RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 ELL2O00472 640 aaPredicted RBP11.45□□□□□ -0.58
SMKR1-202ENST00000488846 MMP10P09238 476 aa11.45□□□□□ -0.58
SMKR1-202ENST00000488846 MYL6BP14649 208 aa11.45□□□□□ -0.58
SMKR1-202ENST00000488846 NFIXQ14938 502 aa11.45□□□□□ -0.58
SMKR1-202ENST00000488846 CCDC30Q5VVM6 783 aa11.45□□□□□ -0.58
SMKR1-202ENST00000488846 TTLL7Q6ZT98 887 aa11.45□□□□□ -0.58
SMKR1-202ENST00000488846 NPM2Q86SE8 214 aaKnown RBP11.45□□□□□ -0.58
SMKR1-202ENST00000488846 CDCA7LQ96GN5 454 aa11.45□□□□□ -0.58
SMKR1-202ENST00000488846 HYPKQ9NX55 129 aa11.45□□□□□ -0.58
SMKR1-202ENST00000488846 ANXA1P04083 346 aa11.44□□□□□ -0.58
SMKR1-202ENST00000488846 DDR1Q08345 913 aa11.44□□□□□ -0.58
SMKR1-202ENST00000488846 NECTIN2Q92692 538 aa11.44□□□□□ -0.58
SMKR1-202ENST00000488846 ZNF330Q9Y3S2 320 aaPredicted RBP11.44□□□□□ -0.58
SMKR1-202ENST00000488846 KIF13BQ9NQT8 1826 aa11.44□□□□□ -0.58
SMKR1-202ENST00000488846 ATP10DQ9P241 1426 aa11.43□□□□□ -0.58
SMKR1-202ENST00000488846 GOLGB1Q14789 3259 aaKnown RBP11.43□□□□□ -0.58
SMKR1-202ENST00000488846 ZBED9Q6R2W3 1325 aa11.43□□□□□ -0.58
SMKR1-202ENST00000488846 NPM3O75607 178 aaKnown RBP11.43□□□□□ -0.58
SMKR1-202ENST00000488846 HNRNPUQ00839 825 aaKnown RBP eCLIP11.43□□□□□ -0.58
SMKR1-202ENST00000488846 HLFQ16534 295 aa11.43□□□□□ -0.58
SMKR1-202ENST00000488846 TBC1D9BQ66K14 1250 aa11.43□□□□□ -0.58
SMKR1-202ENST00000488846 GIGYF2Q6Y7W6 1299 aaKnown RBP11.43□□□□□ -0.58
SMKR1-202ENST00000488846 KIF6Q6ZMV9 814 aa11.43□□□□□ -0.58
SMKR1-202ENST00000488846 COPS6Q7L5N1 327 aa11.43□□□□□ -0.58
SMKR1-202ENST00000488846 XAGE3Q8WTP9 111 aa11.43□□□□□ -0.58
SMKR1-202ENST00000488846 ZNF652Q9Y2D9 606 aa11.43□□□□□ -0.58
SMKR1-202ENST00000488846 CD2APQ9Y5K6 639 aa11.43□□□□□ -0.58
SMKR1-202ENST00000488846 CACNA1FO60840 1977 aa11.43□□□□□ -0.58
SMKR1-202ENST00000488846 C10orf71Q711Q0 1435 aa11.43□□□□□ -0.58
SMKR1-202ENST00000488846 NUP98P52948 1817 aa11.42□□□□□ -0.58
SMKR1-202ENST00000488846 CT47B1P0C2W7 299 aaPredicted RBP11.42□□□□□ -0.58
SMKR1-202ENST00000488846 ZNF34Q8IZ26 560 aa11.42□□□□□ -0.58
SMKR1-202ENST00000488846 ZNF428Q96B54 188 aa11.42□□□□□ -0.58
SMKR1-202ENST00000488846 SYT17Q9BSW7 474 aa11.42□□□□□ -0.58
SMKR1-202ENST00000488846 FHDC1Q9C0D6 1143 aaPredicted RBP11.42□□□□□ -0.58
SMKR1-202ENST00000488846 PARP3Q9Y6F1 533 aa11.42□□□□□ -0.58
SMKR1-202ENST00000488846 CARMIL3Q8ND23 1372 aa11.41□□□□□ -0.58
SMKR1-202ENST00000488846 ANKRD13DQ6ZTN6 518 aa11.41□□□□□ -0.58
SMKR1-202ENST00000488846 PLBD2Q8NHP8 589 aa11.41□□□□□ -0.58
SMKR1-202ENST00000488846 SETDB2Q96T68 719 aa11.41□□□□□ -0.58
SMKR1-202ENST00000488846 PPP1R1BQ9UD71 204 aaPredicted RBP11.41□□□□□ -0.58
SMKR1-202ENST00000488846 AFDNP55196 1824 aaKnown RBP11.41□□□□□ -0.58
SMKR1-202ENST00000488846 UTRNP46939 3433 aa11.41□□□□□ -0.58
SMKR1-202ENST00000488846 IBTKQ9P2D0 1353 aaPredicted RBP11.41□□□□□ -0.58
SMKR1-202ENST00000488846 SERPINB2P05120 415 aa11.4□□□□□ -0.58
SMKR1-202ENST00000488846 STK31Q9BXU1 1019 aa11.4□□□□□ -0.58
SMKR1-202ENST00000488846 ZBTB3Q9H5J0 574 aa11.4□□□□□ -0.58
SMKR1-202ENST00000488846 PHAXQ9H814 394 aaKnown RBP11.4□□□□□ -0.58
SMKR1-202ENST00000488846 KIAA1551Q9HCM1 1747 aa11.4□□□□□ -0.58
SMKR1-202ENST00000488846 SLC4A2P04920 1241 aa11.39□□□□□ -0.59
SMKR1-202ENST00000488846 AIMP1Q12904 312 aaKnown RBP11.39□□□□□ -0.59
SMKR1-202ENST00000488846 TCIRG1Q13488 830 aa11.39□□□□□ -0.59
SMKR1-202ENST00000488846 HSP90AB3PQ58FF7 597 aa11.39□□□□□ -0.59
SMKR1-202ENST00000488846 NIP7Q9Y221 180 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMKR1-202ENST00000488846 ANKRD36CQ5JPF3 1778 aa11.39□□□□□ -0.59
SMKR1-202ENST00000488846 ARFGEF2Q9Y6D5 1785 aa11.39□□□□□ -0.59
SMKR1-202ENST00000488846 UBN2Q6ZU65 1347 aa11.38□□□□□ -0.59
SMKR1-202ENST00000488846 BRPF1P55201 1214 aaPredicted RBP11.38□□□□□ -0.59
SMKR1-202ENST00000488846 TGFB2P61812 414 aa11.38□□□□□ -0.59
SMKR1-202ENST00000488846 TRIM28Q13263 835 aaKnown RBP11.38□□□□□ -0.59
SMKR1-202ENST00000488846 PRR5LQ6MZQ0 368 aa11.38□□□□□ -0.59
SMKR1-202ENST00000488846 BICDL1Q6ZP65 573 aa11.38□□□□□ -0.59
SMKR1-202ENST00000488846 G2E3Q7L622 706 aa11.38□□□□□ -0.59
SMKR1-202ENST00000488846 ISCA1Q9BUE6 129 aa11.38□□□□□ -0.59
SMKR1-202ENST00000488846 PXDNLA1KZ92 1463 aa11.38□□□□□ -0.59
SMKR1-202ENST00000488846 RIC1Q4ADV7 1423 aa11.37□□□□□ -0.59
SMKR1-202ENST00000488846 KLRG2A4D1S0 409 aaPredicted RBP11.37□□□□□ -0.59
SMKR1-202ENST00000488846 DDX58O95786 925 aaKnown RBP11.37□□□□□ -0.59
SMKR1-202ENST00000488846 FLIIQ13045 1269 aa11.37□□□□□ -0.59
SMKR1-202ENST00000488846 ALDH1L2Q3SY69 923 aa11.37□□□□□ -0.59
SMKR1-202ENST00000488846 PARP10Q53GL7 1025 aa11.37□□□□□ -0.59
SMKR1-202ENST00000488846 KSR2Q6VAB6 950 aa11.37□□□□□ -0.59
SMKR1-202ENST00000488846 NLGN2Q8NFZ4 835 aa11.37□□□□□ -0.59
SMKR1-202ENST00000488846 RNF216Q9NWF9 866 aaPredicted RBP11.37□□□□□ -0.59
SMKR1-202ENST00000488846 ADCY9O60503 1353 aa11.37□□□□□ -0.59
SMKR1-202ENST00000488846 RNF123Q5XPI4 1314 aa11.36□□□□□ -0.59
SMKR1-202ENST00000488846 TCERG1O14776 1098 aaKnown RBP11.36□□□□□ -0.59
SMKR1-202ENST00000488846 NTSR2O95665 410 aa11.36□□□□□ -0.59
SMKR1-202ENST00000488846 KCNA3P22001 575 aa11.36□□□□□ -0.59
SMKR1-202ENST00000488846 TPTE2Q6XPS3 522 aa11.36□□□□□ -0.59
SMKR1-202ENST00000488846 NLRP10Q86W26 655 aa11.36□□□□□ -0.59
SMKR1-202ENST00000488846 MRPL50Q8N5N7 158 aaKnown RBP11.36□□□□□ -0.59
SMKR1-202ENST00000488846 METTL22Q9BUU2 404 aaPredicted RBP11.36□□□□□ -0.59
SMKR1-202ENST00000488846 BRIP1Q9BX63 1249 aa11.36□□□□□ -0.59
SMKR1-202ENST00000488846 NYXQ9GZU5 481 aa11.36□□□□□ -0.59
SMKR1-202ENST00000488846 ANKRD31Q8N7Z5 1873 aa11.36□□□□□ -0.59
SMKR1-202ENST00000488846 PI4KAP2A4QPH2 592 aa11.35□□□□□ -0.59
SMKR1-202ENST00000488846 SUSD4Q5VX71 490 aa11.35□□□□□ -0.59
SMKR1-202ENST00000488846 RIC3Q7Z5B4 369 aa11.35□□□□□ -0.59
SMKR1-202ENST00000488846 NBPF5PQ86XG9 351 aaPredicted RBP11.35□□□□□ -0.59
SMKR1-202ENST00000488846 PI4KAP1Q8N8J0 262 aa11.35□□□□□ -0.59
SMKR1-202ENST00000488846 CNBD1Q8NA66 436 aa11.35□□□□□ -0.59
SMKR1-202ENST00000488846 SSH1Q8WYL5 1049 aa11.35□□□□□ -0.59
SMKR1-202ENST00000488846 PDZRN3Q9UPQ7 1066 aa11.35□□□□□ -0.59
SMKR1-202ENST00000488846 BRCA1P38398 1863 aaKnown RBP11.34□□□□□ -0.59
SMKR1-202ENST00000488846 GPTP24298 496 aa11.34□□□□□ -0.59
SMKR1-202ENST00000488846 RARSP54136 660 aaKnown RBP11.34□□□□□ -0.59
SMKR1-202ENST00000488846 SLC10A5Q5PT55 438 aa11.34□□□□□ -0.59
SMKR1-202ENST00000488846 PPP1R42Q7Z4L9 355 aa11.34□□□□□ -0.59
SMKR1-202ENST00000488846 MAP3K2Q9Y2U5 619 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms