RNA–Protein interactions for RNA: ENST00000491160.1

PBX3-208, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-208ENST00000491160 CARD14Q9BXL6 1004 aa9.05□□□□□ -0.96
PBX3-208ENST00000491160 SRP68Q9UHB9 627 aaKnown RBP9.05□□□□□ -0.96
PBX3-208ENST00000491160 COL5A3P25940 1745 aaPredicted RBP9.05□□□□□ -0.96
PBX3-208ENST00000491160 KDRP35968 1356 aa9.04□□□□□ -0.96
PBX3-208ENST00000491160 KIF24Q5T7B8 1368 aa9.04□□□□□ -0.96
PBX3-208ENST00000491160 TONSLQ96HA7 1378 aa9.04□□□□□ -0.96
PBX3-208ENST00000491160 RPS6KA4O75676 772 aa9.04□□□□□ -0.96
PBX3-208ENST00000491160 HSPA1AP0DMV8 641 aaKnown RBP9.04□□□□□ -0.96
PBX3-208ENST00000491160 HSPA1BP0DMV9 641 aaKnown RBP9.04□□□□□ -0.96
PBX3-208ENST00000491160 DDR1Q08345 913 aa9.04□□□□□ -0.96
PBX3-208ENST00000491160 MICALL2Q8IY33 904 aa9.04□□□□□ -0.96
PBX3-208ENST00000491160 SMC1BQ8NDV3 1235 aa9.04□□□□□ -0.96
PBX3-208ENST00000491160 NCAPD2Q15021 1401 aa9.04□□□□□ -0.96
PBX3-208ENST00000491160 TNRC6CQ9HCJ0 1690 aaKnown RBP9.04□□□□□ -0.96
PBX3-208ENST00000491160 RASSF7Q02833 373 aa9.03□□□□□ -0.96
PBX3-208ENST00000491160 RC3H1Q5TC82 1133 aaKnown RBP9.03□□□□□ -0.96
PBX3-208ENST00000491160 WASHC2AQ641Q2 1341 aa9.03□□□□□ -0.96
PBX3-208ENST00000491160 CNTNAP4Q9C0A0 1308 aa9.03□□□□□ -0.96
PBX3-208ENST00000491160 CCDC88AQ3V6T2 1871 aa9.02□□□□□ -0.96
PBX3-208ENST00000491160 PTCD1O75127 700 aaKnown RBP9.02□□□□□ -0.97
PBX3-208ENST00000491160 ZNF687Q8N1G0 1237 aa9.02□□□□□ -0.97
PBX3-208ENST00000491160 ZNF831Q5JPB2 1677 aa9.01□□□□□ -0.97
PBX3-208ENST00000491160 ERVV-2B6SEH9 535 aa9.01□□□□□ -0.97
PBX3-208ENST00000491160 SLC24A1O60721 1099 aa9.01□□□□□ -0.97
PBX3-208ENST00000491160 TNNT2P45379 298 aaPredicted RBP9.01□□□□□ -0.97
PBX3-208ENST00000491160 CRKLP46109 303 aaKnown RBP9.01□□□□□ -0.97
PBX3-208ENST00000491160 EIF4A2Q14240 407 aaKnown RBP9.01□□□□□ -0.97
PBX3-208ENST00000491160 ANKRD26Q9UPS8 1709 aa9.01□□□□□ -0.97
PBX3-208ENST00000491160 POLRMTO00411 1230 aaKnown RBP9□□□□□ -0.97
PBX3-208ENST00000491160 CABP4P57796 275 aa9□□□□□ -0.97
PBX3-208ENST00000491160 POLKQ9UBT6 870 aa9□□□□□ -0.97
PBX3-208ENST00000491160 USP42Q9H9J4 1324 aaKnown RBP9□□□□□ -0.97
PBX3-208ENST00000491160 AFDNP55196 1824 aaKnown RBP8.99□□□□□ -0.97
PBX3-208ENST00000491160 GLTPD2A6NH11 291 aa8.99□□□□□ -0.97
PBX3-208ENST00000491160 VEGFAP15692 232 aaPredicted RBP8.99□□□□□ -0.97
PBX3-208ENST00000491160 TM4SF1P30408 202 aa8.99□□□□□ -0.97
PBX3-208ENST00000491160 USPL1Q5W0Q7 1092 aa8.99□□□□□ -0.97
PBX3-208ENST00000491160 NFATC2IPQ8NCF5 419 aa8.99□□□□□ -0.97
PBX3-208ENST00000491160 KDM6AO15550 1401 aaPredicted RBP8.98□□□□□ -0.97
PBX3-208ENST00000491160 TJP1Q07157 1748 aa8.98□□□□□ -0.97
PBX3-208ENST00000491160 TIAM2Q8IVF5 1701 aa8.98□□□□□ -0.97
PBX3-208ENST00000491160 POTECB2RU33 542 aa8.98□□□□□ -0.97
PBX3-208ENST00000491160 LMNB1P20700 586 aa8.98□□□□□ -0.97
PBX3-208ENST00000491160 ZNF530Q6P9A1 599 aaPredicted RBP8.98□□□□□ -0.97
PBX3-208ENST00000491160 INTS5Q6P9B9 1019 aaKnown RBP8.98□□□□□ -0.97
PBX3-208ENST00000491160 MKRN1Q9UHC7 482 aaKnown RBP8.98□□□□□ -0.97
PBX3-208ENST00000491160 TNRC18O15417 2968 aaPredicted RBP8.98□□□□□ -0.97
PBX3-208ENST00000491160 ADAMTS7Q9UKP4 1686 aa8.97□□□□□ -0.97
PBX3-208ENST00000491160 RIOK3O14730 519 aaKnown RBP8.97□□□□□ -0.97
PBX3-208ENST00000491160 ZPR1O75312 459 aa8.97□□□□□ -0.97
PBX3-208ENST00000491160 HSP90AB1P08238 724 aaKnown RBP8.97□□□□□ -0.97
PBX3-208ENST00000491160 MTHFSP49914 203 aa8.97□□□□□ -0.97
PBX3-208ENST00000491160 PLEKHO1Q53GL0 409 aaPredicted RBP8.97□□□□□ -0.97
PBX3-208ENST00000491160 GPR153Q6NV75 609 aa8.97□□□□□ -0.97
PBX3-208ENST00000491160 NFIXQ14938 502 aa8.96□□□□□ -0.98
PBX3-208ENST00000491160 CDCA8Q53HL2 280 aa8.96□□□□□ -0.98
PBX3-208ENST00000491160 AEBP1Q8IUX7 1158 aa8.96□□□□□ -0.98
PBX3-208ENST00000491160 DNAJC10Q8IXB1 793 aa8.96□□□□□ -0.98
PBX3-208ENST00000491160 ZC3H4Q9UPT8 1303 aaKnown RBP8.96□□□□□ -0.98
PBX3-208ENST00000491160 DLEC1Q9Y238 1755 aa8.95□□□□□ -0.98
PBX3-208ENST00000491160 NFKBIEO00221 500 aa8.95□□□□□ -0.98
PBX3-208ENST00000491160 FOXN1O15353 648 aa8.95□□□□□ -0.98
PBX3-208ENST00000491160 SERPINB2P05120 415 aa8.95□□□□□ -0.98
PBX3-208ENST00000491160 C2CD5Q86YS7 1000 aa8.95□□□□□ -0.98
PBX3-208ENST00000491160 TTLL6Q8N841 843 aa8.95□□□□□ -0.98
PBX3-208ENST00000491160 POLR3GLQ9BT43 218 aa8.95□□□□□ -0.98
PBX3-208ENST00000491160 AMOTQ4VCS5 1084 aa8.94□□□□□ -0.98
PBX3-208ENST00000491160 C1orf141Q5JVX7 400 aa8.94□□□□□ -0.98
PBX3-208ENST00000491160 TMEM92Q6UXU6 159 aa8.94□□□□□ -0.98
PBX3-208ENST00000491160 CCDC24Q8N4L8 307 aa8.94□□□□□ -0.98
PBX3-208ENST00000491160 CARMIL3Q8ND23 1372 aa8.94□□□□□ -0.98
PBX3-208ENST00000491160 H0YIN7 160 aa8.93□□□□□ -0.98
PBX3-208ENST00000491160 C21orf2O43822 256 aa8.93□□□□□ -0.98
PBX3-208ENST00000491160 SLC39A6Q13433 755 aa8.93□□□□□ -0.98
PBX3-208ENST00000491160 BICDL1Q6ZP65 573 aa8.93□□□□□ -0.98
PBX3-208ENST00000491160 ZNF622Q969S3 477 aaKnown RBP eCLIP8.93□□□□□ -0.98
PBX3-208ENST00000491160 BCL2L12Q9HB09 334 aa8.93□□□□□ -0.98
PBX3-208ENST00000491160 NARFQ9UHQ1 456 aa8.93□□□□□ -0.98
PBX3-208ENST00000491160 TAOK2Q9UL54 1235 aa8.93□□□□□ -0.98
PBX3-208ENST00000491160 SOS1Q07889 1333 aaPredicted RBP8.93□□□□□ -0.98
PBX3-208ENST00000491160 NRXN2Q9P2S2 1712 aa8.93□□□□□ -0.98
PBX3-208ENST00000491160 SCN11AQ9UI33 1791 aa8.93□□□□□ -0.98
PBX3-208ENST00000491160 DICER1Q9UPY3 1922 aaKnown RBP8.93□□□□□ -0.98
PBX3-208ENST00000491160 DDNO94850 711 aaPredicted RBP8.92□□□□□ -0.98
PBX3-208ENST00000491160 CYP19A1P11511 503 aaPredicted RBP8.92□□□□□ -0.98
PBX3-208ENST00000491160 ERFEQ4G0M1 354 aa8.92□□□□□ -0.98
PBX3-208ENST00000491160 SULT6B1Q6IMI4 303 aa8.92□□□□□ -0.98
PBX3-208ENST00000491160 LGR6Q9HBX8 967 aa8.92□□□□□ -0.98
PBX3-208ENST00000491160 ZBTB1Q9Y2K1 713 aa8.92□□□□□ -0.98
PBX3-208ENST00000491160 CACNA1SQ13698 1873 aa8.91□□□□□ -0.98
PBX3-208ENST00000491160 ANKRD31Q8N7Z5 1873 aa8.91□□□□□ -0.98
PBX3-208ENST00000491160 VIRMAQ69YN4 1812 aaKnown RBP8.91□□□□□ -0.98
PBX3-208ENST00000491160 COL15A1P39059 1388 aa8.91□□□□□ -0.98
PBX3-208ENST00000491160 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.91□□□□□ -0.98
PBX3-208ENST00000491160 CANXP27824 592 aaKnown RBP8.91□□□□□ -0.98
PBX3-208ENST00000491160 ZFP91Q96JP5 570 aaPredicted RBP8.91□□□□□ -0.98
PBX3-208ENST00000491160 FER1L6Q2WGJ9 1857 aa8.91□□□□□ -0.98
PBX3-208ENST00000491160 VEGFBP49765 207 aa8.9□□□□□ -0.98
PBX3-208ENST00000491160 ARSIQ5FYB1 569 aa8.9□□□□□ -0.98
PBX3-208ENST00000491160 MS4A4AQ96JQ5 239 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms