RNA–Protein interactions for RNA: ENST00000493470.2

ATRX-207, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 2,967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-207ENST00000493470 MIA2Q96PC5 1412 aa4.31□□□□□ -1.72
ATRX-207ENST00000493470 RIMS1Q86UR5 1692 aaKnown RBP4.31□□□□□ -1.72
ATRX-207ENST00000493470 ANKRD62A6NC57 917 aa4.31□□□□□ -1.72
ATRX-207ENST00000493470 BAP1Q92560 729 aa4.31□□□□□ -1.72
ATRX-207ENST00000493470 DRC1Q96MC2 740 aa4.31□□□□□ -1.72
ATRX-207ENST00000493470 LAMC1P11047 1609 aa4.31□□□□□ -1.72
ATRX-207ENST00000493470 MROH1Q8NDA8 1641 aa4.31□□□□□ -1.72
ATRX-207ENST00000493470 MYO3AQ8NEV4 1616 aa4.31□□□□□ -1.72
ATRX-207ENST00000493470 STRCQ7RTU9 1775 aa4.31□□□□□ -1.72
ATRX-207ENST00000493470 SPATA31D1Q6ZQQ2 1576 aa4.31□□□□□ -1.72
ATRX-207ENST00000493470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.31□□□□□ -1.72
ATRX-207ENST00000493470 POM121Q96HA1 1249 aa4.31□□□□□ -1.72
ATRX-207ENST00000493470 DNAJC2Q99543 621 aaKnown RBP4.31□□□□□ -1.72
ATRX-207ENST00000493470 HIRIP3Q9BW71 556 aaPredicted RBP4.31□□□□□ -1.72
ATRX-207ENST00000493470 NWD1Q149M9 1564 aa4.31□□□□□ -1.72
ATRX-207ENST00000493470 TPD52L2O43399 206 aaKnown RBP4.3□□□□□ -1.72
ATRX-207ENST00000493470 F12P00748 615 aaPredicted RBP4.3□□□□□ -1.72
ATRX-207ENST00000493470 YBX3P16989 372 aaKnown RBP eCLIP4.3□□□□□ -1.72
ATRX-207ENST00000493470 PTMSP20962 102 aa4.3□□□□□ -1.72
ATRX-207ENST00000493470 RNF144AP50876 292 aaPredicted RBP4.3□□□□□ -1.72
ATRX-207ENST00000493470 AMHR2Q16671 573 aa4.3□□□□□ -1.72
ATRX-207ENST00000493470 GPATCH11Q8N954 259 aa4.3□□□□□ -1.72
ATRX-207ENST00000493470 DNMT3LQ9UJW3 386 aa4.3□□□□□ -1.72
ATRX-207ENST00000493470 TIAM1Q13009 1591 aa4.3□□□□□ -1.72
ATRX-207ENST00000493470 DIP2AQ14689 1571 aa4.3□□□□□ -1.72
ATRX-207ENST00000493470 PRDM15P57071 1507 aaPredicted RBP4.3□□□□□ -1.72
ATRX-207ENST00000493470 VEGFBP49765 207 aa4.3□□□□□ -1.72
ATRX-207ENST00000493470 FAM43BQ6ZT52 329 aaPredicted RBP4.3□□□□□ -1.72
ATRX-207ENST00000493470 TMTC2Q8N394 836 aa4.3□□□□□ -1.72
ATRX-207ENST00000493470 MYH16Q9H6N6 1097 aa4.3□□□□□ -1.72
ATRX-207ENST00000493470 AVENQ9NQS1 362 aaPredicted RBP4.3□□□□□ -1.72
ATRX-207ENST00000493470 FAM217BQ9NTX9 383 aaPredicted RBP4.3□□□□□ -1.72
ATRX-207ENST00000493470 GRM5P41594 1212 aa4.29□□□□□ -1.72
ATRX-207ENST00000493470 SND1Q7KZF4 910 aaKnown RBP eCLIP4.29□□□□□ -1.72
ATRX-207ENST00000493470 LAS1LQ9Y4W2 734 aaKnown RBP4.29□□□□□ -1.72
ATRX-207ENST00000493470 ADGRL2O95490 1459 aa4.29□□□□□ -1.72
ATRX-207ENST00000493470 ATP7AQ04656 1500 aa4.29□□□□□ -1.72
ATRX-207ENST00000493470 IQGAP3Q86VI3 1631 aa4.29□□□□□ -1.72
ATRX-207ENST00000493470 OIP5O43482 229 aa4.29□□□□□ -1.72
ATRX-207ENST00000493470 FAM50AQ14320 339 aaKnown RBP4.29□□□□□ -1.72
ATRX-207ENST00000493470 ZNF662Q6ZS27 426 aa4.29□□□□□ -1.72
ATRX-207ENST00000493470 TRERF1Q96PN7 1200 aa4.29□□□□□ -1.72
ATRX-207ENST00000493470 PHF24Q9UPV7 400 aa4.29□□□□□ -1.72
ATRX-207ENST00000493470 NLRP1Q9C000 1473 aa4.29□□□□□ -1.72
ATRX-207ENST00000493470 GCC2Q8IWJ2 1684 aa4.29□□□□□ -1.72
ATRX-207ENST00000493470 NCOA3Q9Y6Q9 1424 aa4.29□□□□□ -1.72
ATRX-207ENST00000493470 MCCP23508 829 aa4.29□□□□□ -1.72
ATRX-207ENST00000493470 RBM10P98175 930 aaKnown RBP4.29□□□□□ -1.72
ATRX-207ENST00000493470 FAM69CQ0P6D2 419 aa4.29□□□□□ -1.72
ATRX-207ENST00000493470 PPP2R2DQ66LE6 453 aa4.29□□□□□ -1.72
ATRX-207ENST00000493470 SPTY2D1Q68D10 685 aaPredicted RBP4.29□□□□□ -1.72
ATRX-207ENST00000493470 SREK1Q8WXA9 508 aaKnown RBP4.29□□□□□ -1.72
ATRX-207ENST00000493470 LTBP4Q8N2S1 1624 aa4.28□□□□□ -1.72
ATRX-207ENST00000493470 PPP1R15AO75807 674 aaPredicted RBP4.28□□□□□ -1.72
ATRX-207ENST00000493470 ITGB2P05107 769 aa4.28□□□□□ -1.72
ATRX-207ENST00000493470 MDM2Q00987 491 aaPredicted RBP4.28□□□□□ -1.72
ATRX-207ENST00000493470 SH3RF1Q7Z6J0 888 aa4.28□□□□□ -1.72
ATRX-207ENST00000493470 CCDC116Q8IYX3 515 aa4.28□□□□□ -1.72
ATRX-207ENST00000493470 PNMA1Q8ND90 353 aa4.28□□□□□ -1.72
ATRX-207ENST00000493470 UNC13BO14795 1591 aa4.28□□□□□ -1.72
ATRX-207ENST00000493470 SLIT1O75093 1534 aa4.28□□□□□ -1.72
ATRX-207ENST00000493470 UGGT1Q9NYU2 1555 aa4.28□□□□□ -1.72
ATRX-207ENST00000493470 MICAL1Q8TDZ2 1067 aa4.28□□□□□ -1.72
ATRX-207ENST00000493470 RPRD2Q5VT52 1461 aaKnown RBP4.28□□□□□ -1.73
ATRX-207ENST00000493470 FDX1P10109 184 aa4.27□□□□□ -1.73
ATRX-207ENST00000493470 ARTNQ5T4W7 220 aa4.27□□□□□ -1.73
ATRX-207ENST00000493470 GIMAP6Q6P9H5 292 aa4.27□□□□□ -1.73
ATRX-207ENST00000493470 KRI1Q8N9T8 703 aaKnown RBP4.27□□□□□ -1.73
ATRX-207ENST00000493470 MRRFQ96E11 262 aaKnown RBP4.27□□□□□ -1.73
ATRX-207ENST00000493470 ABCC3O15438 1527 aa4.27□□□□□ -1.73
ATRX-207ENST00000493470 MTMR2Q13614 643 aa4.27□□□□□ -1.73
ATRX-207ENST00000493470 TXNDC2Q86VQ3 553 aa4.27□□□□□ -1.73
ATRX-207ENST00000493470 C8orf37Q96NL8 207 aa4.27□□□□□ -1.73
ATRX-207ENST00000493470 IVNS1ABPQ9Y6Y0 642 aa4.27□□□□□ -1.73
ATRX-207ENST00000493470 PZPP20742 1482 aa4.27□□□□□ -1.73
ATRX-207ENST00000493470 PIK3C2BO00750 1634 aa4.27□□□□□ -1.73
ATRX-207ENST00000493470 SPDYE3A6NKU9 549 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 VWA5B2Q8N398 1253 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 DDRGK1Q96HY6 314 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 FMNL2Q96PY5 1086 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 ERBINQ96RT1 1412 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 A2ML1A8K2U0 1454 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 MBD5Q9P267 1494 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 DNMT1P26358 1616 aaKnown RBP4.26□□□□□ -1.73
ATRX-207ENST00000493470 EFCAB6Q5THR3 1501 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 DUOX2Q9NRD8 1548 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 GPATCH8Q9UKJ3 1502 aaKnown RBP4.26□□□□□ -1.73
ATRX-207ENST00000493470 GORABQ5T7V8 394 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 SEPT12Q8IYM1 358 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 GOLGA6L1Q8N7Z2 621 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 NLRP7Q8WX94 980 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 GOPCQ9HD26 462 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 ARHGAP23Q9P227 1491 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 NCOA1Q15788 1441 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 TRAPPC8Q9Y2L5 1435 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 RAB11FIP3O75154 756 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 FOXD4L6Q3SYB3 417 aaPredicted RBP4.26□□□□□ -1.73
ATRX-207ENST00000493470 FOXD4L3Q6VB84 417 aaPredicted RBP4.26□□□□□ -1.73
ATRX-207ENST00000493470 SH3BP5LQ7L8J4 393 aa4.26□□□□□ -1.73
ATRX-207ENST00000493470 NME8Q8N427 588 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms