RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 COL15A1P39059 1388 aa13.91□□□□□ -0.18
VARS2-210ENST00000490699 ZPR1O75312 459 aa13.9□□□□□ -0.18
VARS2-210ENST00000490699 ANXA1P04083 346 aa13.9□□□□□ -0.18
VARS2-210ENST00000490699 SSFA2P28290 1259 aa13.9□□□□□ -0.18
VARS2-210ENST00000490699 RFC4P35249 363 aa13.9□□□□□ -0.18
VARS2-210ENST00000490699 PIP4K2AP48426 406 aaPredicted RBP13.9□□□□□ -0.18
VARS2-210ENST00000490699 RRP1P56182 461 aaKnown RBP13.9□□□□□ -0.18
VARS2-210ENST00000490699 NEXNQ0ZGT2 675 aa13.9□□□□□ -0.18
VARS2-210ENST00000490699 TRAPPC3LQ5T215 181 aa13.9□□□□□ -0.18
VARS2-210ENST00000490699 INTS5Q6P9B9 1019 aaKnown RBP13.9□□□□□ -0.18
VARS2-210ENST00000490699 COPS6Q7L5N1 327 aa13.9□□□□□ -0.18
VARS2-210ENST00000490699 XAGE3Q8WTP9 111 aa13.9□□□□□ -0.18
VARS2-210ENST00000490699 NBPF26B4DH59 902 aa13.89□□□□□ -0.19
VARS2-210ENST00000490699 PDIA6Q15084 440 aa13.89□□□□□ -0.19
VARS2-210ENST00000490699 PROSER3Q2NL68 480 aa13.89□□□□□ -0.19
VARS2-210ENST00000490699 HSP90AB3PQ58FF7 597 aa13.89□□□□□ -0.19
VARS2-210ENST00000490699 NBPF10Q6P3W6 841 aaKnown RBP13.89□□□□□ -0.19
VARS2-210ENST00000490699 ATF7IPQ6VMQ6 1270 aa13.89□□□□□ -0.19
VARS2-210ENST00000490699 DZIP3Q86Y13 1208 aaKnown RBP13.89□□□□□ -0.19
VARS2-210ENST00000490699 NBPF15Q8N660 670 aa13.89□□□□□ -0.19
VARS2-210ENST00000490699 SUPT16HQ9Y5B9 1047 aaKnown RBP13.89□□□□□ -0.19
VARS2-210ENST00000490699 NUP188Q5SRE5 1749 aa13.88□□□□□ -0.19
VARS2-210ENST00000490699 PHF14O94880 888 aa13.88□□□□□ -0.19
VARS2-210ENST00000490699 MYCNP04198 464 aaPredicted RBP13.88□□□□□ -0.19
VARS2-210ENST00000490699 FXR2P51116 673 aaKnown RBP eCLIP13.88□□□□□ -0.19
VARS2-210ENST00000490699 EIF5P55010 431 aaKnown RBP13.88□□□□□ -0.19
VARS2-210ENST00000490699 ANKRD13DQ6ZTN6 518 aa13.88□□□□□ -0.19
VARS2-210ENST00000490699 PROM2Q8N271 834 aa13.88□□□□□ -0.19
VARS2-210ENST00000490699 PLBD2Q8NHP8 589 aa13.88□□□□□ -0.19
VARS2-210ENST00000490699 CHMP4BQ9H444 224 aaKnown RBP13.88□□□□□ -0.19
VARS2-210ENST00000490699 PHAXQ9H814 394 aaKnown RBP13.88□□□□□ -0.19
VARS2-210ENST00000490699 SLC4A10Q6U841 1118 aa13.87□□□□□ -0.19
VARS2-210ENST00000490699 KSR2Q6VAB6 950 aa13.87□□□□□ -0.19
VARS2-210ENST00000490699 DZIP1LQ8IYY4 767 aaKnown RBP13.87□□□□□ -0.19
VARS2-210ENST00000490699 MYH14Q7Z406 1995 aaKnown RBP13.87□□□□□ -0.19
VARS2-210ENST00000490699 MAP3K15Q6ZN16 1313 aa13.87□□□□□ -0.19
VARS2-210ENST00000490699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.86□□□□□ -0.19
VARS2-210ENST00000490699 PI4KAP2A4QPH2 592 aa13.86□□□□□ -0.19
VARS2-210ENST00000490699 ERVV-1B6SEH8 477 aa13.86□□□□□ -0.19
VARS2-210ENST00000490699 ZBTB22O15209 634 aa13.86□□□□□ -0.19
VARS2-210ENST00000490699 CCT4P50991 539 aaKnown RBP13.86□□□□□ -0.19
VARS2-210ENST00000490699 PDE3AQ14432 1141 aa13.86□□□□□ -0.19
VARS2-210ENST00000490699 SLC15A2Q16348 729 aa13.86□□□□□ -0.19
VARS2-210ENST00000490699 G2E3Q7L622 706 aa13.86□□□□□ -0.19
VARS2-210ENST00000490699 PI4KAP1Q8N8J0 262 aa13.86□□□□□ -0.19
VARS2-210ENST00000490699 DNAAF4Q8WXU2 420 aa13.86□□□□□ -0.19
VARS2-210ENST00000490699 ZBTB3Q9H5J0 574 aa13.86□□□□□ -0.19
VARS2-210ENST00000490699 MAP3K2Q9Y2U5 619 aa13.86□□□□□ -0.19
VARS2-210ENST00000490699 PXDNLA1KZ92 1463 aa13.86□□□□□ -0.19
VARS2-210ENST00000490699 UBR3Q6ZT12 1888 aa13.85□□□□□ -0.19
VARS2-210ENST00000490699 RGL2O15211 777 aa13.85□□□□□ -0.19
VARS2-210ENST00000490699 TRIM27P14373 513 aa13.85□□□□□ -0.19
VARS2-210ENST00000490699 EVX2Q03828 476 aa13.85□□□□□ -0.19
VARS2-210ENST00000490699 TBC1D2BQ9UPU7 963 aa13.85□□□□□ -0.19
VARS2-210ENST00000490699 TTLL7Q6ZT98 887 aa13.84□□□□□ -0.19
VARS2-210ENST00000490699 CLUAP1Q96AJ1 413 aa13.84□□□□□ -0.19
VARS2-210ENST00000490699 NARFQ9UHQ1 456 aa13.84□□□□□ -0.19
VARS2-210ENST00000490699 ARFGEF2Q9Y6D5 1785 aa13.83□□□□□ -0.19
VARS2-210ENST00000490699 PITPNM1O00562 1244 aa13.83□□□□□ -0.2
VARS2-210ENST00000490699 PLIN1O60240 522 aa13.83□□□□□ -0.2
VARS2-210ENST00000490699 ZNF827Q17R98 1081 aa13.83□□□□□ -0.2
VARS2-210ENST00000490699 CLEC4GQ6UXB4 293 aa13.83□□□□□ -0.2
VARS2-210ENST00000490699 LRP10Q7Z4F1 713 aa13.83□□□□□ -0.2
VARS2-210ENST00000490699 ITPRIPQ8IWB1 547 aa13.83□□□□□ -0.2
VARS2-210ENST00000490699 ARHGEF1Q92888 912 aaKnown RBP13.83□□□□□ -0.2
VARS2-210ENST00000490699 METTL22Q9BUU2 404 aaPredicted RBP13.83□□□□□ -0.2
VARS2-210ENST00000490699 SRCIN1Q9C0H9 1055 aa13.83□□□□□ -0.2
VARS2-210ENST00000490699 HDAC5Q9UQL6 1122 aa13.83□□□□□ -0.2
VARS2-210ENST00000490699 QSER1Q2KHR3 1735 aa13.83□□□□□ -0.2
VARS2-210ENST00000490699 SCN7AQ01118 1682 aa13.82□□□□□ -0.2
VARS2-210ENST00000490699 C4AP0C0L4 1744 aa13.82□□□□□ -0.2
VARS2-210ENST00000490699 BCORQ6W2J9 1755 aa13.82□□□□□ -0.2
VARS2-210ENST00000490699 F6X3S4 739 aa13.82□□□□□ -0.2
VARS2-210ENST00000490699 NPHP1O15259 732 aa13.82□□□□□ -0.2
VARS2-210ENST00000490699 GIGYF2Q6Y7W6 1299 aaKnown RBP13.82□□□□□ -0.2
VARS2-210ENST00000490699 LINS1Q8NG48 757 aa13.82□□□□□ -0.2
VARS2-210ENST00000490699 MYD88Q99836 296 aa13.82□□□□□ -0.2
VARS2-210ENST00000490699 ABCC4O15439 1325 aa13.82□□□□□ -0.2
VARS2-210ENST00000490699 USP42Q9H9J4 1324 aaKnown RBP13.82□□□□□ -0.2
VARS2-210ENST00000490699 ADCY9O60503 1353 aa13.82□□□□□ -0.2
VARS2-210ENST00000490699 ALDH1L1O75891 902 aa13.81□□□□□ -0.2
VARS2-210ENST00000490699 PARP10Q53GL7 1025 aa13.81□□□□□ -0.2
VARS2-210ENST00000490699 USPL1Q5W0Q7 1092 aa13.81□□□□□ -0.2
VARS2-210ENST00000490699 DDX19BQ9UMR2 479 aa13.81□□□□□ -0.2
VARS2-210ENST00000490699 RNF123Q5XPI4 1314 aa13.81□□□□□ -0.2
VARS2-210ENST00000490699 ATP10DQ9P241 1426 aa13.81□□□□□ -0.2
VARS2-210ENST00000490699 CAMTA2O94983 1202 aa13.8□□□□□ -0.2
VARS2-210ENST00000490699 HSP90B1P14625 803 aaKnown RBP13.8□□□□□ -0.2
VARS2-210ENST00000490699 TCIRG1Q13488 830 aa13.8□□□□□ -0.2
VARS2-210ENST00000490699 NLGN1Q8N2Q7 840 aa13.8□□□□□ -0.2
VARS2-210ENST00000490699 ANO8Q9HCE9 1232 aaPredicted RBP13.8□□□□□ -0.2
VARS2-210ENST00000490699 CWC25Q9NXE8 425 aaPredicted RBP13.8□□□□□ -0.2
VARS2-210ENST00000490699 C9orf78Q9NZ63 289 aaPredicted RBP13.8□□□□□ -0.2
VARS2-210ENST00000490699 ANKRD36CQ5JPF3 1778 aa13.8□□□□□ -0.2
VARS2-210ENST00000490699 TUBGCP6Q96RT7 1819 aa13.8□□□□□ -0.2
VARS2-210ENST00000490699 N4BP2Q86UW6 1770 aaPredicted RBP13.79□□□□□ -0.2
VARS2-210ENST00000490699 NUP98P52948 1817 aa13.79□□□□□ -0.2
VARS2-210ENST00000490699 AFDNP55196 1824 aaKnown RBP13.79□□□□□ -0.2
VARS2-210ENST00000490699 MVPQ14764 893 aaKnown RBP13.79□□□□□ -0.2
VARS2-210ENST00000490699 INTS3Q68E01 1043 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms