RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 COX20Q5RI15 118 aa10.19□□□□□ -0.78
VPS26A-206ENST00000489794 NLRP8Q86W28 1048 aa10.19□□□□□ -0.78
VPS26A-206ENST00000489794 ABTB2Q8N961 1025 aa10.19□□□□□ -0.78
VPS26A-206ENST00000489794 ABL1P00519 1130 aa10.18□□□□□ -0.78
VPS26A-206ENST00000489794 CCDC155Q8N6L0 562 aa10.18□□□□□ -0.78
VPS26A-206ENST00000489794 GJA3Q9Y6H8 435 aa10.18□□□□□ -0.78
VPS26A-206ENST00000489794 FAM13AO94988 1023 aa10.17□□□□□ -0.78
VPS26A-206ENST00000489794 FKBP4Q02790 459 aaKnown RBP eCLIP10.17□□□□□ -0.78
VPS26A-206ENST00000489794 IER5Q5VY09 327 aa10.17□□□□□ -0.78
VPS26A-206ENST00000489794 FIGNL1Q6PIW4 674 aa10.17□□□□□ -0.78
VPS26A-206ENST00000489794 CAPN12Q6ZSI9 719 aa10.17□□□□□ -0.78
VPS26A-206ENST00000489794 C7orf43Q8WVR3 580 aa10.17□□□□□ -0.78
VPS26A-206ENST00000489794 ZIC5Q96T25 663 aa10.17□□□□□ -0.78
VPS26A-206ENST00000489794 GPAMQ9HCL2 828 aa10.17□□□□□ -0.78
VPS26A-206ENST00000489794 STIM2Q9P246 746 aa10.17□□□□□ -0.78
VPS26A-206ENST00000489794 A0A1W2PNR3 127 aa10.16□□□□□ -0.78
VPS26A-206ENST00000489794 ICMTO60725 284 aa10.16□□□□□ -0.78
VPS26A-206ENST00000489794 SCNN1AP37088 669 aa10.16□□□□□ -0.78
VPS26A-206ENST00000489794 SERPINB4P48594 390 aa10.16□□□□□ -0.78
VPS26A-206ENST00000489794 DGKZQ13574 1117 aa10.16□□□□□ -0.78
VPS26A-206ENST00000489794 RIPOR1Q6ZS17 1223 aa10.16□□□□□ -0.78
VPS26A-206ENST00000489794 TRIM22Q8IYM9 498 aa10.16□□□□□ -0.78
VPS26A-206ENST00000489794 DNMT3AQ9Y6K1 912 aaPredicted RBP10.16□□□□□ -0.78
VPS26A-206ENST00000489794 NPR3P17342 541 aa10.15□□□□□ -0.78
VPS26A-206ENST00000489794 ITGA6P23229 1130 aa10.15□□□□□ -0.78
VPS26A-206ENST00000489794 ALKBH2Q6NS38 261 aa10.15□□□□□ -0.78
VPS26A-206ENST00000489794 GLYCTKQ8IVS8 523 aa10.15□□□□□ -0.78
VPS26A-206ENST00000489794 IRF7Q92985 503 aa10.15□□□□□ -0.78
VPS26A-206ENST00000489794 SAP130Q9H0E3 1048 aa10.15□□□□□ -0.78
VPS26A-206ENST00000489794 STK17AQ9UEE5 414 aa10.15□□□□□ -0.78
VPS26A-206ENST00000489794 LRFN2Q9ULH4 789 aa10.15□□□□□ -0.78
VPS26A-206ENST00000489794 SOWAHDA6NJG2 315 aa10.14□□□□□ -0.79
VPS26A-206ENST00000489794 TGFBR3LH3BV60 316 aa10.14□□□□□ -0.79
VPS26A-206ENST00000489794 SAMD5Q5TGI4 173 aa10.14□□□□□ -0.79
VPS26A-206ENST00000489794 IFT43Q96FT9 208 aa10.14□□□□□ -0.79
VPS26A-206ENST00000489794 SUSD3Q96L08 255 aa10.14□□□□□ -0.79
VPS26A-206ENST00000489794 RUBCNLQ9H714 662 aa10.14□□□□□ -0.79
VPS26A-206ENST00000489794 FAM13BQ9NYF5 915 aa10.14□□□□□ -0.79
VPS26A-206ENST00000489794 H3BRB1 525 aa10.13□□□□□ -0.79
VPS26A-206ENST00000489794 NUCKS1Q9H1E3 243 aaKnown RBP10.13□□□□□ -0.79
VPS26A-206ENST00000489794 TUT1Q9H6E5 874 aaKnown RBP10.13□□□□□ -0.79
VPS26A-206ENST00000489794 H3BM21 787 aa10.12□□□□□ -0.79
VPS26A-206ENST00000489794 TNFRSF10BO14763 440 aa10.12□□□□□ -0.79
VPS26A-206ENST00000489794 ZNF211Q13398 564 aaPredicted RBP10.12□□□□□ -0.79
VPS26A-206ENST00000489794 LCE2CQ5TA81 110 aa10.12□□□□□ -0.79
VPS26A-206ENST00000489794 FOXR1Q6PIV2 292 aa10.12□□□□□ -0.79
VPS26A-206ENST00000489794 SND1Q7KZF4 910 aaKnown RBP eCLIP10.12□□□□□ -0.79
VPS26A-206ENST00000489794 KLK14Q9P0G3 267 aa10.12□□□□□ -0.79
VPS26A-206ENST00000489794 PPFIA3O75145 1194 aa10.11□□□□□ -0.79
VPS26A-206ENST00000489794 TRIM26Q12899 539 aaPredicted RBP10.11□□□□□ -0.79
VPS26A-206ENST00000489794 EPB42P16452 691 aa10.1□□□□□ -0.79
VPS26A-206ENST00000489794 NOM1Q5C9Z4 860 aaKnown RBP10.1□□□□□ -0.79
VPS26A-206ENST00000489794 LRRC69Q6ZNQ3 347 aa10.1□□□□□ -0.79
VPS26A-206ENST00000489794 GZF1Q9H116 711 aaPredicted RBP10.1□□□□□ -0.79
VPS26A-206ENST00000489794 PCDHGC4Q9Y5F7 938 aa10.1□□□□□ -0.79
VPS26A-206ENST00000489794 VEGFBP49765 207 aa10.09□□□□□ -0.79
VPS26A-206ENST00000489794 BTLAQ7Z6A9 289 aa10.09□□□□□ -0.79
VPS26A-206ENST00000489794 NANOS1Q8WY41 292 aaKnown RBP10.09□□□□□ -0.79
VPS26A-206ENST00000489794 PHF24Q9UPV7 400 aa10.09□□□□□ -0.79
VPS26A-206ENST00000489794 MICAL2O94851 1124 aa10.08□□□□□ -0.8
VPS26A-206ENST00000489794 FAM157BP0CG42 384 aa10.08□□□□□ -0.8
VPS26A-206ENST00000489794 LAMC2Q13753 1193 aa10.08□□□□□ -0.8
VPS26A-206ENST00000489794 DBN1Q16643 649 aa10.08□□□□□ -0.8
VPS26A-206ENST00000489794 TREML1Q86YW5 311 aa10.08□□□□□ -0.8
VPS26A-206ENST00000489794 HSH2DQ96JZ2 352 aa10.08□□□□□ -0.8
VPS26A-206ENST00000489794 TRERF1Q96PN7 1200 aa10.08□□□□□ -0.8
VPS26A-206ENST00000489794 ZCCHC2Q9C0B9 1178 aaKnown RBP10.08□□□□□ -0.8
VPS26A-206ENST00000489794 C11orf16Q9NQ32 467 aa10.08□□□□□ -0.8
VPS26A-206ENST00000489794 ANO2Q9NQ90 1003 aa10.08□□□□□ -0.8
VPS26A-206ENST00000489794 BCS1LQ9Y276 419 aa10.08□□□□□ -0.8
VPS26A-206ENST00000489794 ATXN7O15265 892 aaPredicted RBP10.07□□□□□ -0.8
VPS26A-206ENST00000489794 RPLP1P05386 114 aaKnown RBP10.07□□□□□ -0.8
VPS26A-206ENST00000489794 MPSTP25325 297 aa10.07□□□□□ -0.8
VPS26A-206ENST00000489794 ARSDP51689 593 aa10.07□□□□□ -0.8
VPS26A-206ENST00000489794 MTMR3Q13615 1198 aa10.07□□□□□ -0.8
VPS26A-206ENST00000489794 SV2AQ7L0J3 742 aa10.07□□□□□ -0.8
VPS26A-206ENST00000489794 ZNF280CQ8ND82 737 aa10.07□□□□□ -0.8
VPS26A-206ENST00000489794 ZNF837Q96EG3 531 aaPredicted RBP10.07□□□□□ -0.8
VPS26A-206ENST00000489794 CEP63Q96MT8 703 aa10.07□□□□□ -0.8
VPS26A-206ENST00000489794 BIN2Q9UBW5 565 aaPredicted RBP10.07□□□□□ -0.8
VPS26A-206ENST00000489794 PCSK2P16519 638 aa10.06□□□□□ -0.8
VPS26A-206ENST00000489794 GMPRP36959 345 aa10.06□□□□□ -0.8
VPS26A-206ENST00000489794 EIF1AXP47813 144 aaKnown RBP10.06□□□□□ -0.8
VPS26A-206ENST00000489794 ETFBKMTQ8IXQ9 262 aa10.06□□□□□ -0.8
VPS26A-206ENST00000489794 CFHR5Q9BXR6 569 aa10.06□□□□□ -0.8
VPS26A-206ENST00000489794 CUEDC1Q9NWM3 386 aaPredicted RBP10.06□□□□□ -0.8
VPS26A-206ENST00000489794 DMGDHQ9UI17 866 aaKnown RBP10.06□□□□□ -0.8
VPS26A-206ENST00000489794 ATXN7L1Q9ULK2 861 aaPredicted RBP10.06□□□□□ -0.8
VPS26A-206ENST00000489794 FAM181BA6NEQ2 426 aa10.05□□□□□ -0.8
VPS26A-206ENST00000489794 ZAP70P43403 619 aa10.05□□□□□ -0.8
VPS26A-206ENST00000489794 IDH3AP50213 366 aa10.05□□□□□ -0.8
VPS26A-206ENST00000489794 TYRO3Q06418 890 aa10.05□□□□□ -0.8
VPS26A-206ENST00000489794 AAMPQ13685 434 aa10.05□□□□□ -0.8
VPS26A-206ENST00000489794 PIK3R5Q8WYR1 880 aa10.05□□□□□ -0.8
VPS26A-206ENST00000489794 CITED4Q96RK1 184 aa10.05□□□□□ -0.8
VPS26A-206ENST00000489794 CDC14CA4D256 554 aa10.04□□□□□ -0.8
VPS26A-206ENST00000489794 NDUFB5O43674 189 aa10.04□□□□□ -0.8
VPS26A-206ENST00000489794 INPP5BP32019 993 aa10.04□□□□□ -0.8
VPS26A-206ENST00000489794 USP5P45974 858 aa10.04□□□□□ -0.8
VPS26A-206ENST00000489794 KCNQ4P56696 695 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms