RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 LMNB1P20700 586 aa27.73■■■□□ 2.03
SYNE4-205ENST00000490730 NBPF5PQ86XG9 351 aaPredicted RBP27.73■■■□□ 2.03
SYNE4-205ENST00000490730 PNISRQ8TF01 805 aaKnown RBP27.73■■■□□ 2.03
SYNE4-205ENST00000490730 CLEC4GQ6UXB4 293 aa27.71■■■□□ 2.03
SYNE4-205ENST00000490730 TIAM2Q8IVF5 1701 aa27.71■■■□□ 2.03
SYNE4-205ENST00000490730 TNRC6CQ9HCJ0 1690 aaKnown RBP27.71■■■□□ 2.03
SYNE4-205ENST00000490730 C21orf2O43822 256 aa27.7■■■□□ 2.02
SYNE4-205ENST00000490730 RALBP1Q15311 655 aa27.7■■■□□ 2.02
SYNE4-205ENST00000490730 PRELPP51888 382 aa27.69■■■□□ 2.02
SYNE4-205ENST00000490730 DDX10Q13206 875 aaKnown RBP27.69■■■□□ 2.02
SYNE4-205ENST00000490730 NGEFQ8N5V2 710 aa27.69■■■□□ 2.02
SYNE4-205ENST00000490730 RRAGCQ9HB90 399 aa27.69■■■□□ 2.02
SYNE4-205ENST00000490730 FAM177BA6PVY3 158 aa27.68■■■□□ 2.02
SYNE4-205ENST00000490730 NFKBIEO00221 500 aa27.68■■■□□ 2.02
SYNE4-205ENST00000490730 NIP7Q9Y221 180 aaKnown RBP eCLIP27.68■■■□□ 2.02
SYNE4-205ENST00000490730 ZC3H4Q9UPT8 1303 aaKnown RBP27.67■■■□□ 2.02
SYNE4-205ENST00000490730 RBM46Q8TBY0 533 aaKnown RBP27.66■■■□□ 2.02
SYNE4-205ENST00000490730 CNKSR1Q969H4 720 aa27.66■■■□□ 2.02
SYNE4-205ENST00000490730 SLX4Q8IY92 1834 aa27.65■■■□□ 2.02
SYNE4-205ENST00000490730 SRGNP10124 158 aa27.65■■■□□ 2.02
SYNE4-205ENST00000490730 EIF4A1P60842 406 aaKnown RBP27.65■■■□□ 2.02
SYNE4-205ENST00000490730 STYK1Q6J9G0 422 aa27.65■■■□□ 2.02
SYNE4-205ENST00000490730 MASTLQ96GX5 879 aa27.65■■■□□ 2.02
SYNE4-205ENST00000490730 RRP7AQ9Y3A4 280 aaKnown RBP27.65■■■□□ 2.02
SYNE4-205ENST00000490730 FER1L6Q2WGJ9 1857 aa27.64■■■□□ 2.02
SYNE4-205ENST00000490730 APLP1P51693 650 aa27.64■■■□□ 2.02
SYNE4-205ENST00000490730 HLFQ16534 295 aa27.64■■■□□ 2.02
SYNE4-205ENST00000490730 PRPF40BQ6NWY9 871 aaKnown RBP27.64■■■□□ 2.02
SYNE4-205ENST00000490730 ARFGEF2Q9Y6D5 1785 aa27.63■■■□□ 2.01
SYNE4-205ENST00000490730 TPTE2Q6XPS3 522 aa27.63■■■□□ 2.01
SYNE4-205ENST00000490730 MYL6BP14649 208 aa27.62■■■□□ 2.01
SYNE4-205ENST00000490730 RIPK4P57078 832 aa27.62■■■□□ 2.01
SYNE4-205ENST00000490730 TSPYL4Q9UJ04 414 aa27.62■■■□□ 2.01
SYNE4-205ENST00000490730 GLTPD2A6NH11 291 aa27.61■■■□□ 2.01
SYNE4-205ENST00000490730 RGL2O15211 777 aa27.61■■■□□ 2.01
SYNE4-205ENST00000490730 GTF2E1P29083 439 aaPredicted RBP27.61■■■□□ 2.01
SYNE4-205ENST00000490730 KIF6Q6ZMV9 814 aa27.61■■■□□ 2.01
SYNE4-205ENST00000490730 TAOK3Q9H2K8 898 aa27.61■■■□□ 2.01
SYNE4-205ENST00000490730 MYBBP1AQ9BQG0 1328 aaKnown RBP27.6■■■□□ 2.01
SYNE4-205ENST00000490730 ERFEQ4G0M1 354 aa27.59■■■□□ 2.01
SYNE4-205ENST00000490730 NUP98P52948 1817 aa27.59■■■□□ 2.01
SYNE4-205ENST00000490730 DICER1Q9UPY3 1922 aaKnown RBP27.59■■■□□ 2.01
SYNE4-205ENST00000490730 NPR1P16066 1061 aa27.58■■■□□ 2.01
SYNE4-205ENST00000490730 SOGA3Q5TF21 947 aa27.58■■■□□ 2.01
SYNE4-205ENST00000490730 FSTL1Q12841 308 aa27.57■■■□□ 2
SYNE4-205ENST00000490730 TTLL7Q6ZT98 887 aa27.57■■■□□ 2
SYNE4-205ENST00000490730 CCDC146Q8IYE0 955 aa27.57■■■□□ 2
SYNE4-205ENST00000490730 MAP3K15Q6ZN16 1313 aa27.57■■■□□ 2
SYNE4-205ENST00000490730 WDR90Q96KV7 1748 aa27.56■■■□□ 2
SYNE4-205ENST00000490730 VEGFAP15692 232 aaPredicted RBP27.56■■■□□ 2
SYNE4-205ENST00000490730 TMPOP42166 694 aaKnown RBP27.56■■■□□ 2
SYNE4-205ENST00000490730 LMOD3Q0VAK6 560 aa27.56■■■□□ 2
SYNE4-205ENST00000490730 ZBTB3Q9H5J0 574 aa27.56■■■□□ 2
SYNE4-205ENST00000490730 ERVV-1B6SEH8 477 aa27.55■■■□□ 2
SYNE4-205ENST00000490730 NEUROD2Q15784 382 aa27.55■■■□□ 2
SYNE4-205ENST00000490730 DPY19L2Q6NUT2 758 aa27.55■■■□□ 2
SYNE4-205ENST00000490730 LTBP3Q9NS15 1303 aa27.55■■■□□ 2
SYNE4-205ENST00000490730 WDR43Q15061 677 aaKnown RBP eCLIP27.54■■■□□ 2
SYNE4-205ENST00000490730 NYXQ9GZU5 481 aa27.54■■■□□ 2
SYNE4-205ENST00000490730 EIF2S2P20042 333 aaKnown RBP27.53■■■□□ 2
SYNE4-205ENST00000490730 GPTP24298 496 aa27.53■■■□□ 2
SYNE4-205ENST00000490730 NUTM1Q86Y26 1132 aa27.53■■■□□ 2
SYNE4-205ENST00000490730 SMC1BQ8NDV3 1235 aa27.53■■■□□ 2
SYNE4-205ENST00000490730 KLRG2A4D1S0 409 aaPredicted RBP27.52■■■□□ 2
SYNE4-205ENST00000490730 CCDC93Q567U6 631 aa27.52■■■□□ 2
SYNE4-205ENST00000490730 ABCC12Q96J65 1359 aa27.51■■□□□ 1.99
SYNE4-205ENST00000490730 ERBB4Q15303 1308 aa27.51■■□□□ 1.99
SYNE4-205ENST00000490730 HTRA3P83110 453 aa27.51■■□□□ 1.99
SYNE4-205ENST00000490730 OLFM4Q6UX06 510 aa27.49■■□□□ 1.99
SYNE4-205ENST00000490730 C7orf43Q8WVR3 580 aa27.49■■□□□ 1.99
SYNE4-205ENST00000490730 UBN2Q6ZU65 1347 aa27.48■■□□□ 1.99
SYNE4-205ENST00000490730 ALDH1B1P30837 517 aa27.48■■□□□ 1.99
SYNE4-205ENST00000490730 NECTIN2Q92692 538 aa27.48■■□□□ 1.99
SYNE4-205ENST00000490730 BABAM1Q9NWV8 329 aa27.48■■□□□ 1.99
SYNE4-205ENST00000490730 LAS1LQ9Y4W2 734 aaKnown RBP27.48■■□□□ 1.99
SYNE4-205ENST00000490730 ANXA1P04083 346 aa27.47■■□□□ 1.99
SYNE4-205ENST00000490730 RUNDC1Q96C34 613 aa27.47■■□□□ 1.99
SYNE4-205ENST00000490730 PROSER3Q2NL68 480 aa27.46■■□□□ 1.99
SYNE4-205ENST00000490730 SUSD4Q5VX71 490 aa27.46■■□□□ 1.99
SYNE4-205ENST00000490730 DNAJC5GQ8N7S2 189 aa27.46■■□□□ 1.99
SYNE4-205ENST00000490730 POTECB2RU33 542 aa27.45■■□□□ 1.98
SYNE4-205ENST00000490730 DDNO94850 711 aaPredicted RBP27.45■■□□□ 1.98
SYNE4-205ENST00000490730 FKBP4Q02790 459 aaKnown RBP eCLIP27.45■■□□□ 1.98
SYNE4-205ENST00000490730 GIGYF2Q6Y7W6 1299 aaKnown RBP27.45■■□□□ 1.98
SYNE4-205ENST00000490730 RPGRQ92834 1020 aaKnown RBP27.45■■□□□ 1.98
SYNE4-205ENST00000490730 ZNF277Q9NRM2 450 aaPredicted RBP27.45■■□□□ 1.98
SYNE4-205ENST00000490730 IBTKQ9P2D0 1353 aaPredicted RBP27.45■■□□□ 1.98
SYNE4-205ENST00000490730 ZNF34Q8IZ26 560 aa27.44■■□□□ 1.98
SYNE4-205ENST00000490730 RTKN2Q8IZC4 609 aa27.44■■□□□ 1.98
SYNE4-205ENST00000490730 PDIA6Q15084 440 aa27.43■■□□□ 1.98
SYNE4-205ENST00000490730 CRY2Q49AN0 593 aa27.43■■□□□ 1.98
SYNE4-205ENST00000490730 ADAMTS8Q9UP79 889 aa27.43■■□□□ 1.98
SYNE4-205ENST00000490730 PPP1R42Q7Z4L9 355 aa27.42■■□□□ 1.98
SYNE4-205ENST00000490730 NTSR2O95665 410 aa27.41■■□□□ 1.98
SYNE4-205ENST00000490730 AIMP1Q12904 312 aaKnown RBP27.41■■□□□ 1.98
SYNE4-205ENST00000490730 KRT24Q2M2I5 525 aa27.41■■□□□ 1.98
SYNE4-205ENST00000490730 LRP10Q7Z4F1 713 aa27.41■■□□□ 1.98
SYNE4-205ENST00000490730 TRIM35Q9UPQ4 493 aa27.41■■□□□ 1.98
SYNE4-205ENST00000490730 PRKRIP1Q9H875 184 aaPredicted RBP27.4■■□□□ 1.98
SYNE4-205ENST00000490730 RIC1Q4ADV7 1423 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms