RNA–Protein interactions for RNA: ENST00000489836.1

AC055748.1-201, humanhuman

BASIC

Gene AC055748.1, Length 959 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055748.1-201ENST00000489836 TMF1P82094 1093 aa13.94□□□□□ -0.18
AC055748.1-201ENST00000489836 VPS72Q15906 364 aa13.94□□□□□ -0.18
AC055748.1-201ENST00000489836 CCDC24Q8N4L8 307 aa13.94□□□□□ -0.18
AC055748.1-201ENST00000489836 PCDHB15Q9Y5E8 787 aa13.94□□□□□ -0.18
AC055748.1-201ENST00000489836 CPDO75976 1380 aa13.94□□□□□ -0.18
AC055748.1-201ENST00000489836 KTN1Q86UP2 1357 aaKnown RBP13.94□□□□□ -0.18
AC055748.1-201ENST00000489836 NINLQ9Y2I6 1382 aa13.94□□□□□ -0.18
AC055748.1-201ENST00000489836 PHRF1Q9P1Y6 1649 aaKnown RBP13.93□□□□□ -0.18
AC055748.1-201ENST00000489836 NWD2Q9ULI1 1742 aa13.93□□□□□ -0.18
AC055748.1-201ENST00000489836 RGS12O14924 1447 aa13.93□□□□□ -0.18
AC055748.1-201ENST00000489836 GCP02774 474 aa13.93□□□□□ -0.18
AC055748.1-201ENST00000489836 JUNDP17535 347 aa13.93□□□□□ -0.18
AC055748.1-201ENST00000489836 LAPTM4AQ15012 233 aa13.93□□□□□ -0.18
AC055748.1-201ENST00000489836 KIAA0232Q92628 1395 aa13.93□□□□□ -0.18
AC055748.1-201ENST00000489836 NRKQ7Z2Y5 1582 aa13.92□□□□□ -0.18
AC055748.1-201ENST00000489836 COL14A1Q05707 1796 aaKnown RBP13.92□□□□□ -0.18
AC055748.1-201ENST00000489836 SLIT3O75094 1523 aa13.92□□□□□ -0.18
AC055748.1-201ENST00000489836 TNFRSF10AO00220 468 aa13.92□□□□□ -0.18
AC055748.1-201ENST00000489836 RPIAP49247 311 aa13.92□□□□□ -0.18
AC055748.1-201ENST00000489836 HDGFL2Q7Z4V5 671 aaPredicted RBP13.92□□□□□ -0.18
AC055748.1-201ENST00000489836 TMC1Q8TDI8 760 aa13.92□□□□□ -0.18
AC055748.1-201ENST00000489836 BTG4Q9NY30 223 aa13.92□□□□□ -0.18
AC055748.1-201ENST00000489836 TERF2IPQ9NYB0 399 aa13.92□□□□□ -0.18
AC055748.1-201ENST00000489836 PLCH1Q4KWH8 1693 aa13.91□□□□□ -0.18
AC055748.1-201ENST00000489836 MON2Q7Z3U7 1717 aa13.91□□□□□ -0.18
AC055748.1-201ENST00000489836 ZC3H6P61129 1189 aaKnown RBP13.91□□□□□ -0.18
AC055748.1-201ENST00000489836 DIXDC1Q155Q3 683 aa13.91□□□□□ -0.18
AC055748.1-201ENST00000489836 RIC3Q7Z5B4 369 aa13.91□□□□□ -0.18
AC055748.1-201ENST00000489836 PRDM11Q9NQV5 511 aa13.91□□□□□ -0.18
AC055748.1-201ENST00000489836 A0A1W2PP64 1363 aa13.91□□□□□ -0.18
AC055748.1-201ENST00000489836 USP31Q70CQ4 1352 aa13.91□□□□□ -0.18
AC055748.1-201ENST00000489836 PIK3C2AO00443 1686 aa13.91□□□□□ -0.18
AC055748.1-201ENST00000489836 EDC4Q6P2E9 1401 aaKnown RBP13.9□□□□□ -0.18
AC055748.1-201ENST00000489836 SPTLC1O15269 473 aa13.9□□□□□ -0.18
AC055748.1-201ENST00000489836 GDF9O60383 454 aa13.9□□□□□ -0.18
AC055748.1-201ENST00000489836 FOXC1Q12948 553 aa13.9□□□□□ -0.18
AC055748.1-201ENST00000489836 MTMR2Q13614 643 aa13.9□□□□□ -0.18
AC055748.1-201ENST00000489836 CSPP1Q1MSJ5 1256 aa13.9□□□□□ -0.18
AC055748.1-201ENST00000489836 CDCA8Q53HL2 280 aa13.9□□□□□ -0.18
AC055748.1-201ENST00000489836 MYSM1Q5VVJ2 828 aa13.9□□□□□ -0.18
AC055748.1-201ENST00000489836 GLI3P10071 1580 aa13.9□□□□□ -0.18
AC055748.1-201ENST00000489836 NRAPQ86VF7 1730 aa13.9□□□□□ -0.18
AC055748.1-201ENST00000489836 LCE2BO14633 110 aa13.89□□□□□ -0.19
AC055748.1-201ENST00000489836 ZBTB24O43167 697 aaPredicted RBP13.89□□□□□ -0.19
AC055748.1-201ENST00000489836 EIF4G2P78344 907 aaKnown RBP eCLIP13.89□□□□□ -0.19
AC055748.1-201ENST00000489836 CHRNA2Q15822 529 aa13.89□□□□□ -0.19
AC055748.1-201ENST00000489836 PRR7Q8TB68 274 aa13.89□□□□□ -0.19
AC055748.1-201ENST00000489836 LIMD1Q9UGP4 676 aa13.89□□□□□ -0.19
AC055748.1-201ENST00000489836 ANKRD36BQ8N2N9 1353 aa13.88□□□□□ -0.19
AC055748.1-201ENST00000489836 HSPA5P11021 654 aaKnown RBP13.88□□□□□ -0.19
AC055748.1-201ENST00000489836 PKD2L1Q9P0L9 805 aa13.88□□□□□ -0.19
AC055748.1-201ENST00000489836 CD2BP2O95400 341 aaKnown RBP13.87□□□□□ -0.19
AC055748.1-201ENST00000489836 ARHGEF25Q86VW2 580 aa13.87□□□□□ -0.19
AC055748.1-201ENST00000489836 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.87□□□□□ -0.19
AC055748.1-201ENST00000489836 KCNH5Q8NCM2 988 aa13.87□□□□□ -0.19
AC055748.1-201ENST00000489836 KDM4CQ9H3R0 1056 aa13.87□□□□□ -0.19
AC055748.1-201ENST00000489836 SPATA31A5Q5VU36 1347 aa13.87□□□□□ -0.19
AC055748.1-201ENST00000489836 SPATA31A7Q8IWB4 1347 aa13.87□□□□□ -0.19
AC055748.1-201ENST00000489836 AATKQ6ZMQ8 1374 aa13.86□□□□□ -0.19
AC055748.1-201ENST00000489836 USP54Q70EL1 1684 aa13.86□□□□□ -0.19
AC055748.1-201ENST00000489836 LMO7Q8WWI1 1683 aa13.86□□□□□ -0.19
AC055748.1-201ENST00000489836 CAMTA1Q9Y6Y1 1673 aa13.86□□□□□ -0.19
AC055748.1-201ENST00000489836 GJA5P36382 358 aa13.86□□□□□ -0.19
AC055748.1-201ENST00000489836 NME9Q86XW9 330 aa13.86□□□□□ -0.19
AC055748.1-201ENST00000489836 NUDT12Q9BQG2 462 aa13.86□□□□□ -0.19
AC055748.1-201ENST00000489836 PRR20EP86478 221 aa13.85□□□□□ -0.19
AC055748.1-201ENST00000489836 PRR20CP86479 221 aa13.85□□□□□ -0.19
AC055748.1-201ENST00000489836 PRR20DP86480 221 aa13.85□□□□□ -0.19
AC055748.1-201ENST00000489836 PRR20BP86481 221 aa13.85□□□□□ -0.19
AC055748.1-201ENST00000489836 PRR20AP86496 221 aa13.85□□□□□ -0.19
AC055748.1-201ENST00000489836 TRIM32Q13049 653 aa13.85□□□□□ -0.19
AC055748.1-201ENST00000489836 NFAT5O94916 1531 aa13.85□□□□□ -0.19
AC055748.1-201ENST00000489836 OVOS2A0A0J9YW53 1432 aa13.84□□□□□ -0.19
AC055748.1-201ENST00000489836 OVOS2Q6IE36 1432 aa13.84□□□□□ -0.19
AC055748.1-201ENST00000489836 PTCRAQ6ISU1 281 aaPredicted RBP13.84□□□□□ -0.19
AC055748.1-201ENST00000489836 SPATA31A1Q5TZJ5 1347 aa13.84□□□□□ -0.19
AC055748.1-201ENST00000489836 CFAP99D6REC4 459 aa13.83□□□□□ -0.2
AC055748.1-201ENST00000489836 SEPT12Q8IYM1 358 aa13.83□□□□□ -0.2
AC055748.1-201ENST00000489836 ZBTB3Q9H5J0 574 aa13.83□□□□□ -0.2
AC055748.1-201ENST00000489836 CCDC9Q9Y3X0 531 aaKnown RBP13.83□□□□□ -0.2
AC055748.1-201ENST00000489836 COL18A1P39060 1754 aa13.82□□□□□ -0.2
AC055748.1-201ENST00000489836 QPCTQ16769 361 aa13.82□□□□□ -0.2
AC055748.1-201ENST00000489836 FAM117AQ9C073 453 aa13.82□□□□□ -0.2
AC055748.1-201ENST00000489836 STRN4Q9NRL3 753 aa13.82□□□□□ -0.2
AC055748.1-201ENST00000489836 POLR3EQ9NVU0 708 aa13.82□□□□□ -0.2
AC055748.1-201ENST00000489836 COL5A2P05997 1499 aaPredicted RBP13.81□□□□□ -0.2
AC055748.1-201ENST00000489836 SPDYE5A6NIY4 337 aa13.81□□□□□ -0.2
AC055748.1-201ENST00000489836 FYB1O15117 783 aa13.81□□□□□ -0.2
AC055748.1-201ENST00000489836 EVA1CP58658 441 aa13.81□□□□□ -0.2
AC055748.1-201ENST00000489836 LARP1Q6PKG0 1096 aaKnown RBP13.81□□□□□ -0.2
AC055748.1-201ENST00000489836 CARD14Q9BXL6 1004 aa13.81□□□□□ -0.2
AC055748.1-201ENST00000489836 MYOM1P52179 1685 aa13.8□□□□□ -0.2
AC055748.1-201ENST00000489836 C11orf95C9JLR9 678 aaPredicted RBP13.8□□□□□ -0.2
AC055748.1-201ENST00000489836 ABCC6O95255 1503 aa13.8□□□□□ -0.2
AC055748.1-201ENST00000489836 CCNYL3P0C7X3 344 aa13.79□□□□□ -0.2
AC055748.1-201ENST00000489836 CLK2P49760 499 aaKnown RBP13.79□□□□□ -0.2
AC055748.1-201ENST00000489836 TRAF7Q6Q0C0 670 aa13.79□□□□□ -0.2
AC055748.1-201ENST00000489836 THRAP3Q9Y2W1 955 aaKnown RBP13.79□□□□□ -0.2
AC055748.1-201ENST00000489836 TPRNQ4KMQ1 711 aa13.78□□□□□ -0.2
AC055748.1-201ENST00000489836 COG3Q96JB2 828 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms