RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 HLFQ16534 295 aa19.86■□□□□ 0.77
COL27A1-206ENST00000490831 DALRD3Q5D0E6 543 aaKnown RBP19.86■□□□□ 0.77
COL27A1-206ENST00000490831 PDZRN3Q9UPQ7 1066 aa19.86■□□□□ 0.77
COL27A1-206ENST00000490831 ADCY9O60503 1353 aa19.85■□□□□ 0.77
COL27A1-206ENST00000490831 MAP3K15Q6ZN16 1313 aa19.85■□□□□ 0.77
COL27A1-206ENST00000490831 HOXB7P09629 217 aa19.85■□□□□ 0.77
COL27A1-206ENST00000490831 CALD1Q05682 793 aaKnown RBP19.85■□□□□ 0.77
COL27A1-206ENST00000490831 NCBP3Q53F19 620 aaKnown RBP19.85■□□□□ 0.77
COL27A1-206ENST00000490831 TTLL7Q6ZT98 887 aa19.85■□□□□ 0.77
COL27A1-206ENST00000490831 CNBD1Q8NA66 436 aa19.85■□□□□ 0.77
COL27A1-206ENST00000490831 IFT57Q9NWB7 429 aa19.85■□□□□ 0.77
COL27A1-206ENST00000490831 ATP10DQ9P241 1426 aa19.85■□□□□ 0.77
COL27A1-206ENST00000490831 MYL6BP14649 208 aa19.84■□□□□ 0.77
COL27A1-206ENST00000490831 CCDC27Q2M243 656 aa19.84■□□□□ 0.77
COL27A1-206ENST00000490831 KRT24Q2M2I5 525 aa19.84■□□□□ 0.77
COL27A1-206ENST00000490831 LAS1LQ9Y4W2 734 aaKnown RBP19.84■□□□□ 0.77
COL27A1-206ENST00000490831 EIF2S2P20042 333 aaKnown RBP19.83■□□□□ 0.77
COL27A1-206ENST00000490831 PDE6BP35913 854 aa19.83■□□□□ 0.77
COL27A1-206ENST00000490831 C2CD5Q86YS7 1000 aa19.83■□□□□ 0.77
COL27A1-206ENST00000490831 MBIPQ9NS73 344 aa19.83■□□□□ 0.77
COL27A1-206ENST00000490831 NIP7Q9Y221 180 aaKnown RBP eCLIP19.83■□□□□ 0.77
COL27A1-206ENST00000490831 NUP98P52948 1817 aa19.82■□□□□ 0.76
COL27A1-206ENST00000490831 H0YIN7 160 aa19.82■□□□□ 0.76
COL27A1-206ENST00000490831 GNAI1P63096 354 aa19.82■□□□□ 0.76
COL27A1-206ENST00000490831 PROSER3Q2NL68 480 aa19.82■□□□□ 0.76
COL27A1-206ENST00000490831 KIF6Q6ZMV9 814 aa19.82■□□□□ 0.76
COL27A1-206ENST00000490831 NBPF5PQ86XG9 351 aaPredicted RBP19.82■□□□□ 0.76
COL27A1-206ENST00000490831 NGEFQ8N5V2 710 aa19.82■□□□□ 0.76
COL27A1-206ENST00000490831 ST5P78524 1137 aa19.81■□□□□ 0.76
COL27A1-206ENST00000490831 DDX21Q9NR30 783 aaKnown RBP eCLIP19.81■□□□□ 0.76
COL27A1-206ENST00000490831 KLRG2A4D1S0 409 aaPredicted RBP19.8■□□□□ 0.76
COL27A1-206ENST00000490831 TPTE2Q6XPS3 522 aa19.8■□□□□ 0.76
COL27A1-206ENST00000490831 GIGYF2Q6Y7W6 1299 aaKnown RBP19.8■□□□□ 0.76
COL27A1-206ENST00000490831 CCDC24Q8N4L8 307 aa19.8■□□□□ 0.76
COL27A1-206ENST00000490831 TTLL6Q8N841 843 aa19.8■□□□□ 0.76
COL27A1-206ENST00000490831 IBTKQ9P2D0 1353 aaPredicted RBP19.8■□□□□ 0.76
COL27A1-206ENST00000490831 COL11A2P13942 1736 aaPredicted RBP19.79■□□□□ 0.76
COL27A1-206ENST00000490831 ARHGAP27Q6ZUM4 889 aa19.79■□□□□ 0.76
COL27A1-206ENST00000490831 ANXA1P04083 346 aa19.78■□□□□ 0.76
COL27A1-206ENST00000490831 DUSP27Q5VZP5 1158 aa19.78■□□□□ 0.76
COL27A1-206ENST00000490831 WWC1Q8IX03 1113 aa19.78■□□□□ 0.76
COL27A1-206ENST00000490831 ZNF34Q8IZ26 560 aa19.78■□□□□ 0.76
COL27A1-206ENST00000490831 ZBTB3Q9H5J0 574 aa19.78■□□□□ 0.76
COL27A1-206ENST00000490831 NPHP1O15259 732 aa19.77■□□□□ 0.76
COL27A1-206ENST00000490831 SRGNP10124 158 aa19.77■□□□□ 0.76
COL27A1-206ENST00000490831 HDGFL1Q5TGJ6 251 aa19.77■□□□□ 0.76
COL27A1-206ENST00000490831 NECTIN2Q92692 538 aa19.77■□□□□ 0.76
COL27A1-206ENST00000490831 UBN2Q6ZU65 1347 aa19.76■□□□□ 0.75
COL27A1-206ENST00000490831 STYK1Q6J9G0 422 aa19.76■□□□□ 0.75
COL27A1-206ENST00000490831 COPS6Q7L5N1 327 aa19.76■□□□□ 0.75
COL27A1-206ENST00000490831 NYXQ9GZU5 481 aa19.76■□□□□ 0.75
COL27A1-206ENST00000490831 CHPF2Q9P2E5 772 aa19.76■□□□□ 0.75
COL27A1-206ENST00000490831 DBF4Q9UBU7 674 aaPredicted RBP19.76■□□□□ 0.75
COL27A1-206ENST00000490831 RIC1Q4ADV7 1423 aa19.76■□□□□ 0.75
COL27A1-206ENST00000490831 IL16Q14005 1332 aa19.76■□□□□ 0.75
COL27A1-206ENST00000490831 XAGE3Q8WTP9 111 aa19.75■□□□□ 0.75
COL27A1-206ENST00000490831 MASTLQ96GX5 879 aa19.75■□□□□ 0.75
COL27A1-206ENST00000490831 PARP10Q53GL7 1025 aa19.74■□□□□ 0.75
COL27A1-206ENST00000490831 CNKSR1Q969H4 720 aa19.74■□□□□ 0.75
COL27A1-206ENST00000490831 ZNF622Q969S3 477 aaKnown RBP eCLIP19.74■□□□□ 0.75
COL27A1-206ENST00000490831 SUSD4Q5VX71 490 aa19.73■□□□□ 0.75
COL27A1-206ENST00000490831 ARFGEF2Q9Y6D5 1785 aa19.72■□□□□ 0.75
COL27A1-206ENST00000490831 ABCC12Q96J65 1359 aa19.72■□□□□ 0.75
COL27A1-206ENST00000490831 FAM177BA6PVY3 158 aa19.72■□□□□ 0.75
COL27A1-206ENST00000490831 NTSR2O95665 410 aa19.72■□□□□ 0.75
COL27A1-206ENST00000490831 GPTP24298 496 aa19.72■□□□□ 0.75
COL27A1-206ENST00000490831 HSP90AB3PQ58FF7 597 aa19.72■□□□□ 0.75
COL27A1-206ENST00000490831 C8orf58Q8NAV2 365 aa19.72■□□□□ 0.75
COL27A1-206ENST00000490831 HYPKQ9NX55 129 aa19.72■□□□□ 0.75
COL27A1-206ENST00000490831 SBF1O95248 1867 aa19.71■□□□□ 0.75
COL27A1-206ENST00000490831 NPR1P16066 1061 aa19.71■□□□□ 0.75
COL27A1-206ENST00000490831 AIMP1Q12904 312 aaKnown RBP19.71■□□□□ 0.75
COL27A1-206ENST00000490831 CRY2Q49AN0 593 aa19.71■□□□□ 0.75
COL27A1-206ENST00000490831 C9orf131Q5VYM1 1079 aa19.71■□□□□ 0.75
COL27A1-206ENST00000490831 ANKRD36CQ5JPF3 1778 aa19.7■□□□□ 0.74
COL27A1-206ENST00000490831 SLX4Q8IY92 1834 aa19.7■□□□□ 0.74
COL27A1-206ENST00000490831 GTF2E1P29083 439 aaPredicted RBP19.7■□□□□ 0.74
COL27A1-206ENST00000490831 TCIRG1Q13488 830 aa19.7■□□□□ 0.74
COL27A1-206ENST00000490831 ERFEQ4G0M1 354 aa19.7■□□□□ 0.74
COL27A1-206ENST00000490831 PPP1R42Q7Z4L9 355 aa19.7■□□□□ 0.74
COL27A1-206ENST00000490831 NUTM1Q86Y26 1132 aa19.7■□□□□ 0.74
COL27A1-206ENST00000490831 PLBD2Q8NHP8 589 aa19.7■□□□□ 0.74
COL27A1-206ENST00000490831 CHMP4AQ9BY43 222 aa19.7■□□□□ 0.74
COL27A1-206ENST00000490831 TNRC6CQ9HCJ0 1690 aaKnown RBP19.7■□□□□ 0.74
COL27A1-206ENST00000490831 RNF123Q5XPI4 1314 aa19.7■□□□□ 0.74
COL27A1-206ENST00000490831 NFKBIEO00221 500 aa19.69■□□□□ 0.74
COL27A1-206ENST00000490831 PRPF40BQ6NWY9 871 aaKnown RBP19.69■□□□□ 0.74
COL27A1-206ENST00000490831 WDR63Q8IWG1 891 aa19.69■□□□□ 0.74
COL27A1-206ENST00000490831 C7orf43Q8WVR3 580 aa19.69■□□□□ 0.74
COL27A1-206ENST00000490831 SENP3-EIF4A1A0A087X0R7 540 aa19.68■□□□□ 0.74
COL27A1-206ENST00000490831 ELL2O00472 640 aaPredicted RBP19.68■□□□□ 0.74
COL27A1-206ENST00000490831 C21orf2O43822 256 aa19.68■□□□□ 0.74
COL27A1-206ENST00000490831 RASSF7Q02833 373 aa19.68■□□□□ 0.74
COL27A1-206ENST00000490831 SLC10A5Q5PT55 438 aa19.68■□□□□ 0.74
COL27A1-206ENST00000490831 ANKRD13DQ6ZTN6 518 aa19.68■□□□□ 0.74
COL27A1-206ENST00000490831 NLRP10Q86W26 655 aa19.68■□□□□ 0.74
COL27A1-206ENST00000490831 FAM9BQ8IZU0 186 aa19.68■□□□□ 0.74
COL27A1-206ENST00000490831 TSPYL6Q8N831 410 aa19.68■□□□□ 0.74
COL27A1-206ENST00000490831 TSR2Q969E8 191 aaKnown RBP19.68■□□□□ 0.74
COL27A1-206ENST00000490831 GPBP1L1Q9HC44 474 aaPredicted RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms