RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 ONECUT3O60422 494 aaPredicted RBP12.1□□□□□ -0.47
NOD1-208ENST00000489614 ZBTB7BO15156 539 aaPredicted RBP12.1□□□□□ -0.47
NOD1-208ENST00000489614 EVA1CP58658 441 aa12.1□□□□□ -0.47
NOD1-208ENST00000489614 TMEM57Q8N5G2 664 aa12.1□□□□□ -0.47
NOD1-208ENST00000489614 ADCY9O60503 1353 aa12.1□□□□□ -0.47
NOD1-208ENST00000489614 IPO8O15397 1037 aaKnown RBP12.09□□□□□ -0.47
NOD1-208ENST00000489614 SEC24BO95487 1268 aa12.09□□□□□ -0.47
NOD1-208ENST00000489614 G2E3Q7L622 706 aa12.09□□□□□ -0.47
NOD1-208ENST00000489614 ZSCAN30Q86W11 494 aa12.09□□□□□ -0.47
NOD1-208ENST00000489614 GAS2L3Q86XJ1 694 aa12.09□□□□□ -0.47
NOD1-208ENST00000489614 CCDC94Q9BW85 323 aaPredicted RBP12.09□□□□□ -0.47
NOD1-208ENST00000489614 NFATC2IPQ8NCF5 419 aa12.09□□□□□ -0.47
NOD1-208ENST00000489614 C4AP0C0L4 1744 aa12.09□□□□□ -0.47
NOD1-208ENST00000489614 C4BP0C0L5 1744 aa12.09□□□□□ -0.47
NOD1-208ENST00000489614 TEFQ10587 303 aa12.09□□□□□ -0.47
NOD1-208ENST00000489614 CLUAP1Q96AJ1 413 aa12.09□□□□□ -0.47
NOD1-208ENST00000489614 ANTXR1Q9H6X2 564 aa12.09□□□□□ -0.47
NOD1-208ENST00000489614 KIF20AO95235 890 aa12.08□□□□□ -0.48
NOD1-208ENST00000489614 CCDC30Q5VVM6 783 aa12.08□□□□□ -0.48
NOD1-208ENST00000489614 JARID2Q92833 1246 aaPredicted RBP12.08□□□□□ -0.48
NOD1-208ENST00000489614 COG6Q9Y2V7 657 aa12.08□□□□□ -0.48
NOD1-208ENST00000489614 COL24A1Q17RW2 1714 aa12.08□□□□□ -0.48
NOD1-208ENST00000489614 API5Q9BZZ5 524 aaKnown RBP12.08□□□□□ -0.48
NOD1-208ENST00000489614 ELL2O00472 640 aaPredicted RBP12.07□□□□□ -0.48
NOD1-208ENST00000489614 ADAMTS2O95450 1211 aa12.07□□□□□ -0.48
NOD1-208ENST00000489614 PRAMEF22A3QJZ6 481 aa12.07□□□□□ -0.48
NOD1-208ENST00000489614 MTERF4Q7Z6M4 381 aaKnown RBP12.07□□□□□ -0.48
NOD1-208ENST00000489614 PCDHB15Q9Y5E8 787 aa12.07□□□□□ -0.48
NOD1-208ENST00000489614 MYH3P11055 1940 aa12.07□□□□□ -0.48
NOD1-208ENST00000489614 TSC1Q92574 1164 aa12.07□□□□□ -0.48
NOD1-208ENST00000489614 DDX19BQ9UMR2 479 aa12.07□□□□□ -0.48
NOD1-208ENST00000489614 TEX2Q8IWB9 1127 aa12.06□□□□□ -0.48
NOD1-208ENST00000489614 MARCH10Q8NA82 808 aaPredicted RBP12.06□□□□□ -0.48
NOD1-208ENST00000489614 ZNF496Q96IT1 587 aaPredicted RBP12.06□□□□□ -0.48
NOD1-208ENST00000489614 SLC4A2P04920 1241 aa12.05□□□□□ -0.48
NOD1-208ENST00000489614 HDAC1Q13547 482 aaPredicted RBP12.05□□□□□ -0.48
NOD1-208ENST00000489614 ZBTB9Q96C00 473 aa12.05□□□□□ -0.48
NOD1-208ENST00000489614 UBR3Q6ZT12 1888 aa12.05□□□□□ -0.48
NOD1-208ENST00000489614 DDX60Q8IY21 1712 aaKnown RBP12.05□□□□□ -0.48
NOD1-208ENST00000489614 IGHDP01880 384 aa12.05□□□□□ -0.48
NOD1-208ENST00000489614 FLIIQ13045 1269 aa12.05□□□□□ -0.48
NOD1-208ENST00000489614 GTPBP4Q9BZE4 634 aaKnown RBP12.05□□□□□ -0.48
NOD1-208ENST00000489614 QSER1Q2KHR3 1735 aa12.05□□□□□ -0.48
NOD1-208ENST00000489614 LETM1O95202 739 aaPredicted RBP12.05□□□□□ -0.48
NOD1-208ENST00000489614 IRX3P78415 501 aaPredicted RBP12.05□□□□□ -0.48
NOD1-208ENST00000489614 A0A1B0GUL6 1792 aa12.04□□□□□ -0.48
NOD1-208ENST00000489614 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
NOD1-208ENST00000489614 SLC39A6Q13433 755 aa12.04□□□□□ -0.48
NOD1-208ENST00000489614 PIGBQ92521 554 aa12.04□□□□□ -0.48
NOD1-208ENST00000489614 COL15A1P39059 1388 aa12.04□□□□□ -0.48
NOD1-208ENST00000489614 CENPQQ7L2Z9 268 aaPredicted RBP12.04□□□□□ -0.48
NOD1-208ENST00000489614 ATG3Q9NT62 314 aa12.04□□□□□ -0.48
NOD1-208ENST00000489614 CHPF2Q9P2E5 772 aa12.04□□□□□ -0.48
NOD1-208ENST00000489614 NUTM2BA6NNL0 878 aaPredicted RBP12.03□□□□□ -0.48
NOD1-208ENST00000489614 NUTM2EB1AL46 878 aaPredicted RBP12.03□□□□□ -0.48
NOD1-208ENST00000489614 DYNC1I1O14576 645 aa12.03□□□□□ -0.48
NOD1-208ENST00000489614 CABP4P57796 275 aa12.03□□□□□ -0.48
NOD1-208ENST00000489614 PROSER3Q2NL68 480 aa12.03□□□□□ -0.48
NOD1-208ENST00000489614 HDGFL1Q5TGJ6 251 aa12.03□□□□□ -0.48
NOD1-208ENST00000489614 NUTM2AQ8IVF1 878 aaPredicted RBP12.03□□□□□ -0.48
NOD1-208ENST00000489614 DDX21Q9NR30 783 aaKnown RBP eCLIP12.03□□□□□ -0.48
NOD1-208ENST00000489614 UTYO14607 1347 aa12.03□□□□□ -0.48
NOD1-208ENST00000489614 TERF1P54274 439 aa12.03□□□□□ -0.48
NOD1-208ENST00000489614 FMNL2Q96PY5 1086 aa12.02□□□□□ -0.48
NOD1-208ENST00000489614 SLC4A9Q96Q91 983 aa12.02□□□□□ -0.48
NOD1-208ENST00000489614 TBC1D2Q9BYX2 928 aa12.02□□□□□ -0.48
NOD1-208ENST00000489614 PHAXQ9H814 394 aaKnown RBP12.02□□□□□ -0.48
NOD1-208ENST00000489614 SNRPA1P09661 255 aaKnown RBP12.02□□□□□ -0.49
NOD1-208ENST00000489614 SIRT2Q8IXJ6 389 aa12.02□□□□□ -0.49
NOD1-208ENST00000489614 DBF4Q9UBU7 674 aaPredicted RBP12.02□□□□□ -0.49
NOD1-208ENST00000489614 FAM177BA6PVY3 158 aa12.02□□□□□ -0.49
NOD1-208ENST00000489614 EXOC5O00471 708 aa12.02□□□□□ -0.49
NOD1-208ENST00000489614 CHMP4CQ96CF2 233 aa12.02□□□□□ -0.49
NOD1-208ENST00000489614 KCNJ4P48050 445 aa12.01□□□□□ -0.49
NOD1-208ENST00000489614 RGS22Q8NE09 1264 aa12.01□□□□□ -0.49
NOD1-208ENST00000489614 AFF2P51816 1311 aa12.01□□□□□ -0.49
NOD1-208ENST00000489614 C8orf37Q96NL8 207 aa12.01□□□□□ -0.49
NOD1-208ENST00000489614 USP21Q9UK80 565 aa12.01□□□□□ -0.49
NOD1-208ENST00000489614 NBPF26B4DH59 902 aa12□□□□□ -0.49
NOD1-208ENST00000489614 NASPP49321 788 aaPredicted RBP12□□□□□ -0.49
NOD1-208ENST00000489614 CCT4P50991 539 aaKnown RBP12□□□□□ -0.49
NOD1-208ENST00000489614 ATP2B3Q16720 1220 aa12□□□□□ -0.49
NOD1-208ENST00000489614 BEND3Q5T5X7 828 aa12□□□□□ -0.49
NOD1-208ENST00000489614 NBPF14Q5TI25 921 aa12□□□□□ -0.49
NOD1-208ENST00000489614 NBPF10Q6P3W6 841 aaKnown RBP12□□□□□ -0.49
NOD1-208ENST00000489614 NBPF15Q8N660 670 aa12□□□□□ -0.49
NOD1-208ENST00000489614 HYPKQ9NX55 129 aa12□□□□□ -0.49
NOD1-208ENST00000489614 ZNF771Q7L3S4 317 aaPredicted RBP12□□□□□ -0.49
NOD1-208ENST00000489614 USP16Q9Y5T5 823 aa12□□□□□ -0.49
NOD1-208ENST00000489614 CCDC173Q0VFZ6 552 aa12□□□□□ -0.49
NOD1-208ENST00000489614 DDB1Q16531 1140 aa12□□□□□ -0.49
NOD1-208ENST00000489614 SMC5Q8IY18 1101 aa12□□□□□ -0.49
NOD1-208ENST00000489614 GJD4Q96KN9 370 aaPredicted RBP12□□□□□ -0.49
NOD1-208ENST00000489614 STK31Q9BXU1 1019 aa12□□□□□ -0.49
NOD1-208ENST00000489614 LRP5O75197 1615 aa11.99□□□□□ -0.49
NOD1-208ENST00000489614 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.99□□□□□ -0.49
NOD1-208ENST00000489614 IRX5P78411 483 aaPredicted RBP11.99□□□□□ -0.49
NOD1-208ENST00000489614 DDX54Q8TDD1 881 aaKnown RBP11.99□□□□□ -0.49
NOD1-208ENST00000489614 ITPRIPQ8IWB1 547 aa11.99□□□□□ -0.49
NOD1-208ENST00000489614 NGLY1Q96IV0 654 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms