RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 C21orf2O43822 256 aa24.27■■□□□ 1.48
SMIM4-205ENST00000491607 SBF1O95248 1867 aa24.26■■□□□ 1.47
SMIM4-205ENST00000491607 PRELPP51888 382 aa24.26■■□□□ 1.47
SMIM4-205ENST00000491607 NGEFQ8N5V2 710 aa24.26■■□□□ 1.47
SMIM4-205ENST00000491607 RRAGCQ9HB90 399 aa24.26■■□□□ 1.47
SMIM4-205ENST00000491607 NIP7Q9Y221 180 aaKnown RBP eCLIP24.26■■□□□ 1.47
SMIM4-205ENST00000491607 LAMB4A4D0S4 1761 aa24.26■■□□□ 1.47
SMIM4-205ENST00000491607 KDM3BQ7LBC6 1761 aa24.26■■□□□ 1.47
SMIM4-205ENST00000491607 NFKBIEO00221 500 aa24.25■■□□□ 1.47
SMIM4-205ENST00000491607 CEP350Q5VT06 3117 aa24.24■■□□□ 1.47
SMIM4-205ENST00000491607 FAM177BA6PVY3 158 aa24.24■■□□□ 1.47
SMIM4-205ENST00000491607 EIF4A1P60842 406 aaKnown RBP24.24■■□□□ 1.47
SMIM4-205ENST00000491607 CNKSR1Q969H4 720 aa24.24■■□□□ 1.47
SMIM4-205ENST00000491607 ZC3H4Q9UPT8 1303 aaKnown RBP24.24■■□□□ 1.47
SMIM4-205ENST00000491607 SRGNP10124 158 aa24.23■■□□□ 1.47
SMIM4-205ENST00000491607 STYK1Q6J9G0 422 aa24.23■■□□□ 1.47
SMIM4-205ENST00000491607 RIPK4P57078 832 aa24.22■■□□□ 1.47
SMIM4-205ENST00000491607 HLFQ16534 295 aa24.22■■□□□ 1.47
SMIM4-205ENST00000491607 TPTE2Q6XPS3 522 aa24.22■■□□□ 1.47
SMIM4-205ENST00000491607 RBM46Q8TBY0 533 aaKnown RBP24.22■■□□□ 1.47
SMIM4-205ENST00000491607 MASTLQ96GX5 879 aa24.22■■□□□ 1.47
SMIM4-205ENST00000491607 RRP7AQ9Y3A4 280 aaKnown RBP24.22■■□□□ 1.47
SMIM4-205ENST00000491607 MYBBP1AQ9BQG0 1328 aaKnown RBP24.21■■□□□ 1.47
SMIM4-205ENST00000491607 RGL2O15211 777 aa24.21■■□□□ 1.47
SMIM4-205ENST00000491607 MYL6BP14649 208 aa24.21■■□□□ 1.47
SMIM4-205ENST00000491607 PRPF40BQ6NWY9 871 aaKnown RBP24.21■■□□□ 1.47
SMIM4-205ENST00000491607 TSPYL4Q9UJ04 414 aa24.21■■□□□ 1.47
SMIM4-205ENST00000491607 TNRC6CQ9HCJ0 1690 aaKnown RBP24.21■■□□□ 1.47
SMIM4-205ENST00000491607 APLP1P51693 650 aa24.2■■□□□ 1.46
SMIM4-205ENST00000491607 TIAM2Q8IVF5 1701 aa24.19■■□□□ 1.46
SMIM4-205ENST00000491607 GTF2E1P29083 439 aaPredicted RBP24.19■■□□□ 1.46
SMIM4-205ENST00000491607 KIF6Q6ZMV9 814 aa24.19■■□□□ 1.46
SMIM4-205ENST00000491607 GLTPD2A6NH11 291 aa24.18■■□□□ 1.46
SMIM4-205ENST00000491607 TAOK3Q9H2K8 898 aa24.18■■□□□ 1.46
SMIM4-205ENST00000491607 NPR1P16066 1061 aa24.17■■□□□ 1.46
SMIM4-205ENST00000491607 ERFEQ4G0M1 354 aa24.17■■□□□ 1.46
SMIM4-205ENST00000491607 SOGA3Q5TF21 947 aa24.17■■□□□ 1.46
SMIM4-205ENST00000491607 MAP3K15Q6ZN16 1313 aa24.16■■□□□ 1.46
SMIM4-205ENST00000491607 CACNA1SQ13698 1873 aa24.16■■□□□ 1.46
SMIM4-205ENST00000491607 ERVV-1B6SEH8 477 aa24.16■■□□□ 1.46
SMIM4-205ENST00000491607 TMPOP42166 694 aaKnown RBP24.16■■□□□ 1.46
SMIM4-205ENST00000491607 LMOD3Q0VAK6 560 aa24.16■■□□□ 1.46
SMIM4-205ENST00000491607 TTLL7Q6ZT98 887 aa24.16■■□□□ 1.46
SMIM4-205ENST00000491607 CCDC146Q8IYE0 955 aa24.16■■□□□ 1.46
SMIM4-205ENST00000491607 FSTL1Q12841 308 aa24.15■■□□□ 1.46
SMIM4-205ENST00000491607 ZBTB3Q9H5J0 574 aa24.15■■□□□ 1.46
SMIM4-205ENST00000491607 SLX4Q8IY92 1834 aa24.14■■□□□ 1.46
SMIM4-205ENST00000491607 LTBP3Q9NS15 1303 aa24.14■■□□□ 1.46
SMIM4-205ENST00000491607 WDR43Q15061 677 aaKnown RBP eCLIP24.14■■□□□ 1.45
SMIM4-205ENST00000491607 NEUROD2Q15784 382 aa24.14■■□□□ 1.45
SMIM4-205ENST00000491607 DPY19L2Q6NUT2 758 aa24.14■■□□□ 1.45
SMIM4-205ENST00000491607 FER1L6Q2WGJ9 1857 aa24.13■■□□□ 1.45
SMIM4-205ENST00000491607 CCDC88AQ3V6T2 1871 aa24.13■■□□□ 1.45
SMIM4-205ENST00000491607 KLRG2A4D1S0 409 aaPredicted RBP24.13■■□□□ 1.45
SMIM4-205ENST00000491607 VEGFAP15692 232 aaPredicted RBP24.13■■□□□ 1.45
SMIM4-205ENST00000491607 EIF2S2P20042 333 aaKnown RBP24.13■■□□□ 1.45
SMIM4-205ENST00000491607 GPTP24298 496 aa24.13■■□□□ 1.45
SMIM4-205ENST00000491607 NYXQ9GZU5 481 aa24.13■■□□□ 1.45
SMIM4-205ENST00000491607 ARFGEF2Q9Y6D5 1785 aa24.13■■□□□ 1.45
SMIM4-205ENST00000491607 NUTM1Q86Y26 1132 aa24.12■■□□□ 1.45
SMIM4-205ENST00000491607 ERBB4Q15303 1308 aa24.11■■□□□ 1.45
SMIM4-205ENST00000491607 CCDC93Q567U6 631 aa24.11■■□□□ 1.45
SMIM4-205ENST00000491607 SMC1BQ8NDV3 1235 aa24.11■■□□□ 1.45
SMIM4-205ENST00000491607 BABAM1Q9NWV8 329 aa24.11■■□□□ 1.45
SMIM4-205ENST00000491607 ABCC12Q96J65 1359 aa24.09■■□□□ 1.45
SMIM4-205ENST00000491607 ALDH1B1P30837 517 aa24.09■■□□□ 1.45
SMIM4-205ENST00000491607 C7orf43Q8WVR3 580 aa24.09■■□□□ 1.45
SMIM4-205ENST00000491607 RUNDC1Q96C34 613 aa24.09■■□□□ 1.45
SMIM4-205ENST00000491607 LAS1LQ9Y4W2 734 aaKnown RBP24.08■■□□□ 1.45
SMIM4-205ENST00000491607 UBN2Q6ZU65 1347 aa24.08■■□□□ 1.44
SMIM4-205ENST00000491607 NUP98P52948 1817 aa24.07■■□□□ 1.44
SMIM4-205ENST00000491607 WDR90Q96KV7 1748 aa24.07■■□□□ 1.44
SMIM4-205ENST00000491607 HTRA3P83110 453 aa24.07■■□□□ 1.44
SMIM4-205ENST00000491607 OLFM4Q6UX06 510 aa24.07■■□□□ 1.44
SMIM4-205ENST00000491607 GIGYF2Q6Y7W6 1299 aaKnown RBP24.07■■□□□ 1.44
SMIM4-205ENST00000491607 NECTIN2Q92692 538 aa24.07■■□□□ 1.44
SMIM4-205ENST00000491607 ANXA1P04083 346 aa24.06■■□□□ 1.44
SMIM4-205ENST00000491607 PDIA6Q15084 440 aa24.06■■□□□ 1.44
SMIM4-205ENST00000491607 SUSD4Q5VX71 490 aa24.06■■□□□ 1.44
SMIM4-205ENST00000491607 ADAMTS8Q9UP79 889 aa24.06■■□□□ 1.44
SMIM4-205ENST00000491607 IBTKQ9P2D0 1353 aaPredicted RBP24.05■■□□□ 1.44
SMIM4-205ENST00000491607 FKBP4Q02790 459 aaKnown RBP eCLIP24.05■■□□□ 1.44
SMIM4-205ENST00000491607 PROSER3Q2NL68 480 aa24.05■■□□□ 1.44
SMIM4-205ENST00000491607 ZNF34Q8IZ26 560 aa24.05■■□□□ 1.44
SMIM4-205ENST00000491607 RTKN2Q8IZC4 609 aa24.05■■□□□ 1.44
SMIM4-205ENST00000491607 DNAJC5GQ8N7S2 189 aa24.05■■□□□ 1.44
SMIM4-205ENST00000491607 RPGRQ92834 1020 aaKnown RBP24.05■■□□□ 1.44
SMIM4-205ENST00000491607 DICER1Q9UPY3 1922 aaKnown RBP24.05■■□□□ 1.44
SMIM4-205ENST00000491607 POTECB2RU33 542 aa24.04■■□□□ 1.44
SMIM4-205ENST00000491607 DDNO94850 711 aaPredicted RBP24.04■■□□□ 1.44
SMIM4-205ENST00000491607 CRY2Q49AN0 593 aa24.04■■□□□ 1.44
SMIM4-205ENST00000491607 LRP10Q7Z4F1 713 aa24.04■■□□□ 1.44
SMIM4-205ENST00000491607 PRKRIP1Q9H875 184 aaPredicted RBP24.04■■□□□ 1.44
SMIM4-205ENST00000491607 ZNF277Q9NRM2 450 aaPredicted RBP24.04■■□□□ 1.44
SMIM4-205ENST00000491607 TRIM35Q9UPQ4 493 aa24.04■■□□□ 1.44
SMIM4-205ENST00000491607 AIMP1Q12904 312 aaKnown RBP24.03■■□□□ 1.44
SMIM4-205ENST00000491607 PPP1R42Q7Z4L9 355 aa24.03■■□□□ 1.44
SMIM4-205ENST00000491607 CHL1O00533 1208 aa24.02■■□□□ 1.44
SMIM4-205ENST00000491607 NTSR2O95665 410 aa24.02■■□□□ 1.44
SMIM4-205ENST00000491607 KRT24Q2M2I5 525 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms