RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 BCORQ6W2J9 1755 aa22.8■■□□□ 1.24
SEC13-218ENST00000490283 ANP32CO43423 234 aa22.79■■□□□ 1.24
SEC13-218ENST00000490283 TTLL6Q8N841 843 aa22.79■■□□□ 1.24
SEC13-218ENST00000490283 TRIM35Q9UPQ4 493 aa22.79■■□□□ 1.24
SEC13-218ENST00000490283 ADCY9O60503 1353 aa22.78■■□□□ 1.24
SEC13-218ENST00000490283 EIF2S2P20042 333 aaKnown RBP22.78■■□□□ 1.24
SEC13-218ENST00000490283 GPBP1L1Q9HC44 474 aaPredicted RBP22.78■■□□□ 1.24
SEC13-218ENST00000490283 BRCA1P38398 1863 aaKnown RBP22.77■■□□□ 1.24
SEC13-218ENST00000490283 ERVV-1B6SEH8 477 aa22.77■■□□□ 1.24
SEC13-218ENST00000490283 TPTE2Q6XPS3 522 aa22.77■■□□□ 1.24
SEC13-218ENST00000490283 ZNF622Q969S3 477 aaKnown RBP eCLIP22.77■■□□□ 1.24
SEC13-218ENST00000490283 CHL1O00533 1208 aa22.76■■□□□ 1.23
SEC13-218ENST00000490283 CALD1Q05682 793 aaKnown RBP22.76■■□□□ 1.23
SEC13-218ENST00000490283 CCDC24Q8N4L8 307 aa22.76■■□□□ 1.23
SEC13-218ENST00000490283 MAP3K15Q6ZN16 1313 aa22.76■■□□□ 1.23
SEC13-218ENST00000490283 APAF1O14727 1248 aa22.75■■□□□ 1.23
SEC13-218ENST00000490283 GTF2E1P29083 439 aaPredicted RBP22.75■■□□□ 1.23
SEC13-218ENST00000490283 ZNF526Q8TF50 670 aaPredicted RBP22.75■■□□□ 1.23
SEC13-218ENST00000490283 ARFGEF1Q9Y6D6 1849 aa22.74■■□□□ 1.23
SEC13-218ENST00000490283 HLFQ16534 295 aa22.74■■□□□ 1.23
SEC13-218ENST00000490283 NYXQ9GZU5 481 aa22.73■■□□□ 1.23
SEC13-218ENST00000490283 ZBTB3Q9H5J0 574 aa22.73■■□□□ 1.23
SEC13-218ENST00000490283 FAM177BA6PVY3 158 aa22.72■■□□□ 1.23
SEC13-218ENST00000490283 C9orf131Q5VYM1 1079 aa22.72■■□□□ 1.23
SEC13-218ENST00000490283 TTLL7Q6ZT98 887 aa22.72■■□□□ 1.23
SEC13-218ENST00000490283 CNKSR1Q969H4 720 aa22.72■■□□□ 1.23
SEC13-218ENST00000490283 CFAP44Q96MT7 982 aa22.72■■□□□ 1.23
SEC13-218ENST00000490283 C1QTNF8P60827 252 aa22.7■■□□□ 1.22
SEC13-218ENST00000490283 STYK1Q6J9G0 422 aa22.7■■□□□ 1.22
SEC13-218ENST00000490283 NECTIN2Q92692 538 aa22.7■■□□□ 1.22
SEC13-218ENST00000490283 MASTLQ96GX5 879 aa22.7■■□□□ 1.22
SEC13-218ENST00000490283 MRS2Q9HD23 443 aa22.7■■□□□ 1.22
SEC13-218ENST00000490283 RNF181Q9P0P0 153 aa22.7■■□□□ 1.22
SEC13-218ENST00000490283 DLEC1Q9Y238 1755 aa22.7■■□□□ 1.22
SEC13-218ENST00000490283 HOXB7P09629 217 aa22.69■■□□□ 1.22
SEC13-218ENST00000490283 SRGNP10124 158 aa22.68■■□□□ 1.22
SEC13-218ENST00000490283 GNAI1P63096 354 aa22.68■■□□□ 1.22
SEC13-218ENST00000490283 PDIA6Q15084 440 aa22.68■■□□□ 1.22
SEC13-218ENST00000490283 HDGFL1Q5TGJ6 251 aa22.68■■□□□ 1.22
SEC13-218ENST00000490283 GIGYF2Q6Y7W6 1299 aaKnown RBP22.68■■□□□ 1.22
SEC13-218ENST00000490283 IFT57Q9NWB7 429 aa22.68■■□□□ 1.22
SEC13-218ENST00000490283 ANKRD31Q8N7Z5 1873 aa22.67■■□□□ 1.22
SEC13-218ENST00000490283 GPTP24298 496 aa22.67■■□□□ 1.22
SEC13-218ENST00000490283 KRT24Q2M2I5 525 aa22.67■■□□□ 1.22
SEC13-218ENST00000490283 ZNF219Q9P2Y4 722 aaPredicted RBP22.67■■□□□ 1.22
SEC13-218ENST00000490283 ANXA1P04083 346 aa22.66■■□□□ 1.22
SEC13-218ENST00000490283 NPR1P16066 1061 aa22.66■■□□□ 1.22
SEC13-218ENST00000490283 RASSF7Q02833 373 aa22.66■■□□□ 1.22
SEC13-218ENST00000490283 CCDC184Q52MB2 194 aa22.66■■□□□ 1.22
SEC13-218ENST00000490283 SOGA3Q5TF21 947 aa22.66■■□□□ 1.22
SEC13-218ENST00000490283 DDX21Q9NR30 783 aaKnown RBP eCLIP22.66■■□□□ 1.22
SEC13-218ENST00000490283 MBIPQ9NS73 344 aa22.66■■□□□ 1.22
SEC13-218ENST00000490283 C21orf2O43822 256 aa22.65■■□□□ 1.22
SEC13-218ENST00000490283 LMNB1P20700 586 aa22.65■■□□□ 1.22
SEC13-218ENST00000490283 AIMP1Q12904 312 aaKnown RBP22.65■■□□□ 1.22
SEC13-218ENST00000490283 PROSER3Q2NL68 480 aa22.65■■□□□ 1.22
SEC13-218ENST00000490283 PARP10Q53GL7 1025 aa22.65■■□□□ 1.22
SEC13-218ENST00000490283 PPP1R42Q7Z4L9 355 aa22.65■■□□□ 1.22
SEC13-218ENST00000490283 IBTKQ9P2D0 1353 aaPredicted RBP22.64■■□□□ 1.22
SEC13-218ENST00000490283 HSP90AB3PQ58FF7 597 aa22.64■■□□□ 1.21
SEC13-218ENST00000490283 DUSP27Q5VZP5 1158 aa22.64■■□□□ 1.21
SEC13-218ENST00000490283 PRPF40BQ6NWY9 871 aaKnown RBP22.64■■□□□ 1.21
SEC13-218ENST00000490283 COPS6Q7L5N1 327 aa22.64■■□□□ 1.21
SEC13-218ENST00000490283 LRP10Q7Z4F1 713 aa22.64■■□□□ 1.21
SEC13-218ENST00000490283 XAGE3Q8WTP9 111 aa22.64■■□□□ 1.21
SEC13-218ENST00000490283 COL11A2P13942 1736 aaPredicted RBP22.63■■□□□ 1.21
SEC13-218ENST00000490283 ZNF853P0CG23 659 aa22.63■■□□□ 1.21
SEC13-218ENST00000490283 ZNF34Q8IZ26 560 aa22.63■■□□□ 1.21
SEC13-218ENST00000490283 CHPF2Q9P2E5 772 aa22.63■■□□□ 1.21
SEC13-218ENST00000490283 DBF4Q9UBU7 674 aaPredicted RBP22.63■■□□□ 1.21
SEC13-218ENST00000490283 UBN2Q6ZU65 1347 aa22.62■■□□□ 1.21
SEC13-218ENST00000490283 KDM2BQ8NHM5 1336 aa22.62■■□□□ 1.21
SEC13-218ENST00000490283 ZC3H4Q9UPT8 1303 aaKnown RBP22.62■■□□□ 1.21
SEC13-218ENST00000490283 KLRG2A4D1S0 409 aaPredicted RBP22.62■■□□□ 1.21
SEC13-218ENST00000490283 NUTM1Q86Y26 1132 aa22.62■■□□□ 1.21
SEC13-218ENST00000490283 CHMP4AQ9BY43 222 aa22.62■■□□□ 1.21
SEC13-218ENST00000490283 ALDH1B1P30837 517 aa22.61■■□□□ 1.21
SEC13-218ENST00000490283 ERFEQ4G0M1 354 aa22.61■■□□□ 1.21
SEC13-218ENST00000490283 NFKBIEO00221 500 aa22.6■■□□□ 1.21
SEC13-218ENST00000490283 SUSD4Q5VX71 490 aa22.6■■□□□ 1.21
SEC13-218ENST00000490283 RPGRQ92834 1020 aaKnown RBP22.6■■□□□ 1.21
SEC13-218ENST00000490283 HYPKQ9NX55 129 aa22.6■■□□□ 1.21
SEC13-218ENST00000490283 NUP98P52948 1817 aa22.59■■□□□ 1.21
SEC13-218ENST00000490283 SENP3-EIF4A1A0A087X0R7 540 aa22.59■■□□□ 1.21
SEC13-218ENST00000490283 CCDC27Q2M243 656 aa22.59■■□□□ 1.21
SEC13-218ENST00000490283 UTP14AQ9BVJ6 771 aaKnown RBP22.59■■□□□ 1.21
SEC13-218ENST00000490283 TAOK3Q9H2K8 898 aa22.59■■□□□ 1.21
SEC13-218ENST00000490283 ABCC12Q96J65 1359 aa22.59■■□□□ 1.21
SEC13-218ENST00000490283 NTSR2O95665 410 aa22.58■■□□□ 1.21
SEC13-218ENST00000490283 CCDC93Q567U6 631 aa22.58■■□□□ 1.21
SEC13-218ENST00000490283 RNF123Q5XPI4 1314 aa22.57■■□□□ 1.2
SEC13-218ENST00000490283 LTBP3Q9NS15 1303 aa22.57■■□□□ 1.2
SEC13-218ENST00000490283 RIC1Q4ADV7 1423 aa22.57■■□□□ 1.2
SEC13-218ENST00000490283 C16orf71Q8IYS4 520 aaPredicted RBP22.57■■□□□ 1.2
SEC13-218ENST00000490283 ELL2O00472 640 aaPredicted RBP22.56■■□□□ 1.2
SEC13-218ENST00000490283 KIF3CO14782 793 aa22.56■■□□□ 1.2
SEC13-218ENST00000490283 TCIRG1Q13488 830 aa22.56■■□□□ 1.2
SEC13-218ENST00000490283 CRY2Q49AN0 593 aa22.56■■□□□ 1.2
SEC13-218ENST00000490283 PLBD2Q8NHP8 589 aa22.56■■□□□ 1.2
SEC13-218ENST00000490283 NCBP3Q53F19 620 aaKnown RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms