RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 CHRNA5P30532 468 aa15.04■□□□□ -0
CTSA-209ENST00000493522 CANXP27824 592 aaKnown RBP15.03■□□□□ -0
CTSA-209ENST00000493522 TM4SF1P30408 202 aa15.03■□□□□ -0
CTSA-209ENST00000493522 FSTL1Q12841 308 aa15.03■□□□□ -0
CTSA-209ENST00000493522 USPL1Q5W0Q7 1092 aa15.03■□□□□ -0
CTSA-209ENST00000493522 DNAJC5GQ8N7S2 189 aa15.03■□□□□ -0
CTSA-209ENST00000493522 ZNF330Q9Y3S2 320 aaPredicted RBP15.03■□□□□ -0
CTSA-209ENST00000493522 USP16Q9Y5T5 823 aa15.03■□□□□ -0
CTSA-209ENST00000493522 NUP98P52948 1817 aa15.03■□□□□ -0
CTSA-209ENST00000493522 ANKRD36CQ5JPF3 1778 aa15.03■□□□□ -0
CTSA-209ENST00000493522 KRT24Q2M2I5 525 aa15.02■□□□□ -0
CTSA-209ENST00000493522 WDR63Q8IWG1 891 aa15.02■□□□□ -0
CTSA-209ENST00000493522 TSR2Q969E8 191 aaKnown RBP15.02■□□□□ -0
CTSA-209ENST00000493522 FANCIQ9NVI1 1328 aa15.01□□□□□ -0.01
CTSA-209ENST00000493522 ZC3H4Q9UPT8 1303 aaKnown RBP15.01□□□□□ -0.01
CTSA-209ENST00000493522 A1BGP04217 495 aa15.01□□□□□ -0.01
CTSA-209ENST00000493522 PIP4K2AP48426 406 aaPredicted RBP15.01□□□□□ -0.01
CTSA-209ENST00000493522 NARFQ9UHQ1 456 aa15.01□□□□□ -0.01
CTSA-209ENST00000493522 WDR90Q96KV7 1748 aa15□□□□□ -0.01
CTSA-209ENST00000493522 ZNF521Q96K83 1311 aa15□□□□□ -0.01
CTSA-209ENST00000493522 NFIXQ14938 502 aa15□□□□□ -0.01
CTSA-209ENST00000493522 AFDNP55196 1824 aaKnown RBP15□□□□□ -0.01
CTSA-209ENST00000493522 ARFGEF2Q9Y6D5 1785 aa15□□□□□ -0.01
CTSA-209ENST00000493522 EIF2S2P20042 333 aaKnown RBP14.99□□□□□ -0.01
CTSA-209ENST00000493522 HNRNPUQ00839 825 aaKnown RBP eCLIP14.99□□□□□ -0.01
CTSA-209ENST00000493522 NPM2Q86SE8 214 aaKnown RBP14.99□□□□□ -0.01
CTSA-209ENST00000493522 NECTIN2Q92692 538 aa14.99□□□□□ -0.01
CTSA-209ENST00000493522 RRAGCQ9HB90 399 aa14.99□□□□□ -0.01
CTSA-209ENST00000493522 TNRC6CQ9HCJ0 1690 aaKnown RBP14.99□□□□□ -0.01
CTSA-209ENST00000493522 IL6STP40189 918 aaPredicted RBP14.98□□□□□ -0.01
CTSA-209ENST00000493522 DUSP27Q5VZP5 1158 aa14.98□□□□□ -0.01
CTSA-209ENST00000493522 KLRG1Q96E93 195 aa14.98□□□□□ -0.01
CTSA-209ENST00000493522 MYH16Q9H6N6 1097 aa14.98□□□□□ -0.01
CTSA-209ENST00000493522 ERBB4Q15303 1308 aa14.97□□□□□ -0.01
CTSA-209ENST00000493522 A0A087WZG4 1122 aa14.97□□□□□ -0.01
CTSA-209ENST00000493522 NBPF26B4DH59 902 aa14.97□□□□□ -0.01
CTSA-209ENST00000493522 ELL2O00472 640 aaPredicted RBP14.97□□□□□ -0.01
CTSA-209ENST00000493522 SERPINB2P05120 415 aa14.97□□□□□ -0.01
CTSA-209ENST00000493522 HOXB7P09629 217 aa14.97□□□□□ -0.01
CTSA-209ENST00000493522 LMNB1P20700 586 aa14.97□□□□□ -0.01
CTSA-209ENST00000493522 EIF5P55010 431 aaKnown RBP14.97□□□□□ -0.01
CTSA-209ENST00000493522 RASSF7Q02833 373 aa14.97□□□□□ -0.01
CTSA-209ENST00000493522 GOLGA2Q08379 1002 aa14.97□□□□□ -0.01
CTSA-209ENST00000493522 HDGFL1Q5TGJ6 251 aa14.97□□□□□ -0.01
CTSA-209ENST00000493522 NBPF10Q6P3W6 841 aaKnown RBP14.97□□□□□ -0.01
CTSA-209ENST00000493522 NBPF15Q8N660 670 aa14.97□□□□□ -0.01
CTSA-209ENST00000493522 SMC1BQ8NDV3 1235 aa14.97□□□□□ -0.01
CTSA-209ENST00000493522 SPINK5Q9NQ38 1064 aaPredicted RBP14.97□□□□□ -0.01
CTSA-209ENST00000493522 MYL6BP14649 208 aa14.96□□□□□ -0.01
CTSA-209ENST00000493522 TTLL6Q8N841 843 aa14.96□□□□□ -0.01
CTSA-209ENST00000493522 C8orf58Q8NAV2 365 aa14.96□□□□□ -0.01
CTSA-209ENST00000493522 NRXN2Q9P2S2 1712 aa14.96□□□□□ -0.01
CTSA-209ENST00000493522 H0YIN7 160 aa14.95□□□□□ -0.02
CTSA-209ENST00000493522 HTRA3P83110 453 aa14.95□□□□□ -0.02
CTSA-209ENST00000493522 C2CD5Q86YS7 1000 aa14.95□□□□□ -0.02
CTSA-209ENST00000493522 JMYQ8N9B5 988 aa14.95□□□□□ -0.02
CTSA-209ENST00000493522 BCL2L12Q9HB09 334 aa14.95□□□□□ -0.02
CTSA-209ENST00000493522 SBF1O95248 1867 aa14.95□□□□□ -0.02
CTSA-209ENST00000493522 DLEC1Q9Y238 1755 aa14.94□□□□□ -0.02
CTSA-209ENST00000493522 GLTPD2A6NH11 291 aa14.94□□□□□ -0.02
CTSA-209ENST00000493522 E9PSI1 815 aa14.94□□□□□ -0.02
CTSA-209ENST00000493522 ANXA1P04083 346 aa14.94□□□□□ -0.02
CTSA-209ENST00000493522 EXOSC9Q06265 439 aaKnown RBP14.94□□□□□ -0.02
CTSA-209ENST00000493522 TWISTNBQ3B726 338 aaPredicted RBP14.94□□□□□ -0.02
CTSA-209ENST00000493522 DZIP3Q86Y13 1208 aaKnown RBP14.94□□□□□ -0.02
CTSA-209ENST00000493522 CHPF2Q9P2E5 772 aa14.94□□□□□ -0.02
CTSA-209ENST00000493522 TBC1D2BQ9UPU7 963 aa14.94□□□□□ -0.02
CTSA-209ENST00000493522 VEGFAP15692 232 aaPredicted RBP14.93□□□□□ -0.02
CTSA-209ENST00000493522 PROSER3Q2NL68 480 aa14.93□□□□□ -0.02
CTSA-209ENST00000493522 TSPYL6Q8N831 410 aa14.93□□□□□ -0.02
CTSA-209ENST00000493522 PDZRN3Q9UPQ7 1066 aa14.93□□□□□ -0.02
CTSA-209ENST00000493522 KIF6Q6ZMV9 814 aa14.92□□□□□ -0.02
CTSA-209ENST00000493522 BICDL1Q6ZP65 573 aa14.92□□□□□ -0.02
CTSA-209ENST00000493522 CDCA7LQ96GN5 454 aa14.92□□□□□ -0.02
CTSA-209ENST00000493522 CARMIL3Q8ND23 1372 aa14.92□□□□□ -0.02
CTSA-209ENST00000493522 SLFN5Q08AF3 891 aa14.91□□□□□ -0.02
CTSA-209ENST00000493522 DDX21Q9NR30 783 aaKnown RBP eCLIP14.91□□□□□ -0.02
CTSA-209ENST00000493522 DBF4Q9UBU7 674 aaPredicted RBP14.91□□□□□ -0.02
CTSA-209ENST00000493522 ANKRD31Q8N7Z5 1873 aa14.91□□□□□ -0.02
CTSA-209ENST00000493522 ZBED9Q6R2W3 1325 aa14.91□□□□□ -0.02
CTSA-209ENST00000493522 TIAM2Q8IVF5 1701 aa14.9□□□□□ -0.02
CTSA-209ENST00000493522 NFKBIEO00221 500 aa14.9□□□□□ -0.02
CTSA-209ENST00000493522 CAMTA2O94983 1202 aa14.9□□□□□ -0.02
CTSA-209ENST00000493522 PDE6BP35913 854 aa14.9□□□□□ -0.02
CTSA-209ENST00000493522 PDIA6Q15084 440 aa14.9□□□□□ -0.02
CTSA-209ENST00000493522 CCDC30Q5VVM6 783 aa14.9□□□□□ -0.02
CTSA-209ENST00000493522 TTLL7Q6ZT98 887 aa14.9□□□□□ -0.02
CTSA-209ENST00000493522 BRIP1Q9BX63 1249 aa14.9□□□□□ -0.02
CTSA-209ENST00000493522 CHMP4AQ9BY43 222 aa14.9□□□□□ -0.02
CTSA-209ENST00000493522 CACNA1SQ13698 1873 aa14.9□□□□□ -0.02
CTSA-209ENST00000493522 TCERG1O14776 1098 aaKnown RBP14.89□□□□□ -0.03
CTSA-209ENST00000493522 PRELPP51888 382 aa14.89□□□□□ -0.03
CTSA-209ENST00000493522 AIMP1Q12904 312 aaKnown RBP14.89□□□□□ -0.03
CTSA-209ENST00000493522 TBC1D9BQ66K14 1250 aa14.89□□□□□ -0.03
CTSA-209ENST00000493522 DPY19L2Q6NUT2 758 aa14.89□□□□□ -0.03
CTSA-209ENST00000493522 ZNF622Q969S3 477 aaKnown RBP eCLIP14.89□□□□□ -0.037e-8■□□□□ 9.1
CTSA-209ENST00000493522 STK31Q9BXU1 1019 aa14.89□□□□□ -0.03
CTSA-209ENST00000493522 ZBTB3Q9H5J0 574 aa14.89□□□□□ -0.03
CTSA-209ENST00000493522 ZNF652Q9Y2D9 606 aa14.89□□□□□ -0.03
CTSA-209ENST00000493522 MAP3K15Q6ZN16 1313 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms