RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 CCDC87Q9NVE4 849 aa13.63□□□□□ -0.23
ATF3-209ENST00000492118 BRPF1P55201 1214 aaPredicted RBP13.62□□□□□ -0.23
ATF3-209ENST00000492118 DEFB132Q7Z7B7 95 aa13.62□□□□□ -0.23
ATF3-209ENST00000492118 PROM2Q8N271 834 aa13.62□□□□□ -0.23
ATF3-209ENST00000492118 TJP1Q07157 1748 aa13.62□□□□□ -0.23
ATF3-209ENST00000492118 MYH14Q7Z406 1995 aaKnown RBP13.62□□□□□ -0.23
ATF3-209ENST00000492118 LAMB4A4D0S4 1761 aa13.61□□□□□ -0.23
ATF3-209ENST00000492118 PTPRCP08575 1304 aa13.61□□□□□ -0.23
ATF3-209ENST00000492118 GNPATO15228 680 aa13.61□□□□□ -0.23
ATF3-209ENST00000492118 PDE3AQ14432 1141 aa13.61□□□□□ -0.23
ATF3-209ENST00000492118 TXNRD1Q16881 649 aa13.61□□□□□ -0.23
ATF3-209ENST00000492118 LRP10Q7Z4F1 713 aa13.61□□□□□ -0.23
ATF3-209ENST00000492118 AMIGO3Q86WK7 504 aa13.61□□□□□ -0.23
ATF3-209ENST00000492118 C1orf115Q9H7X2 142 aa13.61□□□□□ -0.23
ATF3-209ENST00000492118 SRCAPQ6ZRS2 3230 aa13.61□□□□□ -0.23
ATF3-209ENST00000492118 ATP5J2-PTCD1G3V325 749 aa13.61□□□□□ -0.23
ATF3-209ENST00000492118 CWF19L2Q2TBE0 894 aaKnown RBP13.61□□□□□ -0.23
ATF3-209ENST00000492118 ANKRD13DQ6ZTN6 518 aa13.61□□□□□ -0.23
ATF3-209ENST00000492118 JARID2Q92833 1246 aaPredicted RBP13.61□□□□□ -0.23
ATF3-209ENST00000492118 ADCY9O60503 1353 aa13.6□□□□□ -0.23
ATF3-209ENST00000492118 MVPQ14764 893 aaKnown RBP13.6□□□□□ -0.23
ATF3-209ENST00000492118 RTL5Q5HYW3 569 aaPredicted RBP13.6□□□□□ -0.23
ATF3-209ENST00000492118 B4GALNT3Q6L9W6 998 aa13.6□□□□□ -0.23
ATF3-209ENST00000492118 DNAAF4Q8WXU2 420 aa13.6□□□□□ -0.23
ATF3-209ENST00000492118 ARHGAP45Q92619 1136 aa13.6□□□□□ -0.23
ATF3-209ENST00000492118 CACNA1FO60840 1977 aa13.6□□□□□ -0.23
ATF3-209ENST00000492118 GOLGB1Q14789 3259 aaKnown RBP13.6□□□□□ -0.23
ATF3-209ENST00000492118 EZH2Q15910 746 aaKnown RBP13.6□□□□□ -0.23
ATF3-209ENST00000492118 MYD88Q99836 296 aa13.6□□□□□ -0.23
ATF3-209ENST00000492118 ABCC4O15439 1325 aa13.59□□□□□ -0.23
ATF3-209ENST00000492118 DDX58O95786 925 aaKnown RBP13.59□□□□□ -0.23
ATF3-209ENST00000492118 SF3B2Q13435 895 aaKnown RBP13.59□□□□□ -0.23
ATF3-209ENST00000492118 AAMPQ13685 434 aa13.59□□□□□ -0.23
ATF3-209ENST00000492118 KSR2Q6VAB6 950 aa13.59□□□□□ -0.23
ATF3-209ENST00000492118 DZIP3Q86Y13 1208 aaKnown RBP13.58□□□□□ -0.23
ATF3-209ENST00000492118 AK7Q96M32 723 aa13.58□□□□□ -0.23
ATF3-209ENST00000492118 FAM177BA6PVY3 158 aa13.58□□□□□ -0.24
ATF3-209ENST00000492118 HLFQ16534 295 aa13.58□□□□□ -0.24
ATF3-209ENST00000492118 KIF6Q6ZMV9 814 aa13.58□□□□□ -0.24
ATF3-209ENST00000492118 MS4A1P11836 297 aa13.57□□□□□ -0.24
ATF3-209ENST00000492118 GPTP24298 496 aa13.57□□□□□ -0.24
ATF3-209ENST00000492118 ERICH6BQ5W0A0 696 aa13.57□□□□□ -0.24
ATF3-209ENST00000492118 MEIS3Q99687 375 aa13.57□□□□□ -0.24
ATF3-209ENST00000492118 MSH5O43196 834 aa13.57□□□□□ -0.24
ATF3-209ENST00000492118 LY75O60449 1722 aa13.57□□□□□ -0.24
ATF3-209ENST00000492118 IL6STP40189 918 aaPredicted RBP13.56□□□□□ -0.24
ATF3-209ENST00000492118 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
ATF3-209ENST00000492118 SRCIN1Q9C0H9 1055 aa13.56□□□□□ -0.24
ATF3-209ENST00000492118 SRP68Q9UHB9 627 aaKnown RBP13.56□□□□□ -0.24
ATF3-209ENST00000492118 ERBB4Q15303 1308 aa13.56□□□□□ -0.24
ATF3-209ENST00000492118 EIF5P55010 431 aaKnown RBP13.55□□□□□ -0.24
ATF3-209ENST00000492118 BEND3Q5T5X7 828 aa13.55□□□□□ -0.24
ATF3-209ENST00000492118 PLBD2Q8NHP8 589 aa13.55□□□□□ -0.24
ATF3-209ENST00000492118 TFCP2L1Q9NZI6 479 aa13.55□□□□□ -0.24
ATF3-209ENST00000492118 DDX19BQ9UMR2 479 aa13.55□□□□□ -0.24
ATF3-209ENST00000492118 RTCBQ9Y3I0 505 aaKnown RBP13.55□□□□□ -0.24
ATF3-209ENST00000492118 NEXNQ0ZGT2 675 aa13.55□□□□□ -0.24
ATF3-209ENST00000492118 INTS3Q68E01 1043 aaKnown RBP13.55□□□□□ -0.24
ATF3-209ENST00000492118 CCDC136Q96JN2 1154 aa13.55□□□□□ -0.24
ATF3-209ENST00000492118 COL15A1P39059 1388 aa13.55□□□□□ -0.24
ATF3-209ENST00000492118 COL5A3P25940 1745 aaPredicted RBP13.54□□□□□ -0.24
ATF3-209ENST00000492118 TAF1LQ8IZX4 1826 aa13.54□□□□□ -0.24
ATF3-209ENST00000492118 PLSCR1O15162 318 aa13.54□□□□□ -0.24
ATF3-209ENST00000492118 IGKV5-2P06315 115 aa13.54□□□□□ -0.24
ATF3-209ENST00000492118 CCT4P50991 539 aaKnown RBP13.54□□□□□ -0.24
ATF3-209ENST00000492118 ZNF827Q17R98 1081 aa13.54□□□□□ -0.24
ATF3-209ENST00000492118 SLC27A3Q5K4L6 730 aa13.54□□□□□ -0.24
ATF3-209ENST00000492118 METTL22Q9BUU2 404 aaPredicted RBP13.54□□□□□ -0.24
ATF3-209ENST00000492118 TNS1Q9HBL0 1735 aaKnown RBP13.54□□□□□ -0.24
ATF3-209ENST00000492118 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.54□□□□□ -0.24
ATF3-209ENST00000492118 ZBTB7BO15156 539 aaPredicted RBP13.54□□□□□ -0.24
ATF3-209ENST00000492118 NBPF7P0C2Y1 421 aaPredicted RBP13.54□□□□□ -0.24
ATF3-209ENST00000492118 C9orf78Q9NZ63 289 aaPredicted RBP13.54□□□□□ -0.24
ATF3-209ENST00000492118 ARHGEF1Q92888 912 aaKnown RBP13.53□□□□□ -0.24
ATF3-209ENST00000492118 PCDHB15Q9Y5E8 787 aa13.53□□□□□ -0.24
ATF3-209ENST00000492118 MAP3K15Q6ZN16 1313 aa13.53□□□□□ -0.24
ATF3-209ENST00000492118 CNTNAP4Q9C0A0 1308 aa13.53□□□□□ -0.24
ATF3-209ENST00000492118 C4BP0C0L5 1744 aa13.53□□□□□ -0.24
ATF3-209ENST00000492118 RPS6KA4O75676 772 aa13.52□□□□□ -0.24
ATF3-209ENST00000492118 RFC4P35249 363 aa13.52□□□□□ -0.24
ATF3-209ENST00000492118 BAG6P46379 1132 aa13.52□□□□□ -0.24
ATF3-209ENST00000492118 USPL1Q5W0Q7 1092 aa13.52□□□□□ -0.24
ATF3-209ENST00000492118 CAMKK2Q96RR4 588 aa13.52□□□□□ -0.24
ATF3-209ENST00000492118 USP44Q9H0E7 712 aa13.52□□□□□ -0.24
ATF3-209ENST00000492118 ARFGEF2Q9Y6D5 1785 aa13.52□□□□□ -0.25
ATF3-209ENST00000492118 NEURL1BA8MQ27 555 aa13.52□□□□□ -0.25
ATF3-209ENST00000492118 TRAPPC3LQ5T215 181 aa13.52□□□□□ -0.25
ATF3-209ENST00000492118 SYNE4Q8N205 404 aa13.52□□□□□ -0.25
ATF3-209ENST00000492118 ZBTB40Q9NUA8 1239 aa13.52□□□□□ -0.25
ATF3-209ENST00000492118 PPP4R2Q9NY27 417 aa13.52□□□□□ -0.25
ATF3-209ENST00000492118 ZPR1O75312 459 aa13.51□□□□□ -0.25
ATF3-209ENST00000492118 ILDR2Q71H61 639 aa13.51□□□□□ -0.25
ATF3-209ENST00000492118 UBE3BQ7Z3V4 1068 aa13.51□□□□□ -0.25
ATF3-209ENST00000492118 LINS1Q8NG48 757 aa13.51□□□□□ -0.25
ATF3-209ENST00000492118 A0A087WZG4 1122 aa13.51□□□□□ -0.25
ATF3-209ENST00000492118 CAMTA2O94983 1202 aa13.51□□□□□ -0.25
ATF3-209ENST00000492118 RC3H1Q5TC82 1133 aaKnown RBP13.51□□□□□ -0.25
ATF3-209ENST00000492118 LRRFIP2Q9Y608 721 aaKnown RBP13.51□□□□□ -0.25
ATF3-209ENST00000492118 UBTFL1P0CB47 393 aaPredicted RBP13.5□□□□□ -0.25
ATF3-209ENST00000492118 GIGYF2Q6Y7W6 1299 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms