RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 PPP4R3CPQ6ZMV5 832 aa15.06■□□□□ 0
LRTM1-202ENST00000493075 NIP7Q9Y221 180 aaKnown RBP eCLIP15.06■□□□□ 0
LRTM1-202ENST00000493075 RRP7AQ9Y3A4 280 aaKnown RBP15.06■□□□□ 0
LRTM1-202ENST00000493075 KLRG2A4D1S0 409 aaPredicted RBP15.05■□□□□ -0
LRTM1-202ENST00000493075 SRGNP10124 158 aa15.05■□□□□ -0
LRTM1-202ENST00000493075 HLFQ16534 295 aa15.05■□□□□ -0
LRTM1-202ENST00000493075 STYK1Q6J9G0 422 aa15.05■□□□□ -0
LRTM1-202ENST00000493075 CCDC24Q8N4L8 307 aa15.05■□□□□ -0
LRTM1-202ENST00000493075 ZNF526Q8TF50 670 aaPredicted RBP15.05■□□□□ -0
LRTM1-202ENST00000493075 CNKSR1Q969H4 720 aa15.05■□□□□ -0
LRTM1-202ENST00000493075 ZNF622Q969S3 477 aaKnown RBP eCLIP15.05■□□□□ -0
LRTM1-202ENST00000493075 MAP3K15Q6ZN16 1313 aa15.05■□□□□ -0
LRTM1-202ENST00000493075 SCN7AQ01118 1682 aa15.04■□□□□ -0
LRTM1-202ENST00000493075 KIF6Q6ZMV9 814 aa15.04■□□□□ -0
LRTM1-202ENST00000493075 NGEFQ8N5V2 710 aa15.04■□□□□ -0
LRTM1-202ENST00000493075 MASTLQ96GX5 879 aa15.04■□□□□ -0
LRTM1-202ENST00000493075 BRCA1P38398 1863 aaKnown RBP15.04■□□□□ -0
LRTM1-202ENST00000493075 KIF3CO14782 793 aa15.03■□□□□ -0
LRTM1-202ENST00000493075 MYL6BP14649 208 aa15.03■□□□□ -0
LRTM1-202ENST00000493075 LMNB1P20700 586 aa15.03■□□□□ -0
LRTM1-202ENST00000493075 TTLL7Q6ZT98 887 aa15.03■□□□□ -0
LRTM1-202ENST00000493075 RNF181Q9P0P0 153 aa15.03■□□□□ -0
LRTM1-202ENST00000493075 ZC3H4Q9UPT8 1303 aaKnown RBP15.03■□□□□ -0
LRTM1-202ENST00000493075 AFDNP55196 1824 aaKnown RBP15.03■□□□□ -0
LRTM1-202ENST00000493075 EIF2S2P20042 333 aaKnown RBP15.02■□□□□ -0
LRTM1-202ENST00000493075 PDIA6Q15084 440 aa15.02■□□□□ -0
LRTM1-202ENST00000493075 LRP10Q7Z4F1 713 aa15.02■□□□□ -0
LRTM1-202ENST00000493075 NYXQ9GZU5 481 aa15.02■□□□□ -0
LRTM1-202ENST00000493075 KDM3BQ7LBC6 1761 aa15.02□□□□□ -0.01
LRTM1-202ENST00000493075 DLG5Q8TDM6 1919 aa15.02□□□□□ -0.01
LRTM1-202ENST00000493075 CFAP44Q96MT7 982 aa15.01□□□□□ -0.01
LRTM1-202ENST00000493075 ARFGEF1Q9Y6D6 1849 aa15.01□□□□□ -0.01
LRTM1-202ENST00000493075 SENP3-EIF4A1A0A087X0R7 540 aa15□□□□□ -0.01
LRTM1-202ENST00000493075 ZNF316A6NFI3 1004 aaPredicted RBP15□□□□□ -0.01
LRTM1-202ENST00000493075 NFKBIEO00221 500 aa15□□□□□ -0.01
LRTM1-202ENST00000493075 C21orf2O43822 256 aa15□□□□□ -0.01
LRTM1-202ENST00000493075 HOXB7P09629 217 aa15□□□□□ -0.01
LRTM1-202ENST00000493075 NPR1P16066 1061 aa15□□□□□ -0.01
LRTM1-202ENST00000493075 GTF2E1P29083 439 aaPredicted RBP15□□□□□ -0.01
LRTM1-202ENST00000493075 SOGA3Q5TF21 947 aa15□□□□□ -0.01
LRTM1-202ENST00000493075 GIGYF2Q6Y7W6 1299 aaKnown RBP15□□□□□ -0.01
LRTM1-202ENST00000493075 ZNF34Q8IZ26 560 aa15□□□□□ -0.01
LRTM1-202ENST00000493075 KDM2BQ8NHM5 1336 aa15□□□□□ -0.01
LRTM1-202ENST00000493075 APAF1O14727 1248 aa14.99□□□□□ -0.01
LRTM1-202ENST00000493075 PRELPP51888 382 aa14.99□□□□□ -0.01
LRTM1-202ENST00000493075 RASSF7Q02833 373 aa14.99□□□□□ -0.01
LRTM1-202ENST00000493075 CALD1Q05682 793 aaKnown RBP14.99□□□□□ -0.01
LRTM1-202ENST00000493075 PRPF40BQ6NWY9 871 aaKnown RBP14.99□□□□□ -0.01
LRTM1-202ENST00000493075 ZBTB3Q9H5J0 574 aa14.99□□□□□ -0.01
LRTM1-202ENST00000493075 LAS1LQ9Y4W2 734 aaKnown RBP14.99□□□□□ -0.01
LRTM1-202ENST00000493075 BCORQ6W2J9 1755 aa14.99□□□□□ -0.01
LRTM1-202ENST00000493075 FAM177BA6PVY3 158 aa14.98□□□□□ -0.01
LRTM1-202ENST00000493075 TOMM70O94826 608 aa14.98□□□□□ -0.01
LRTM1-202ENST00000493075 ZNF853P0CG23 659 aa14.98□□□□□ -0.01
LRTM1-202ENST00000493075 ALDH1B1P30837 517 aa14.98□□□□□ -0.01
LRTM1-202ENST00000493075 PARP10Q53GL7 1025 aa14.98□□□□□ -0.01
LRTM1-202ENST00000493075 C7orf43Q8WVR3 580 aa14.98□□□□□ -0.01
LRTM1-202ENST00000493075 DDX21Q9NR30 783 aaKnown RBP eCLIP14.98□□□□□ -0.01
LRTM1-202ENST00000493075 LTBP3Q9NS15 1303 aa14.98□□□□□ -0.01
LRTM1-202ENST00000493075 IBTKQ9P2D0 1353 aaPredicted RBP14.98□□□□□ -0.01
LRTM1-202ENST00000493075 PROSER3Q2NL68 480 aa14.97□□□□□ -0.01
LRTM1-202ENST00000493075 SUSD4Q5VX71 490 aa14.97□□□□□ -0.01
LRTM1-202ENST00000493075 COPS6Q7L5N1 327 aa14.97□□□□□ -0.01
LRTM1-202ENST00000493075 NMRK2Q9NPI5 230 aa14.97□□□□□ -0.01
LRTM1-202ENST00000493075 LAMB4A4D0S4 1761 aa14.97□□□□□ -0.01
LRTM1-202ENST00000493075 UBN2Q6ZU65 1347 aa14.96□□□□□ -0.01
LRTM1-202ENST00000493075 CRY2Q49AN0 593 aa14.96□□□□□ -0.01
LRTM1-202ENST00000493075 HSP90AB3PQ58FF7 597 aa14.96□□□□□ -0.01
LRTM1-202ENST00000493075 PPP1R42Q7Z4L9 355 aa14.96□□□□□ -0.01
LRTM1-202ENST00000493075 IFT57Q9NWB7 429 aa14.96□□□□□ -0.01
LRTM1-202ENST00000493075 DLEC1Q9Y238 1755 aa14.96□□□□□ -0.01
LRTM1-202ENST00000493075 GLTPD2A6NH11 291 aa14.95□□□□□ -0.02
LRTM1-202ENST00000493075 GPTP24298 496 aa14.95□□□□□ -0.02
LRTM1-202ENST00000493075 GNAI1P63096 354 aa14.95□□□□□ -0.02
LRTM1-202ENST00000493075 KRT24Q2M2I5 525 aa14.95□□□□□ -0.02
LRTM1-202ENST00000493075 ERFEQ4G0M1 354 aa14.95□□□□□ -0.02
LRTM1-202ENST00000493075 NUTM1Q86Y26 1132 aa14.95□□□□□ -0.02
LRTM1-202ENST00000493075 TAOK3Q9H2K8 898 aa14.95□□□□□ -0.02
LRTM1-202ENST00000493075 ZNF219Q9P2Y4 722 aaPredicted RBP14.95□□□□□ -0.02
LRTM1-202ENST00000493075 ANKRD31Q8N7Z5 1873 aa14.95□□□□□ -0.02
LRTM1-202ENST00000493075 NTSR2O95665 410 aa14.94□□□□□ -0.02
LRTM1-202ENST00000493075 ANXA1P04083 346 aa14.94□□□□□ -0.02
LRTM1-202ENST00000493075 HSPA6P17066 643 aa14.94□□□□□ -0.02
LRTM1-202ENST00000493075 HOXA10P31260 410 aaPredicted RBP14.94□□□□□ -0.02
LRTM1-202ENST00000493075 CCDC184Q52MB2 194 aa14.94□□□□□ -0.02
LRTM1-202ENST00000493075 NCBP3Q53F19 620 aaKnown RBP14.94□□□□□ -0.02
LRTM1-202ENST00000493075 CCDC93Q567U6 631 aa14.94□□□□□ -0.02
LRTM1-202ENST00000493075 SLC10A5Q5PT55 438 aa14.94□□□□□ -0.02
LRTM1-202ENST00000493075 HDGFL1Q5TGJ6 251 aa14.94□□□□□ -0.02
LRTM1-202ENST00000493075 XAGE3Q8WTP9 111 aa14.94□□□□□ -0.02
LRTM1-202ENST00000493075 NECTIN2Q92692 538 aa14.94□□□□□ -0.02
LRTM1-202ENST00000493075 RRAGCQ9HB90 399 aa14.94□□□□□ -0.02
LRTM1-202ENST00000493075 MBIPQ9NS73 344 aa14.94□□□□□ -0.02
LRTM1-202ENST00000493075 DBF4Q9UBU7 674 aaPredicted RBP14.94□□□□□ -0.02
LRTM1-202ENST00000493075 RIC1Q4ADV7 1423 aa14.94□□□□□ -0.02
LRTM1-202ENST00000493075 RNF123Q5XPI4 1314 aa14.94□□□□□ -0.02
LRTM1-202ENST00000493075 ANP32CO43423 234 aa14.93□□□□□ -0.02
LRTM1-202ENST00000493075 TCIRG1Q13488 830 aa14.93□□□□□ -0.02
LRTM1-202ENST00000493075 DUSP27Q5VZP5 1158 aa14.93□□□□□ -0.02
LRTM1-202ENST00000493075 DPY19L2Q6NUT2 758 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms