RNA–Protein interactions for RNA: ENST00000493156.6

RFC2-210, Transcript of replication factor C subunit 2, humanhuman

TSL 5

Gene RFC2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-210ENST00000493156 NMRK2Q9NPI5 230 aa25.89■■□□□ 1.74
RFC2-210ENST00000493156 FER1L6Q2WGJ9 1857 aa25.89■■□□□ 1.73
RFC2-210ENST00000493156 NFKBIEO00221 500 aa25.88■■□□□ 1.73
RFC2-210ENST00000493156 TMPOP42166 694 aaKnown RBP25.88■■□□□ 1.73
RFC2-210ENST00000493156 PRELPP51888 382 aa25.88■■□□□ 1.73
RFC2-210ENST00000493156 RIPK4P57078 832 aa25.88■■□□□ 1.73
RFC2-210ENST00000493156 ZNF622Q969S3 477 aaKnown RBP eCLIP25.88■■□□□ 1.73
RFC2-210ENST00000493156 NPHP1O15259 732 aa25.87■■□□□ 1.73
RFC2-210ENST00000493156 SRGNP10124 158 aa25.87■■□□□ 1.73
RFC2-210ENST00000493156 HSPA6P17066 643 aa25.87■■□□□ 1.73
RFC2-210ENST00000493156 LMNB1P20700 586 aa25.87■■□□□ 1.73
RFC2-210ENST00000493156 LMOD3Q0VAK6 560 aa25.87■■□□□ 1.73
RFC2-210ENST00000493156 STYK1Q6J9G0 422 aa25.87■■□□□ 1.73
RFC2-210ENST00000493156 NBPF5PQ86XG9 351 aaPredicted RBP25.87■■□□□ 1.73
RFC2-210ENST00000493156 BABAM1Q9NWV8 329 aa25.87■■□□□ 1.73
RFC2-210ENST00000493156 CACNA1SQ13698 1873 aa25.87■■□□□ 1.73
RFC2-210ENST00000493156 ERBB4Q15303 1308 aa25.87■■□□□ 1.73
RFC2-210ENST00000493156 NUP98P52948 1817 aa25.86■■□□□ 1.73
RFC2-210ENST00000493156 CCDC88AQ3V6T2 1871 aa25.86■■□□□ 1.73
RFC2-210ENST00000493156 TOMM70O94826 608 aa25.86■■□□□ 1.73
RFC2-210ENST00000493156 NIP7Q9Y221 180 aaKnown RBP eCLIP25.86■■□□□ 1.73
RFC2-210ENST00000493156 SLX4Q8IY92 1834 aa25.86■■□□□ 1.73
RFC2-210ENST00000493156 KDM2BQ8NHM5 1336 aa25.86■■□□□ 1.73
RFC2-210ENST00000493156 HLFQ16534 295 aa25.85■■□□□ 1.73
RFC2-210ENST00000493156 CNKSR1Q969H4 720 aa25.85■■□□□ 1.73
RFC2-210ENST00000493156 TSPYL4Q9UJ04 414 aa25.85■■□□□ 1.73
RFC2-210ENST00000493156 KLRG2A4D1S0 409 aaPredicted RBP25.84■■□□□ 1.73
RFC2-210ENST00000493156 ERVV-1B6SEH8 477 aa25.84■■□□□ 1.73
RFC2-210ENST00000493156 MASTLQ96GX5 879 aa25.84■■□□□ 1.73
RFC2-210ENST00000493156 MAP3K15Q6ZN16 1313 aa25.84■■□□□ 1.73
RFC2-210ENST00000493156 DICER1Q9UPY3 1922 aaKnown RBP25.83■■□□□ 1.73
RFC2-210ENST00000493156 TPTE2Q6XPS3 522 aa25.83■■□□□ 1.73
RFC2-210ENST00000493156 C21orf2O43822 256 aa25.82■■□□□ 1.72
RFC2-210ENST00000493156 PRKRIP1Q9H875 184 aaPredicted RBP25.82■■□□□ 1.72
RFC2-210ENST00000493156 LTBP3Q9NS15 1303 aa25.82■■□□□ 1.72
RFC2-210ENST00000493156 PRPF40BQ6NWY9 871 aaKnown RBP25.81■■□□□ 1.72
RFC2-210ENST00000493156 RUNDC1Q96C34 613 aa25.81■■□□□ 1.72
RFC2-210ENST00000493156 RRP7AQ9Y3A4 280 aaKnown RBP25.81■■□□□ 1.72
RFC2-210ENST00000493156 IBTKQ9P2D0 1353 aaPredicted RBP25.81■■□□□ 1.72
RFC2-210ENST00000493156 TTLL7Q6ZT98 887 aa25.8■■□□□ 1.72
RFC2-210ENST00000493156 CCDC146Q8IYE0 955 aa25.8■■□□□ 1.72
RFC2-210ENST00000493156 WDR43Q15061 677 aaKnown RBP eCLIP25.79■■□□□ 1.72
RFC2-210ENST00000493156 KIF6Q6ZMV9 814 aa25.79■■□□□ 1.72
RFC2-210ENST00000493156 LRP10Q7Z4F1 713 aa25.79■■□□□ 1.72
RFC2-210ENST00000493156 NGEFQ8N5V2 710 aa25.79■■□□□ 1.72
RFC2-210ENST00000493156 RBM46Q8TBY0 533 aaKnown RBP25.79■■□□□ 1.72
RFC2-210ENST00000493156 RIC1Q4ADV7 1423 aa25.79■■□□□ 1.72
RFC2-210ENST00000493156 MYL6BP14649 208 aa25.78■■□□□ 1.72
RFC2-210ENST00000493156 NPR1P16066 1061 aa25.78■■□□□ 1.72
RFC2-210ENST00000493156 SOGA3Q5TF21 947 aa25.78■■□□□ 1.72
RFC2-210ENST00000493156 CEP350Q5VT06 3117 aa25.77■■□□□ 1.72
RFC2-210ENST00000493156 GLTPD2A6NH11 291 aa25.77■■□□□ 1.72
RFC2-210ENST00000493156 ZNF219Q9P2Y4 722 aaPredicted RBP25.77■■□□□ 1.72
RFC2-210ENST00000493156 ADAMTS8Q9UP79 889 aa25.77■■□□□ 1.72
RFC2-210ENST00000493156 TRIM35Q9UPQ4 493 aa25.77■■□□□ 1.72
RFC2-210ENST00000493156 PDIA6Q15084 440 aa25.76■■□□□ 1.71
RFC2-210ENST00000493156 C7orf43Q8WVR3 580 aa25.76■■□□□ 1.71
RFC2-210ENST00000493156 NYXQ9GZU5 481 aa25.76■■□□□ 1.71
RFC2-210ENST00000493156 TAOK3Q9H2K8 898 aa25.76■■□□□ 1.71
RFC2-210ENST00000493156 ABCC12Q96J65 1359 aa25.76■■□□□ 1.71
RFC2-210ENST00000493156 UBN2Q6ZU65 1347 aa25.75■■□□□ 1.71
RFC2-210ENST00000493156 FAM177BA6PVY3 158 aa25.75■■□□□ 1.71
RFC2-210ENST00000493156 ZBTB3Q9H5J0 574 aa25.75■■□□□ 1.71
RFC2-210ENST00000493156 RRAGCQ9HB90 399 aa25.75■■□□□ 1.71
RFC2-210ENST00000493156 WDR90Q96KV7 1748 aa25.74■■□□□ 1.71
RFC2-210ENST00000493156 CHL1O00533 1208 aa25.74■■□□□ 1.71
RFC2-210ENST00000493156 C16orf71Q8IYS4 520 aaPredicted RBP25.74■■□□□ 1.71
RFC2-210ENST00000493156 NEUROD2Q15784 382 aa25.73■■□□□ 1.71
RFC2-210ENST00000493156 CRY2Q49AN0 593 aa25.73■■□□□ 1.71
RFC2-210ENST00000493156 GIGYF2Q6Y7W6 1299 aaKnown RBP25.73■■□□□ 1.71
RFC2-210ENST00000493156 ZNF34Q8IZ26 560 aa25.73■■□□□ 1.71
RFC2-210ENST00000493156 ANKRD36CQ5JPF3 1778 aa25.72■■□□□ 1.71
RFC2-210ENST00000493156 EIF2S2P20042 333 aaKnown RBP25.71■■□□□ 1.71
RFC2-210ENST00000493156 GTF2E1P29083 439 aaPredicted RBP25.71■■□□□ 1.71
RFC2-210ENST00000493156 APLP1P51693 650 aa25.71■■□□□ 1.71
RFC2-210ENST00000493156 FSTL1Q12841 308 aa25.71■■□□□ 1.71
RFC2-210ENST00000493156 PROSER3Q2NL68 480 aa25.71■■□□□ 1.71
RFC2-210ENST00000493156 CCDC93Q567U6 631 aa25.71■■□□□ 1.71
RFC2-210ENST00000493156 GPTP24298 496 aa25.7■■□□□ 1.7
RFC2-210ENST00000493156 ERFEQ4G0M1 354 aa25.7■■□□□ 1.7
RFC2-210ENST00000493156 NUTM1Q86Y26 1132 aa25.7■■□□□ 1.7
RFC2-210ENST00000493156 SNED1Q8TER0 1413 aa25.7■■□□□ 1.7
RFC2-210ENST00000493156 NTSR2O95665 410 aa25.69■■□□□ 1.7
RFC2-210ENST00000493156 SUSD4Q5VX71 490 aa25.69■■□□□ 1.7
RFC2-210ENST00000493156 VEGFAP15692 232 aaPredicted RBP25.68■■□□□ 1.7
RFC2-210ENST00000493156 ALDH1B1P30837 517 aa25.68■■□□□ 1.7
RFC2-210ENST00000493156 ANXA1P04083 346 aa25.67■■□□□ 1.7
RFC2-210ENST00000493156 KRT24Q2M2I5 525 aa25.67■■□□□ 1.7
RFC2-210ENST00000493156 PARP10Q53GL7 1025 aa25.67■■□□□ 1.7
RFC2-210ENST00000493156 HOXB7P09629 217 aa25.66■■□□□ 1.7
RFC2-210ENST00000493156 FKBP4Q02790 459 aaKnown RBP eCLIP25.66■■□□□ 1.7
RFC2-210ENST00000493156 DPY19L2Q6NUT2 758 aa25.66■■□□□ 1.7
RFC2-210ENST00000493156 POTECB2RU33 542 aa25.65■■□□□ 1.7
RFC2-210ENST00000493156 HOXA10P31260 410 aaPredicted RBP25.65■■□□□ 1.7
RFC2-210ENST00000493156 CFAP44Q96MT7 982 aa25.65■■□□□ 1.7
RFC2-210ENST00000493156 DDX21Q9NR30 783 aaKnown RBP eCLIP25.65■■□□□ 1.7
RFC2-210ENST00000493156 PPP1R42Q7Z4L9 355 aa25.64■■□□□ 1.7
RFC2-210ENST00000493156 RTKN2Q8IZC4 609 aa25.64■■□□□ 1.7
RFC2-210ENST00000493156 SMC1BQ8NDV3 1235 aa25.64■■□□□ 1.7
RFC2-210ENST00000493156 OLFM4Q6UX06 510 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms