RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 U3KPZ7 1027 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF39-205ENST00000490638 MPHOSPH10O00566 681 aaKnown RBP17.1■□□□□ 0.33
ARHGEF39-205ENST00000490638 GCC2Q8IWJ2 1684 aa17.09■□□□□ 0.33
ARHGEF39-205ENST00000490638 CCDC73Q6ZRK6 1079 aa17.09■□□□□ 0.33
ARHGEF39-205ENST00000490638 RHPN1Q8TCX5 695 aa17.09■□□□□ 0.33
ARHGEF39-205ENST00000490638 MSNP26038 577 aaKnown RBP17.08■□□□□ 0.33
ARHGEF39-205ENST00000490638 TTLL12Q14166 644 aaPredicted RBP17.08■□□□□ 0.33
ARHGEF39-205ENST00000490638 GOLGA6L19H0YKK7 550 aa17.08■□□□□ 0.32
ARHGEF39-205ENST00000490638 FAM89AQ96GI7 184 aa17.08■□□□□ 0.32
ARHGEF39-205ENST00000490638 CHL1O00533 1208 aa17.08■□□□□ 0.32
ARHGEF39-205ENST00000490638 PLA2R1Q13018 1463 aa17.07■□□□□ 0.32
ARHGEF39-205ENST00000490638 ANO8Q9HCE9 1232 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF39-205ENST00000490638 BABAM1Q9NWV8 329 aa17.07■□□□□ 0.32
ARHGEF39-205ENST00000490638 CNBD1Q8NA66 436 aa17.07■□□□□ 0.32
ARHGEF39-205ENST00000490638 HELBQ8NG08 1087 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF39-205ENST00000490638 HOOK1Q9UJC3 728 aaKnown RBP17.07■□□□□ 0.32
ARHGEF39-205ENST00000490638 CDC42BPAQ5VT25 1732 aa17.07■□□□□ 0.32
ARHGEF39-205ENST00000490638 GOLGA6L3A6NEY3 463 aa17.07■□□□□ 0.32
ARHGEF39-205ENST00000490638 IL15P40933 162 aaPredicted RBP17.07■□□□□ 0.32
ARHGEF39-205ENST00000490638 SOGA3Q5TF21 947 aa17.06■□□□□ 0.32
ARHGEF39-205ENST00000490638 SH3TC1Q8TE82 1336 aa17.06■□□□□ 0.32
ARHGEF39-205ENST00000490638 CCDC87Q9NVE4 849 aa17.06■□□□□ 0.32
ARHGEF39-205ENST00000490638 INSRP06213 1382 aa17.06■□□□□ 0.32
ARHGEF39-205ENST00000490638 ERVV-2B6SEH9 535 aa17.06■□□□□ 0.32
ARHGEF39-205ENST00000490638 CARD10Q9BWT7 1032 aa17.06■□□□□ 0.32
ARHGEF39-205ENST00000490638 BAG3O95817 575 aa17.06■□□□□ 0.32
ARHGEF39-205ENST00000490638 UQCRFS1P1P0C7P4 283 aa17.06■□□□□ 0.32
ARHGEF39-205ENST00000490638 A2ML1A8K2U0 1454 aa17.05■□□□□ 0.32
ARHGEF39-205ENST00000490638 TSHZ3Q63HK5 1081 aa17.05■□□□□ 0.32
ARHGEF39-205ENST00000490638 ZNF444Q8N0Y2 327 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF39-205ENST00000490638 UPF3BQ9BZI7 483 aaKnown RBP17.05■□□□□ 0.32
ARHGEF39-205ENST00000490638 RANBP6O60518 1105 aaKnown RBP17.05■□□□□ 0.32
ARHGEF39-205ENST00000490638 PHKG2P15735 406 aa17.05■□□□□ 0.32
ARHGEF39-205ENST00000490638 TTF1Q15361 905 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF39-205ENST00000490638 SKOR2Q2VWA4 1001 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF39-205ENST00000490638 SPTY2D1Q68D10 685 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF39-205ENST00000490638 G2E3Q7L622 706 aa17.05■□□□□ 0.32
ARHGEF39-205ENST00000490638 SKAP1Q86WV1 359 aa17.05■□□□□ 0.32
ARHGEF39-205ENST00000490638 OGFOD1Q8N543 542 aa17.05■□□□□ 0.32
ARHGEF39-205ENST00000490638 PIBF1Q8WXW3 757 aa17.05■□□□□ 0.32
ARHGEF39-205ENST00000490638 PA2G4Q9UQ80 394 aaKnown RBP17.05■□□□□ 0.32
ARHGEF39-205ENST00000490638 HOXB7P09629 217 aa17.05■□□□□ 0.32
ARHGEF39-205ENST00000490638 SOS1Q07889 1333 aaPredicted RBP17.04■□□□□ 0.32
ARHGEF39-205ENST00000490638 PRPF40BQ6NWY9 871 aaKnown RBP17.04■□□□□ 0.32
ARHGEF39-205ENST00000490638 ANKRD44Q8N8A2 993 aa17.04■□□□□ 0.32
ARHGEF39-205ENST00000490638 ZNF772Q68DY9 489 aaPredicted RBP17.04■□□□□ 0.32
ARHGEF39-205ENST00000490638 PAXIP1Q6ZW49 1069 aaPredicted RBP17.04■□□□□ 0.32
ARHGEF39-205ENST00000490638 SDF4Q9BRK5 362 aa17.04■□□□□ 0.32
ARHGEF39-205ENST00000490638 PDRG1Q9NUG6 133 aa17.04■□□□□ 0.32
ARHGEF39-205ENST00000490638 FAM182BQ5T319 152 aa17.04■□□□□ 0.32
ARHGEF39-205ENST00000490638 FAM135BQ49AJ0 1406 aa17.04■□□□□ 0.32
ARHGEF39-205ENST00000490638 HCLS1P14317 486 aaPredicted RBP17.04■□□□□ 0.32
ARHGEF39-205ENST00000490638 ATP8B2P98198 1209 aa17.04■□□□□ 0.32
ARHGEF39-205ENST00000490638 PARP10Q53GL7 1025 aa17.04■□□□□ 0.32
ARHGEF39-205ENST00000490638 EVI5LQ96CN4 794 aa17.04■□□□□ 0.32
ARHGEF39-205ENST00000490638 BACH2Q9BYV9 841 aa17.04■□□□□ 0.32
ARHGEF39-205ENST00000490638 MYOM2P54296 1465 aa17.03■□□□□ 0.32
ARHGEF39-205ENST00000490638 RXRBP28702 533 aa17.03■□□□□ 0.32
ARHGEF39-205ENST00000490638 PLBD2Q8NHP8 589 aa17.03■□□□□ 0.32
ARHGEF39-205ENST00000490638 TRIM35Q9UPQ4 493 aa17.03■□□□□ 0.32
ARHGEF39-205ENST00000490638 ZNF213O14771 459 aa17.03■□□□□ 0.32
ARHGEF39-205ENST00000490638 IL17REQ8NFR9 667 aa17.03■□□□□ 0.32
ARHGEF39-205ENST00000490638 JDP2Q8WYK2 163 aa17.03■□□□□ 0.32
ARHGEF39-205ENST00000490638 F8W031 263 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF39-205ENST00000490638 IQCA1Q86XH1 822 aa17.02■□□□□ 0.32
ARHGEF39-205ENST00000490638 TNNQ9UQP3 1299 aa17.02■□□□□ 0.32
ARHGEF39-205ENST00000490638 WDHD1O75717 1129 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF39-205ENST00000490638 PCDHB15Q9Y5E8 787 aa17.02■□□□□ 0.31
ARHGEF39-205ENST00000490638 CASTP20810 708 aaKnown RBP17.02■□□□□ 0.31
ARHGEF39-205ENST00000490638 USP6P35125 1406 aa17.01■□□□□ 0.31
ARHGEF39-205ENST00000490638 ABCA9Q8IUA7 1624 aa17.01■□□□□ 0.31
ARHGEF39-205ENST00000490638 CCDC24Q8N4L8 307 aa17.01■□□□□ 0.31
ARHGEF39-205ENST00000490638 CEBPZQ03701 1054 aaKnown RBP17.01■□□□□ 0.31
ARHGEF39-205ENST00000490638 WDR17Q8IZU2 1322 aa17.01■□□□□ 0.31
ARHGEF39-205ENST00000490638 MYO1BO43795 1136 aa17■□□□□ 0.31
ARHGEF39-205ENST00000490638 CDKL5O76039 1030 aa17■□□□□ 0.31
ARHGEF39-205ENST00000490638 TPM2P07951 284 aa17■□□□□ 0.31
ARHGEF39-205ENST00000490638 TSR1Q2NL82 804 aaKnown RBP17■□□□□ 0.31
ARHGEF39-205ENST00000490638 USP16Q9Y5T5 823 aa17■□□□□ 0.31
ARHGEF39-205ENST00000490638 MAP3K4Q9Y6R4 1608 aa17■□□□□ 0.31
ARHGEF39-205ENST00000490638 STK38Q15208 465 aa17■□□□□ 0.31
ARHGEF39-205ENST00000490638 LARP1BQ659C4 914 aaKnown RBP17■□□□□ 0.31
ARHGEF39-205ENST00000490638 RNF41Q9H4P4 317 aaPredicted RBP17■□□□□ 0.31
ARHGEF39-205ENST00000490638 EIF4A1P60842 406 aaKnown RBP17■□□□□ 0.31
ARHGEF39-205ENST00000490638 ERBB3P21860 1342 aa16.99■□□□□ 0.31
ARHGEF39-205ENST00000490638 SPATA31A3Q5VYP0 1347 aa16.99■□□□□ 0.31
ARHGEF39-205ENST00000490638 ANKRD20A12PQ8NF67 263 aa16.99■□□□□ 0.31
ARHGEF39-205ENST00000490638 METTL22Q9BUU2 404 aaPredicted RBP16.99■□□□□ 0.31
ARHGEF39-205ENST00000490638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.99■□□□□ 0.31
ARHGEF39-205ENST00000490638 CCDC191Q8NCU4 936 aa16.99■□□□□ 0.31
ARHGEF39-205ENST00000490638 RLBP1P12271 317 aa16.99■□□□□ 0.31
ARHGEF39-205ENST00000490638 RIMBP2O15034 1052 aa16.98■□□□□ 0.31
ARHGEF39-205ENST00000490638 KCNQ3O43525 872 aa16.98■□□□□ 0.31
ARHGEF39-205ENST00000490638 FEZ1Q99689 392 aa16.98■□□□□ 0.31
ARHGEF39-205ENST00000490638 PLXNC1O60486 1568 aa16.98■□□□□ 0.31
ARHGEF39-205ENST00000490638 KDM5CP41229 1560 aa16.98■□□□□ 0.31
ARHGEF39-205ENST00000490638 TRIM37O94972 964 aa16.98■□□□□ 0.31
ARHGEF39-205ENST00000490638 IGHDP01880 384 aa16.98■□□□□ 0.31
ARHGEF39-205ENST00000490638 CCDC82Q8N4S0 544 aa16.98■□□□□ 0.31
ARHGEF39-205ENST00000490638 CDK5RAP3Q96JB5 506 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms