIP4-212ENST00000493551 STARD13Q9Y3M8 1113 aa8.37□□□□□ -1.07
CLIP4-212ENST00000493551 ADGRE1Q14246 886 aa8.36□□□□□ -1.07
CLIP4-212ENST00000493551 MAP7D1Q3KQU3 841 aa8.35□□□□□ -1.07
CLIP4-212ENST00000493551 USP3Q9Y6I4 520 aa8.35□□□□□ -1.07
CLIP4-212ENST00000493551 CADPSQ9ULU8 1353 aa8.35□□□□□ -1.07
CLIP4-212ENST00000493551 WDR62O43379 1518 aa8.34□□□□□ -1.07
CLIP4-212ENST00000493551 TMEM229AB2RXF0 380 aa8.34□□□□□ -1.07
CLIP4-212ENST00000493551 ADH7P40394 386 aa8.34□□□□□ -1.07
CLIP4-212ENST00000493551 NEUROD1Q13562 356 aa8.34□□□□□ -1.07
CLIP4-212ENST00000493551 MBTPS1Q14703 1052 aa8.34□□□□□ -1.07
CLIP4-212ENST00000493551 C8orf86Q6ZUL3 223 aa8.34□□□□□ -1.07
CLIP4-212ENST00000493551 TXNRD3Q86VQ6 643 aa8.34□□□□□ -1.07
CLIP4-212ENST00000493551 NRG1Q02297 640 aaPredicted RBP8.33□□□□□ -1.08
CLIP4-212ENST00000493551 SNRKQ9NRH2 765 aa8.33□□□□□ -1.08
CLIP4-212ENST00000493551 CEP164Q9UPV0 1460 aa8.32□□□□□ -1.08
CLIP4-212ENST00000493551 PEG3Q9GZU2 1588 aa8.32□□□□□ -1.08
CLIP4-212ENST00000493551 KRTAP4-8A0A0G2JLE6 195 aa8.32□□□□□ -1.08
CLIP4-212ENST00000493551 ELNP15502 786 aa8.32□□□□□ -1.08
CLIP4-212ENST00000493551 TXLNAP40222 546 aa8.32□□□□□ -1.08
CLIP4-212ENST00000493551 TRAPPC3LQ5T215 181 aa8.32□□□□□ -1.08
CLIP4-212ENST00000493551 SLC30A3Q99726 388 aa8.32□□□□□ -1.08
CLIP4-212ENST00000493551 PARP3Q9Y6F1 533 aa8.32□□□□□ -1.08
CLIP4-212ENST00000493551 SELPP16109 830 aa8.31□□□□□ -1.08
CLIP4-212ENST00000493551 LRRC69Q6ZNQ3 347 aa8.31□□□□□ -1.08
CLIP4-212ENST00000493551 C20orf204Q6ZNR8 217 aa8.31□□□□□ -1.08
CLIP4-212ENST00000493551 PLPP7Q8NBV4 271 aa8.31□□□□□ -1.08
CLIP4-212ENST00000493551 LENG1Q96BZ8 264 aaPredicted RBP8.31□□□□□ -1.08
CLIP4-212ENST00000493551 GPC6Q9Y625 555 aaPredicted RBP8.31□□□□□ -1.08
CLIP4-212ENST00000493551 LILRB5O75023 590 aa8.3□□□□□ -1.08
CLIP4-212ENST00000493551 NEUROD4Q9HD90 331 aa8.3□□□□□ -1.08
CLIP4-212ENST00000493551 PRM3Q9NNZ6 103 aa8.3□□□□□ -1.08
CLIP4-212ENST00000493551 FANCD2Q9BXW9 1451 aa8.3□□□□□ -1.08
CLIP4-212ENST00000493551 WIZO95785 1651 aa8.3□□□□□ -1.08
CLIP4-212ENST00000493551 RIMBP3CA6NJZ7 1639 aa8.29□□□□□ -1.08
CLIP4-212ENST00000493551 RIMBP3BA6NNM3 1639 aa8.29□□□□□ -1.08
CLIP4-212ENST00000493551 RIMBP3Q9UFD9 1639 aa8.29□□□□□ -1.08
CLIP4-212ENST00000493551 A0A0A0MRY4 1105 aa8.29□□□□□ -1.08
CLIP4-212ENST00000493551 BACH1O14867 736 aa8.29□□□□□ -1.08
CLIP4-212ENST00000493551 SPEM2Q0P670 501 aa8.29□□□□□ -1.08
CLIP4-212ENST00000493551 SFSWAPQ12872 951 aaKnown RBP8.29□□□□□ -1.08
CLIP4-212ENST00000493551 TP53INP1Q96A56 240 aa8.29□□□□□ -1.08
CLIP4-212ENST00000493551 TBC1D2BQ9UPU7 963 aa8.29□□□□□ -1.08
CLIP4-212ENST00000493551 EML1O00423 815 aa8.28□□□□□ -1.08
CLIP4-212ENST00000493551 RAC1P63000 192 aa8.28□□□□□ -1.08
CLIP4-212ENST00000493551 IL27Q8NEV9 243 aa8.28□□□□□ -1.08
CLIP4-212ENST00000493551 L3MBTL2Q969R5 705 aa8.28□□□□□ -1.08
CLIP4-212ENST00000493551 SCHIP1Q9P0W5 487 aaPredicted RBP8.28□□□□□ -1.08
CLIP4-212ENST00000493551 TEAD4Q15561 434 aa8.27□□□□□ -1.09
CLIP4-212ENST00000493551 MCTP1Q6DN14 999 aa8.27□□□□□ -1.09
CLIP4-212ENST00000493551 ZDHHC1Q8WTX9 485 aa8.27□□□□□ -1.09
CLIP4-212ENST00000493551 IRF5Q13568 498 aa8.26□□□□□ -1.09
CLIP4-212ENST00000493551 RAB44Q7Z6P3 723 aaPredicted RBP8.26□□□□□ -1.09
CLIP4-212ENST00000493551 URB2Q14146 1524 aaKnown RBP8.25□□□□□ -1.09
CLIP4-212ENST00000493551 NOS2P35228 1153 aa8.25□□□□□ -1.09
CLIP4-212ENST00000493551 CYB5RLQ6IPT4 315 aa8.25□□□□□ -1.09
CLIP4-212ENST00000493551 SSBP4Q9BWG4 385 aaPredicted RBP8.25□□□□□ -1.09
CLIP4-212ENST00000493551 RNF112Q9ULX5 631 aa8.25□□□□□ -1.09
CLIP4-212ENST00000493551 SHISA2Q6UWI4 295 aa8.24□□□□□ -1.09
CLIP4-212ENST00000493551 BRD7Q9NPI1 651 aa8.24□□□□□ -1.09
CLIP4-212ENST00000493551 USP21Q9UK80 565 aa8.24□□□□□ -1.09
CLIP4-212ENST00000493551 PCDHGA11Q9Y5H2 935 aa8.24□□□□□ -1.09
CLIP4-212ENST00000493551 KCNQ4P56696 695 aa8.23□□□□□ -1.09
CLIP4-212ENST00000493551 VAC14Q08AM6 782 aa8.23□□□□□ -1.09
CLIP4-212ENST00000493551 RHPN1Q8TCX5 695 aa8.23□□□□□ -1.09
CLIP4-212ENST00000493551 C7orf43Q8WVR3 580 aa8.23□□□□□ -1.09
CLIP4-212ENST00000493551 ZNF232Q9UNY5 417 aa8.23□□□□□ -1.09
CLIP4-212ENST00000493551 ARHGEF11O15085 1522 aa8.23□□□□□ -1.09
CLIP4-212ENST00000493551 ZNF608Q9ULD9 1512 aaPredicted RBP8.23□□□□□ -1.09
CLIP4-212ENST00000493551 JPH1Q9HDC5 661 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms