RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 EXOSC9Q06265 439 aaKnown RBP22.05■■□□□ 1.12
RAPGEF3-212ENST00000490387 NFIXQ14938 502 aa22.05■■□□□ 1.12
RAPGEF3-212ENST00000490387 NPM2Q86SE8 214 aaKnown RBP22.04■■□□□ 1.12
RAPGEF3-212ENST00000490387 BCL2L12Q9HB09 334 aa22.04■■□□□ 1.12
RAPGEF3-212ENST00000490387 SCN7AQ01118 1682 aa22.04■■□□□ 1.12
RAPGEF3-212ENST00000490387 ATP10DQ9P241 1426 aa22.03■■□□□ 1.12
RAPGEF3-212ENST00000490387 ARFGEF1Q9Y6D6 1849 aa22.03■■□□□ 1.12
RAPGEF3-212ENST00000490387 NRXN2Q9P2S2 1712 aa22.03■■□□□ 1.12
RAPGEF3-212ENST00000490387 A1BGP04217 495 aa22.02■■□□□ 1.12
RAPGEF3-212ENST00000490387 IL6STP40189 918 aaPredicted RBP22.02■■□□□ 1.12
RAPGEF3-212ENST00000490387 TWISTNBQ3B726 338 aaPredicted RBP22.02■■□□□ 1.12
RAPGEF3-212ENST00000490387 ELL2O00472 640 aaPredicted RBP22.01■■□□□ 1.11
RAPGEF3-212ENST00000490387 VAMP4O75379 141 aa22.01■■□□□ 1.11
RAPGEF3-212ENST00000490387 PIM2Q9P1W9 311 aa22.01■■□□□ 1.11
RAPGEF3-212ENST00000490387 ADCY9O60503 1353 aa22■■□□□ 1.11
RAPGEF3-212ENST00000490387 SERPINB2P05120 415 aa22■■□□□ 1.11
RAPGEF3-212ENST00000490387 KCNA3P22001 575 aa22■■□□□ 1.11
RAPGEF3-212ENST00000490387 BICDL1Q6ZP65 573 aa22■■□□□ 1.11
RAPGEF3-212ENST00000490387 TBC1D2BQ9UPU7 963 aa22■■□□□ 1.11
RAPGEF3-212ENST00000490387 ERBB4Q15303 1308 aa22■■□□□ 1.11
RAPGEF3-212ENST00000490387 NBPF26B4DH59 902 aa21.99■■□□□ 1.11
RAPGEF3-212ENST00000490387 CHRNA5P30532 468 aa21.99■■□□□ 1.11
RAPGEF3-212ENST00000490387 NBPF10Q6P3W6 841 aaKnown RBP21.99■■□□□ 1.11
RAPGEF3-212ENST00000490387 NBPF15Q8N660 670 aa21.99■■□□□ 1.11
RAPGEF3-212ENST00000490387 CACNA1FO60840 1977 aa21.98■■□□□ 1.11
RAPGEF3-212ENST00000490387 BCORQ6W2J9 1755 aa21.98■■□□□ 1.11
RAPGEF3-212ENST00000490387 PDIA6Q15084 440 aa21.98■■□□□ 1.11
RAPGEF3-212ENST00000490387 HDGFL1Q5TGJ6 251 aa21.98■■□□□ 1.11
RAPGEF3-212ENST00000490387 ARHGAP27Q6ZUM4 889 aa21.98■■□□□ 1.11
RAPGEF3-212ENST00000490387 EIF2S2P20042 333 aaKnown RBP21.97■■□□□ 1.11
RAPGEF3-212ENST00000490387 DALRD3Q5D0E6 543 aaKnown RBP21.97■■□□□ 1.11
RAPGEF3-212ENST00000490387 LRP10Q7Z4F1 713 aa21.97■■□□□ 1.11
RAPGEF3-212ENST00000490387 CT47B1P0C2W7 299 aaPredicted RBP21.96■■□□□ 1.11
RAPGEF3-212ENST00000490387 PIP4K2AP48426 406 aaPredicted RBP21.96■■□□□ 1.11
RAPGEF3-212ENST00000490387 C1QTNF8P60827 252 aa21.96■■□□□ 1.11
RAPGEF3-212ENST00000490387 TBC1D9BQ66K14 1250 aa21.96■■□□□ 1.11
RAPGEF3-212ENST00000490387 DZIP3Q86Y13 1208 aaKnown RBP21.96■■□□□ 1.11
RAPGEF3-212ENST00000490387 GPBP1L1Q9HC44 474 aaPredicted RBP21.96■■□□□ 1.11
RAPGEF3-212ENST00000490387 DLEC1Q9Y238 1755 aa21.95■■□□□ 1.1
RAPGEF3-212ENST00000490387 PROSER3Q2NL68 480 aa21.95■■□□□ 1.1
RAPGEF3-212ENST00000490387 ZNF526Q8TF50 670 aaPredicted RBP21.95■■□□□ 1.1
RAPGEF3-212ENST00000490387 NECTIN2Q92692 538 aa21.95■■□□□ 1.1
RAPGEF3-212ENST00000490387 CAMTA2O94983 1202 aa21.94■■□□□ 1.1
RAPGEF3-212ENST00000490387 CHMP4AQ9BY43 222 aa21.94■■□□□ 1.1
RAPGEF3-212ENST00000490387 DDX21Q9NR30 783 aaKnown RBP eCLIP21.94■■□□□ 1.1
RAPGEF3-212ENST00000490387 CHPF2Q9P2E5 772 aa21.94■■□□□ 1.1
RAPGEF3-212ENST00000490387 CARMIL3Q8ND23 1372 aa21.94■■□□□ 1.1
RAPGEF3-212ENST00000490387 CCDC30Q5VVM6 783 aa21.93■■□□□ 1.1
RAPGEF3-212ENST00000490387 ZNF428Q96B54 188 aa21.93■■□□□ 1.1
RAPGEF3-212ENST00000490387 DBF4Q9UBU7 674 aaPredicted RBP21.93■■□□□ 1.1
RAPGEF3-212ENST00000490387 ANKRD31Q8N7Z5 1873 aa21.92■■□□□ 1.1
RAPGEF3-212ENST00000490387 NPHP1O15259 732 aa21.91■■□□□ 1.1
RAPGEF3-212ENST00000490387 ANXA1P04083 346 aa21.91■■□□□ 1.1
RAPGEF3-212ENST00000490387 SETDB2Q96T68 719 aa21.91■■□□□ 1.1
RAPGEF3-212ENST00000490387 C2CD5Q86YS7 1000 aa21.9■■□□□ 1.1
RAPGEF3-212ENST00000490387 H0YIN7 160 aa21.89■■□□□ 1.09
RAPGEF3-212ENST00000490387 MYL6BP14649 208 aa21.89■■□□□ 1.09
RAPGEF3-212ENST00000490387 ZNF652Q9Y2D9 606 aa21.89■■□□□ 1.09
RAPGEF3-212ENST00000490387 TCERG1O14776 1098 aaKnown RBP21.88■■□□□ 1.09
RAPGEF3-212ENST00000490387 PRR5LQ6MZQ0 368 aa21.88■■□□□ 1.09
RAPGEF3-212ENST00000490387 CNBD1Q8NA66 436 aa21.88■■□□□ 1.09
RAPGEF3-212ENST00000490387 HYPKQ9NX55 129 aa21.88■■□□□ 1.09
RAPGEF3-212ENST00000490387 PDE6BP35913 854 aa21.87■■□□□ 1.09
RAPGEF3-212ENST00000490387 ALDH1L2Q3SY69 923 aa21.87■■□□□ 1.09
RAPGEF3-212ENST00000490387 CLEC4GQ6UXB4 293 aa21.87■■□□□ 1.09
RAPGEF3-212ENST00000490387 CCDC24Q8N4L8 307 aa21.87■■□□□ 1.09
RAPGEF3-212ENST00000490387 TTLL6Q8N841 843 aa21.87■■□□□ 1.09
RAPGEF3-212ENST00000490387 SSH1Q8WYL5 1049 aa21.87■■□□□ 1.09
RAPGEF3-212ENST00000490387 BRIP1Q9BX63 1249 aa21.87■■□□□ 1.09
RAPGEF3-212ENST00000490387 STK31Q9BXU1 1019 aa21.87■■□□□ 1.09
RAPGEF3-212ENST00000490387 COL11A2P13942 1736 aaPredicted RBP21.86■■□□□ 1.09
RAPGEF3-212ENST00000490387 SBF1O95248 1867 aa21.86■■□□□ 1.09
RAPGEF3-212ENST00000490387 RARSP54136 660 aaKnown RBP21.86■■□□□ 1.09
RAPGEF3-212ENST00000490387 ST5P78524 1137 aa21.86■■□□□ 1.09
RAPGEF3-212ENST00000490387 C9orf131Q5VYM1 1079 aa21.86■■□□□ 1.09
RAPGEF3-212ENST00000490387 PDZRN3Q9UPQ7 1066 aa21.86■■□□□ 1.09
RAPGEF3-212ENST00000490387 SLC4A2P04920 1241 aa21.85■■□□□ 1.09
RAPGEF3-212ENST00000490387 TTLL7Q6ZT98 887 aa21.85■■□□□ 1.09
RAPGEF3-212ENST00000490387 PHAXQ9H814 394 aaKnown RBP21.85■■□□□ 1.09
RAPGEF3-212ENST00000490387 BRPF1P55201 1214 aaPredicted RBP21.84■■□□□ 1.09
RAPGEF3-212ENST00000490387 COPS6Q7L5N1 327 aa21.84■■□□□ 1.09
RAPGEF3-212ENST00000490387 G2E3Q7L622 706 aa21.84■■□□□ 1.09
RAPGEF3-212ENST00000490387 MRPL50Q8N5N7 158 aaKnown RBP21.84■■□□□ 1.09
RAPGEF3-212ENST00000490387 XAGE3Q8WTP9 111 aa21.84■■□□□ 1.09
RAPGEF3-212ENST00000490387 ZNF622Q969S3 477 aaKnown RBP eCLIP21.84■■□□□ 1.09
RAPGEF3-212ENST00000490387 CACNA1SQ13698 1873 aa21.83■■□□□ 1.09
RAPGEF3-212ENST00000490387 NUP98P52948 1817 aa21.83■■□□□ 1.09
RAPGEF3-212ENST00000490387 NBPF5PQ86XG9 351 aaPredicted RBP21.83■■□□□ 1.09
RAPGEF3-212ENST00000490387 RNF181Q9P0P0 153 aa21.83■■□□□ 1.09
RAPGEF3-212ENST00000490387 ARFGEF2Q9Y6D5 1785 aa21.83■■□□□ 1.09
RAPGEF3-212ENST00000490387 RGL2O15211 777 aa21.82■■□□□ 1.08
RAPGEF3-212ENST00000490387 NIP7Q9Y221 180 aaKnown RBP eCLIP21.82■■□□□ 1.08
RAPGEF3-212ENST00000490387 RASSF7Q02833 373 aa21.81■■□□□ 1.08
RAPGEF3-212ENST00000490387 FLIIQ13045 1269 aa21.81■■□□□ 1.08
RAPGEF3-212ENST00000490387 BCL2L13Q9BXK5 485 aa21.81■■□□□ 1.08
RAPGEF3-212ENST00000490387 MAP3K15Q6ZN16 1313 aa21.8■■□□□ 1.08
RAPGEF3-212ENST00000490387 CCDC88AQ3V6T2 1871 aa21.8■■□□□ 1.08
RAPGEF3-212ENST00000490387 ERVV-1B6SEH8 477 aa21.8■■□□□ 1.08
RAPGEF3-212ENST00000490387 SMC4Q9NTJ3 1288 aa21.8■■□□□ 1.08
RAPGEF3-212ENST00000490387 ANKRD36CQ5JPF3 1778 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms