RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 SKILP12757 684 aa11.43□□□□□ -0.58
VPS8-225ENST00000492449 U2AF1Q01081 240 aaKnown RBP eCLIP11.43□□□□□ -0.58
VPS8-225ENST00000492449 TRDNQ13061 729 aa11.43□□□□□ -0.58
VPS8-225ENST00000492449 FOXD4L6Q3SYB3 417 aaPredicted RBP11.43□□□□□ -0.58
VPS8-225ENST00000492449 FOXD4L3Q6VB84 417 aaPredicted RBP11.43□□□□□ -0.58
VPS8-225ENST00000492449 C16orf71Q8IYS4 520 aaPredicted RBP11.43□□□□□ -0.58
VPS8-225ENST00000492449 SRRTQ9BXP5 876 aaKnown RBP11.43□□□□□ -0.58
VPS8-225ENST00000492449 ZSCAN16Q9H4T2 348 aaPredicted RBP11.43□□□□□ -0.58
VPS8-225ENST00000492449 CCDC196A0A1B0GTZ2 297 aa11.42□□□□□ -0.58
VPS8-225ENST00000492449 CASTP20810 708 aaKnown RBP11.42□□□□□ -0.58
VPS8-225ENST00000492449 HSP90AB3PQ58FF7 597 aa11.42□□□□□ -0.58
VPS8-225ENST00000492449 JPH4Q96JJ6 628 aa11.42□□□□□ -0.58
VPS8-225ENST00000492449 NUP62CLQ9H1M0 184 aa11.42□□□□□ -0.58
VPS8-225ENST00000492449 RAI14Q9P0K7 980 aa11.42□□□□□ -0.58
VPS8-225ENST00000492449 ADAM21Q9UKJ8 722 aa11.42□□□□□ -0.58
VPS8-225ENST00000492449 SUFUQ9UMX1 484 aa11.42□□□□□ -0.58
VPS8-225ENST00000492449 SETBP1Q9Y6X0 1596 aa11.42□□□□□ -0.58
VPS8-225ENST00000492449 EIF3CLB5ME19 914 aaKnown RBP11.42□□□□□ -0.58
VPS8-225ENST00000492449 ANO6Q4KMQ2 910 aa11.42□□□□□ -0.58
VPS8-225ENST00000492449 MSL3Q8N5Y2 521 aaKnown RBP11.42□□□□□ -0.58
VPS8-225ENST00000492449 ANKRD44Q8N8A2 993 aa11.42□□□□□ -0.58
VPS8-225ENST00000492449 EIF3CQ99613 913 aaKnown RBP11.42□□□□□ -0.58
VPS8-225ENST00000492449 ESYT1Q9BSJ8 1104 aa11.42□□□□□ -0.58
VPS8-225ENST00000492449 QRICH2Q9H0J4 1663 aa11.41□□□□□ -0.58
VPS8-225ENST00000492449 FIBPO43427 364 aa11.41□□□□□ -0.58
VPS8-225ENST00000492449 SASH3O75995 380 aa11.41□□□□□ -0.58
VPS8-225ENST00000492449 SYT1P21579 422 aa11.41□□□□□ -0.58
VPS8-225ENST00000492449 CNKSR2Q8WXI2 1034 aa11.41□□□□□ -0.58
VPS8-225ENST00000492449 PALD1Q9ULE6 856 aa11.41□□□□□ -0.58
VPS8-225ENST00000492449 CARMIL2Q6F5E8 1435 aa11.41□□□□□ -0.58
VPS8-225ENST00000492449 CCDC189A1A4V9 331 aa11.41□□□□□ -0.58
VPS8-225ENST00000492449 PSDA5PKW4 1024 aaPredicted RBP11.41□□□□□ -0.58
VPS8-225ENST00000492449 ATP6V1AP38606 617 aa11.41□□□□□ -0.58
VPS8-225ENST00000492449 SNW1Q13573 536 aaKnown RBP11.41□□□□□ -0.58
VPS8-225ENST00000492449 MKRN1Q9UHC7 482 aaKnown RBP11.41□□□□□ -0.58
VPS8-225ENST00000492449 CHD2O14647 1828 aaKnown RBP11.41□□□□□ -0.58
VPS8-225ENST00000492449 MSH6P52701 1360 aa11.41□□□□□ -0.58
VPS8-225ENST00000492449 EFCAB8A8MWE9 144 aa11.4□□□□□ -0.58
VPS8-225ENST00000492449 LEKR1Q6ZMV7 388 aa11.4□□□□□ -0.58
VPS8-225ENST00000492449 LRRN4CLQ8ND94 238 aa11.4□□□□□ -0.58
VPS8-225ENST00000492449 TACO1Q9BSH4 297 aaKnown RBP11.4□□□□□ -0.58
VPS8-225ENST00000492449 HECW2Q9P2P5 1572 aa11.4□□□□□ -0.58
VPS8-225ENST00000492449 SETD1AO15047 1707 aaKnown RBP11.4□□□□□ -0.58
VPS8-225ENST00000492449 PHLPP2Q6ZVD8 1323 aa11.4□□□□□ -0.58
VPS8-225ENST00000492449 ASXL2Q76L83 1435 aa11.4□□□□□ -0.58
VPS8-225ENST00000492449 TADA3O75528 432 aa11.4□□□□□ -0.58
VPS8-225ENST00000492449 SART3Q15020 963 aaKnown RBP11.4□□□□□ -0.58
VPS8-225ENST00000492449 CC2D1AQ6P1N0 951 aaPredicted RBP11.4□□□□□ -0.58
VPS8-225ENST00000492449 RPAP2Q8IXW5 612 aaPredicted RBP11.4□□□□□ -0.58
VPS8-225ENST00000492449 OTUD7AQ8TE49 926 aaPredicted RBP11.4□□□□□ -0.58
VPS8-225ENST00000492449 GSDMDP57764 484 aa11.4□□□□□ -0.59
VPS8-225ENST00000492449 EFCAB13Q8IY85 973 aa11.4□□□□□ -0.59
VPS8-225ENST00000492449 UBXN4Q92575 508 aa11.4□□□□□ -0.59
VPS8-225ENST00000492449 CCDC69A6NI79 296 aa11.39□□□□□ -0.59
VPS8-225ENST00000492449 ZCCHC17Q9NP64 241 aaKnown RBP11.39□□□□□ -0.59
VPS8-225ENST00000492449 DDX19AQ9NUU7 478 aaKnown RBP11.39□□□□□ -0.59
VPS8-225ENST00000492449 EFCAB6Q5THR3 1501 aa11.39□□□□□ -0.59
VPS8-225ENST00000492449 ADGRL3Q9HAR2 1447 aa11.39□□□□□ -0.59
VPS8-225ENST00000492449 VAMP4O75379 141 aa11.39□□□□□ -0.59
VPS8-225ENST00000492449 API5Q9BZZ5 524 aaKnown RBP11.39□□□□□ -0.59
VPS8-225ENST00000492449 MAP2K2P36507 400 aa11.38□□□□□ -0.59
VPS8-225ENST00000492449 LMAN1P49257 510 aa11.38□□□□□ -0.59
VPS8-225ENST00000492449 HNRNPMP52272 730 aaKnown RBP eCLIP11.38□□□□□ -0.59
VPS8-225ENST00000492449 DHX8Q14562 1220 aaKnown RBP11.38□□□□□ -0.59
VPS8-225ENST00000492449 CLSTN2Q9H4D0 955 aa11.38□□□□□ -0.59
VPS8-225ENST00000492449 PLCH2O75038 1416 aa11.38□□□□□ -0.59
VPS8-225ENST00000492449 ADGRB1O14514 1584 aa11.38□□□□□ -0.59
VPS8-225ENST00000492449 DNM1Q05193 864 aaKnown RBP11.38□□□□□ -0.59
VPS8-225ENST00000492449 ANKRD20A12PQ8NF67 263 aa11.38□□□□□ -0.59
VPS8-225ENST00000492449 PPP1R13BQ96KQ4 1090 aa11.38□□□□□ -0.59
VPS8-225ENST00000492449 OSBPL5Q9H0X9 879 aaPredicted RBP11.38□□□□□ -0.59
VPS8-225ENST00000492449 TTC41PQ6P2S7 1318 aa11.38□□□□□ -0.59
VPS8-225ENST00000492449 TTC21AQ8NDW8 1320 aa11.38□□□□□ -0.59
VPS8-225ENST00000492449 NRXN1Q9ULB1 1477 aa11.38□□□□□ -0.59
VPS8-225ENST00000492449 NPHP1O15259 732 aa11.37□□□□□ -0.59
VPS8-225ENST00000492449 TDO2P48775 406 aa11.37□□□□□ -0.59
VPS8-225ENST00000492449 ZNF165P49910 485 aa11.37□□□□□ -0.59
VPS8-225ENST00000492449 IQCB1Q15051 598 aa11.37□□□□□ -0.59
VPS8-225ENST00000492449 TTC14Q96N46 770 aa11.37□□□□□ -0.59
VPS8-225ENST00000492449 FUT8Q9BYC5 575 aa11.37□□□□□ -0.59
VPS8-225ENST00000492449 TNMDQ9H2S6 317 aa11.37□□□□□ -0.59
VPS8-225ENST00000492449 IMPACTQ9P2X3 320 aa11.37□□□□□ -0.59
VPS8-225ENST00000492449 MTMR6Q9Y217 621 aa11.37□□□□□ -0.59
VPS8-225ENST00000492449 VWDEQ8N2E2 1590 aa11.37□□□□□ -0.59
VPS8-225ENST00000492449 PATL2C9JE40 543 aaKnown RBP11.37□□□□□ -0.59
VPS8-225ENST00000492449 E4F1Q66K89 784 aaPredicted RBP11.37□□□□□ -0.59
VPS8-225ENST00000492449 GPR161Q8N6U8 529 aaKnown RBP11.37□□□□□ -0.59
VPS8-225ENST00000492449 MAP2K7O14733 419 aa11.37□□□□□ -0.59
VPS8-225ENST00000492449 ARID5BQ14865 1188 aa11.37□□□□□ -0.59
VPS8-225ENST00000492449 CDK12Q9NYV4 1490 aaPredicted RBP11.37□□□□□ -0.59
VPS8-225ENST00000492449 PREX1Q8TCU6 1659 aa11.36□□□□□ -0.59
VPS8-225ENST00000492449 KIAA0232Q92628 1395 aa11.36□□□□□ -0.59
VPS8-225ENST00000492449 SALL3Q9BXA9 1300 aa11.36□□□□□ -0.59
VPS8-225ENST00000492449 SEC31AO94979 1220 aaKnown RBP11.36□□□□□ -0.59
VPS8-225ENST00000492449 ZNF853P0CG23 659 aa11.36□□□□□ -0.59
VPS8-225ENST00000492449 ZRSR1Q15695 479 aaKnown RBP11.36□□□□□ -0.59
VPS8-225ENST00000492449 TRMT1Q9NXH9 659 aaKnown RBP11.36□□□□□ -0.59
VPS8-225ENST00000492449 PPP1R12AO14974 1030 aaPredicted RBP11.36□□□□□ -0.59
VPS8-225ENST00000492449 SGSM2O43147 1006 aa11.36□□□□□ -0.59
VPS8-225ENST00000492449 LIG1P18858 919 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 339.8 ms