RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 ZNF219Q9P2Y4 722 aaPredicted RBP24.37■■□□□ 1.49
CHD1L-209ENST00000492728 SLX4Q8IY92 1834 aa24.37■■□□□ 1.49
CHD1L-209ENST00000492728 C21orf2O43822 256 aa24.36■■□□□ 1.49
CHD1L-209ENST00000492728 SRGNP10124 158 aa24.36■■□□□ 1.49
CHD1L-209ENST00000492728 RIPK4P57078 832 aa24.36■■□□□ 1.49
CHD1L-209ENST00000492728 NBPF5PQ86XG9 351 aaPredicted RBP24.36■■□□□ 1.49
CHD1L-209ENST00000492728 PNNQ9H307 717 aaKnown RBP24.36■■□□□ 1.49
CHD1L-209ENST00000492728 NIP7Q9Y221 180 aaKnown RBP eCLIP24.36■■□□□ 1.49
CHD1L-209ENST00000492728 ZNF652Q9Y2D9 606 aa24.36■■□□□ 1.49
CHD1L-209ENST00000492728 TNRC6CQ9HCJ0 1690 aaKnown RBP24.36■■□□□ 1.49
CHD1L-209ENST00000492728 ARFGEF2Q9Y6D5 1785 aa24.36■■□□□ 1.49
CHD1L-209ENST00000492728 CACNA1SQ13698 1873 aa24.36■■□□□ 1.49
CHD1L-209ENST00000492728 LMNB1P20700 586 aa24.35■■□□□ 1.49
CHD1L-209ENST00000492728 TTLL7Q6ZT98 887 aa24.35■■□□□ 1.49
CHD1L-209ENST00000492728 CCDC146Q8IYE0 955 aa24.35■■□□□ 1.49
CHD1L-209ENST00000492728 NGEFQ8N5V2 710 aa24.35■■□□□ 1.49
CHD1L-209ENST00000492728 PDZRN3Q9UPQ7 1066 aa24.35■■□□□ 1.49
CHD1L-209ENST00000492728 FER1L6Q2WGJ9 1857 aa24.34■■□□□ 1.49
CHD1L-209ENST00000492728 RGL2O15211 777 aa24.34■■□□□ 1.49
CHD1L-209ENST00000492728 NPHP1O15259 732 aa24.34■■□□□ 1.49
CHD1L-209ENST00000492728 TOMM70O94826 608 aa24.34■■□□□ 1.49
CHD1L-209ENST00000492728 TMPOP42166 694 aaKnown RBP24.34■■□□□ 1.49
CHD1L-209ENST00000492728 RRP7AQ9Y3A4 280 aaKnown RBP24.34■■□□□ 1.49
CHD1L-209ENST00000492728 FAM177BA6PVY3 158 aa24.33■■□□□ 1.49
CHD1L-209ENST00000492728 STYK1Q6J9G0 422 aa24.33■■□□□ 1.49
CHD1L-209ENST00000492728 PRPF40BQ6NWY9 871 aaKnown RBP24.33■■□□□ 1.49
CHD1L-209ENST00000492728 TSPYL4Q9UJ04 414 aa24.33■■□□□ 1.49
CHD1L-209ENST00000492728 CCDC88AQ3V6T2 1871 aa24.32■■□□□ 1.48
CHD1L-209ENST00000492728 ABCC12Q96J65 1359 aa24.32■■□□□ 1.48
CHD1L-209ENST00000492728 KDM2BQ8NHM5 1336 aa24.32■■□□□ 1.48
CHD1L-209ENST00000492728 ZC3H4Q9UPT8 1303 aaKnown RBP24.32■■□□□ 1.48
CHD1L-209ENST00000492728 MYL6BP14649 208 aa24.31■■□□□ 1.48
CHD1L-209ENST00000492728 LRP10Q7Z4F1 713 aa24.31■■□□□ 1.48
CHD1L-209ENST00000492728 MASTLQ96GX5 879 aa24.31■■□□□ 1.48
CHD1L-209ENST00000492728 RRAGCQ9HB90 399 aa24.31■■□□□ 1.48
CHD1L-209ENST00000492728 MAP3K15Q6ZN16 1313 aa24.31■■□□□ 1.48
CHD1L-209ENST00000492728 KLRG2A4D1S0 409 aaPredicted RBP24.3■■□□□ 1.48
CHD1L-209ENST00000492728 NUP98P52948 1817 aa24.3■■□□□ 1.48
CHD1L-209ENST00000492728 CNKSR1Q969H4 720 aa24.29■■□□□ 1.48
CHD1L-209ENST00000492728 UBN2Q6ZU65 1347 aa24.29■■□□□ 1.48
CHD1L-209ENST00000492728 PDIA6Q15084 440 aa24.28■■□□□ 1.48
CHD1L-209ENST00000492728 PROSER3Q2NL68 480 aa24.28■■□□□ 1.48
CHD1L-209ENST00000492728 RBM46Q8TBY0 533 aaKnown RBP24.28■■□□□ 1.48
CHD1L-209ENST00000492728 C7orf43Q8WVR3 580 aa24.28■■□□□ 1.48
CHD1L-209ENST00000492728 ZBTB3Q9H5J0 574 aa24.28■■□□□ 1.48
CHD1L-209ENST00000492728 ERVV-1B6SEH8 477 aa24.27■■□□□ 1.48
CHD1L-209ENST00000492728 NEUROD2Q15784 382 aa24.27■■□□□ 1.48
CHD1L-209ENST00000492728 TPTE2Q6XPS3 522 aa24.27■■□□□ 1.48
CHD1L-209ENST00000492728 PRKRIP1Q9H875 184 aaPredicted RBP24.27■■□□□ 1.48
CHD1L-209ENST00000492728 TRIM35Q9UPQ4 493 aa24.27■■□□□ 1.48
CHD1L-209ENST00000492728 GLTPD2A6NH11 291 aa24.26■■□□□ 1.47
CHD1L-209ENST00000492728 ANXA1P04083 346 aa24.26■■□□□ 1.47
CHD1L-209ENST00000492728 OLFM4Q6UX06 510 aa24.26■■□□□ 1.47
CHD1L-209ENST00000492728 NUTM1Q86Y26 1132 aa24.26■■□□□ 1.47
CHD1L-209ENST00000492728 ADAMTS8Q9UP79 889 aa24.26■■□□□ 1.47
CHD1L-209ENST00000492728 ERBB4Q15303 1308 aa24.26■■□□□ 1.47
CHD1L-209ENST00000492728 LTBP3Q9NS15 1303 aa24.26■■□□□ 1.47
CHD1L-209ENST00000492728 NPR1P16066 1061 aa24.25■■□□□ 1.47
CHD1L-209ENST00000492728 GPTP24298 496 aa24.25■■□□□ 1.47
CHD1L-209ENST00000492728 LMOD3Q0VAK6 560 aa24.25■■□□□ 1.47
CHD1L-209ENST00000492728 KRT24Q2M2I5 525 aa24.25■■□□□ 1.47
CHD1L-209ENST00000492728 KIF6Q6ZMV9 814 aa24.25■■□□□ 1.47
CHD1L-209ENST00000492728 TAOK3Q9H2K8 898 aa24.25■■□□□ 1.47
CHD1L-209ENST00000492728 DICER1Q9UPY3 1922 aaKnown RBP24.25■■□□□ 1.47
CHD1L-209ENST00000492728 EIF2S2P20042 333 aaKnown RBP24.24■■□□□ 1.47
CHD1L-209ENST00000492728 RUNDC1Q96C34 613 aa24.24■■□□□ 1.47
CHD1L-209ENST00000492728 WDR43Q15061 677 aaKnown RBP eCLIP24.23■■□□□ 1.47
CHD1L-209ENST00000492728 ERFEQ4G0M1 354 aa24.23■■□□□ 1.47
CHD1L-209ENST00000492728 BABAM1Q9NWV8 329 aa24.23■■□□□ 1.47
CHD1L-209ENST00000492728 WDR90Q96KV7 1748 aa24.22■■□□□ 1.47
CHD1L-209ENST00000492728 SNED1Q8TER0 1413 aa24.22■■□□□ 1.47
CHD1L-209ENST00000492728 IBTKQ9P2D0 1353 aaPredicted RBP24.22■■□□□ 1.47
CHD1L-209ENST00000492728 POTECB2RU33 542 aa24.22■■□□□ 1.47
CHD1L-209ENST00000492728 SUSD4Q5VX71 490 aa24.22■■□□□ 1.47
CHD1L-209ENST00000492728 SLC51AQ86UW1 340 aa24.22■■□□□ 1.47
CHD1L-209ENST00000492728 C16orf71Q8IYS4 520 aaPredicted RBP24.22■■□□□ 1.47
CHD1L-209ENST00000492728 ZNF34Q8IZ26 560 aa24.22■■□□□ 1.47
CHD1L-209ENST00000492728 CHL1O00533 1208 aa24.21■■□□□ 1.47
CHD1L-209ENST00000492728 CRY2Q49AN0 593 aa24.21■■□□□ 1.47
CHD1L-209ENST00000492728 NECTIN2Q92692 538 aa24.21■■□□□ 1.47
CHD1L-209ENST00000492728 RIC1Q4ADV7 1423 aa24.2■■□□□ 1.46
CHD1L-209ENST00000492728 NTSR2O95665 410 aa24.2■■□□□ 1.46
CHD1L-209ENST00000492728 APLP1P51693 650 aa24.2■■□□□ 1.46
CHD1L-209ENST00000492728 HTRA3P83110 453 aa24.2■■□□□ 1.46
CHD1L-209ENST00000492728 GIGYF2Q6Y7W6 1299 aaKnown RBP24.2■■□□□ 1.46
CHD1L-209ENST00000492728 CCDC93Q567U6 631 aa24.19■■□□□ 1.46
CHD1L-209ENST00000492728 SOGA3Q5TF21 947 aa24.19■■□□□ 1.46
CHD1L-209ENST00000492728 C3orf67Q6ZVT6 689 aa24.19■■□□□ 1.46
CHD1L-209ENST00000492728 NYXQ9GZU5 481 aa24.19■■□□□ 1.46
CHD1L-209ENST00000492728 GTF2E1P29083 439 aaPredicted RBP24.18■■□□□ 1.46
CHD1L-209ENST00000492728 FSTL1Q12841 308 aa24.18■■□□□ 1.46
CHD1L-209ENST00000492728 VEGFAP15692 232 aaPredicted RBP24.17■■□□□ 1.46
CHD1L-209ENST00000492728 DNAJC5GQ8N7S2 189 aa24.17■■□□□ 1.46
CHD1L-209ENST00000492728 LAS1LQ9Y4W2 734 aaKnown RBP24.17■■□□□ 1.46
CHD1L-209ENST00000492728 FKBP4Q02790 459 aaKnown RBP eCLIP24.16■■□□□ 1.46
CHD1L-209ENST00000492728 ZNF277Q9NRM2 450 aaPredicted RBP24.16■■□□□ 1.46
CHD1L-209ENST00000492728 XAGE3Q8WTP9 111 aa24.15■■□□□ 1.46
CHD1L-209ENST00000492728 ANKRD36CQ5JPF3 1778 aa24.14■■□□□ 1.46
CHD1L-209ENST00000492728 DDNO94850 711 aaPredicted RBP24.14■■□□□ 1.45
CHD1L-209ENST00000492728 COPS6Q7L5N1 327 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms