RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 THUMPD2Q9BTF0 503 aaKnown RBP24.2■■□□□ 1.46
ATG9A-222ENST00000488833 CACNA1SQ13698 1873 aa24.19■■□□□ 1.46
ATG9A-222ENST00000488833 CCDC88AQ3V6T2 1871 aa24.19■■□□□ 1.46
ATG9A-222ENST00000488833 RALBP1Q15311 655 aa24.19■■□□□ 1.46
ATG9A-222ENST00000488833 NBPF5PQ86XG9 351 aaPredicted RBP24.19■■□□□ 1.46
ATG9A-222ENST00000488833 C16orf71Q8IYS4 520 aaPredicted RBP24.19■■□□□ 1.46
ATG9A-222ENST00000488833 ZNF219Q9P2Y4 722 aaPredicted RBP24.19■■□□□ 1.46
ATG9A-222ENST00000488833 ZC3H4Q9UPT8 1303 aaKnown RBP24.18■■□□□ 1.46
ATG9A-222ENST00000488833 NFKBIEO00221 500 aa24.18■■□□□ 1.46
ATG9A-222ENST00000488833 PRELPP51888 382 aa24.17■■□□□ 1.46
ATG9A-222ENST00000488833 C21orf2O43822 256 aa24.16■■□□□ 1.46
ATG9A-222ENST00000488833 NIP7Q9Y221 180 aaKnown RBP eCLIP24.16■■□□□ 1.46
ATG9A-222ENST00000488833 ARFGEF2Q9Y6D5 1785 aa24.16■■□□□ 1.46
ATG9A-222ENST00000488833 FER1L6Q2WGJ9 1857 aa24.15■■□□□ 1.46
ATG9A-222ENST00000488833 SLX4Q8IY92 1834 aa24.15■■□□□ 1.46
ATG9A-222ENST00000488833 EIF4A1P60842 406 aaKnown RBP24.15■■□□□ 1.46
ATG9A-222ENST00000488833 STYK1Q6J9G0 422 aa24.15■■□□□ 1.46
ATG9A-222ENST00000488833 RBM46Q8TBY0 533 aaKnown RBP24.15■■□□□ 1.46
ATG9A-222ENST00000488833 CNKSR1Q969H4 720 aa24.15■■□□□ 1.46
ATG9A-222ENST00000488833 RRAGCQ9HB90 399 aa24.15■■□□□ 1.46
ATG9A-222ENST00000488833 RGL2O15211 777 aa24.14■■□□□ 1.45
ATG9A-222ENST00000488833 SRGNP10124 158 aa24.14■■□□□ 1.45
ATG9A-222ENST00000488833 DDX10Q13206 875 aaKnown RBP24.14■■□□□ 1.45
ATG9A-222ENST00000488833 NGEFQ8N5V2 710 aa24.13■■□□□ 1.45
ATG9A-222ENST00000488833 MASTLQ96GX5 879 aa24.13■■□□□ 1.45
ATG9A-222ENST00000488833 FAM177BA6PVY3 158 aa24.12■■□□□ 1.45
ATG9A-222ENST00000488833 APLP1P51693 650 aa24.12■■□□□ 1.45
ATG9A-222ENST00000488833 HLFQ16534 295 aa24.12■■□□□ 1.45
ATG9A-222ENST00000488833 PRPF40BQ6NWY9 871 aaKnown RBP24.12■■□□□ 1.45
ATG9A-222ENST00000488833 TPTE2Q6XPS3 522 aa24.11■■□□□ 1.45
ATG9A-222ENST00000488833 RRP7AQ9Y3A4 280 aaKnown RBP24.11■■□□□ 1.45
ATG9A-222ENST00000488833 DICER1Q9UPY3 1922 aaKnown RBP24.11■■□□□ 1.45
ATG9A-222ENST00000488833 MYBBP1AQ9BQG0 1328 aaKnown RBP24.1■■□□□ 1.45
ATG9A-222ENST00000488833 GLTPD2A6NH11 291 aa24.1■■□□□ 1.45
ATG9A-222ENST00000488833 RIPK4P57078 832 aa24.1■■□□□ 1.45
ATG9A-222ENST00000488833 TSPYL4Q9UJ04 414 aa24.1■■□□□ 1.45
ATG9A-222ENST00000488833 MYL6BP14649 208 aa24.09■■□□□ 1.45
ATG9A-222ENST00000488833 TAOK3Q9H2K8 898 aa24.09■■□□□ 1.45
ATG9A-222ENST00000488833 NUP98P52948 1817 aa24.09■■□□□ 1.45
ATG9A-222ENST00000488833 LTBP3Q9NS15 1303 aa24.09■■□□□ 1.45
ATG9A-222ENST00000488833 NPR1P16066 1061 aa24.08■■□□□ 1.45
ATG9A-222ENST00000488833 FSTL1Q12841 308 aa24.08■■□□□ 1.45
ATG9A-222ENST00000488833 SOGA3Q5TF21 947 aa24.08■■□□□ 1.45
ATG9A-222ENST00000488833 KIF6Q6ZMV9 814 aa24.08■■□□□ 1.45
ATG9A-222ENST00000488833 MAP3K15Q6ZN16 1313 aa24.08■■□□□ 1.44
ATG9A-222ENST00000488833 WDR90Q96KV7 1748 aa24.07■■□□□ 1.44
ATG9A-222ENST00000488833 GTF2E1P29083 439 aaPredicted RBP24.07■■□□□ 1.44
ATG9A-222ENST00000488833 ERVV-1B6SEH8 477 aa24.06■■□□□ 1.44
ATG9A-222ENST00000488833 TMPOP42166 694 aaKnown RBP24.06■■□□□ 1.44
ATG9A-222ENST00000488833 LMOD3Q0VAK6 560 aa24.06■■□□□ 1.44
ATG9A-222ENST00000488833 ERFEQ4G0M1 354 aa24.06■■□□□ 1.44
ATG9A-222ENST00000488833 TTLL7Q6ZT98 887 aa24.06■■□□□ 1.44
ATG9A-222ENST00000488833 KLRG2A4D1S0 409 aaPredicted RBP24.05■■□□□ 1.44
ATG9A-222ENST00000488833 ZBTB3Q9H5J0 574 aa24.05■■□□□ 1.44
ATG9A-222ENST00000488833 ERBB4Q15303 1308 aa24.05■■□□□ 1.44
ATG9A-222ENST00000488833 ABCC12Q96J65 1359 aa24.04■■□□□ 1.44
ATG9A-222ENST00000488833 VEGFAP15692 232 aaPredicted RBP24.04■■□□□ 1.44
ATG9A-222ENST00000488833 CCDC146Q8IYE0 955 aa24.04■■□□□ 1.44
ATG9A-222ENST00000488833 NYXQ9GZU5 481 aa24.04■■□□□ 1.44
ATG9A-222ENST00000488833 CCDC93Q567U6 631 aa24.03■■□□□ 1.44
ATG9A-222ENST00000488833 DPY19L2Q6NUT2 758 aa24.03■■□□□ 1.44
ATG9A-222ENST00000488833 SMC1BQ8NDV3 1235 aa24.03■■□□□ 1.44
ATG9A-222ENST00000488833 GPTP24298 496 aa24.02■■□□□ 1.44
ATG9A-222ENST00000488833 WDR43Q15061 677 aaKnown RBP eCLIP24.02■■□□□ 1.44
ATG9A-222ENST00000488833 NUTM1Q86Y26 1132 aa24.02■■□□□ 1.44
ATG9A-222ENST00000488833 C7orf43Q8WVR3 580 aa24.02■■□□□ 1.44
ATG9A-222ENST00000488833 EIF2S2P20042 333 aaKnown RBP24.01■■□□□ 1.43
ATG9A-222ENST00000488833 NEUROD2Q15784 382 aa24.01■■□□□ 1.43
ATG9A-222ENST00000488833 BABAM1Q9NWV8 329 aa24.01■■□□□ 1.43
ATG9A-222ENST00000488833 IBTKQ9P2D0 1353 aaPredicted RBP24.01■■□□□ 1.43
ATG9A-222ENST00000488833 UBN2Q6ZU65 1347 aa24■■□□□ 1.43
ATG9A-222ENST00000488833 ALDH1B1P30837 517 aa23.98■■□□□ 1.43
ATG9A-222ENST00000488833 HTRA3P83110 453 aa23.98■■□□□ 1.43
ATG9A-222ENST00000488833 OLFM4Q6UX06 510 aa23.98■■□□□ 1.43
ATG9A-222ENST00000488833 GIGYF2Q6Y7W6 1299 aaKnown RBP23.98■■□□□ 1.43
ATG9A-222ENST00000488833 RUNDC1Q96C34 613 aa23.98■■□□□ 1.43
ATG9A-222ENST00000488833 FKBP4Q02790 459 aaKnown RBP eCLIP23.97■■□□□ 1.43
ATG9A-222ENST00000488833 PDIA6Q15084 440 aa23.97■■□□□ 1.43
ATG9A-222ENST00000488833 RIC1Q4ADV7 1423 aa23.97■■□□□ 1.43
ATG9A-222ENST00000488833 DNAJC5GQ8N7S2 189 aa23.97■■□□□ 1.43
ATG9A-222ENST00000488833 POTECB2RU33 542 aa23.96■■□□□ 1.43
ATG9A-222ENST00000488833 ANXA1P04083 346 aa23.96■■□□□ 1.43
ATG9A-222ENST00000488833 PROSER3Q2NL68 480 aa23.96■■□□□ 1.43
ATG9A-222ENST00000488833 CRY2Q49AN0 593 aa23.96■■□□□ 1.43
ATG9A-222ENST00000488833 SUSD4Q5VX71 490 aa23.96■■□□□ 1.43
ATG9A-222ENST00000488833 LRP10Q7Z4F1 713 aa23.96■■□□□ 1.43
ATG9A-222ENST00000488833 ZNF34Q8IZ26 560 aa23.96■■□□□ 1.43
ATG9A-222ENST00000488833 RTKN2Q8IZC4 609 aa23.95■■□□□ 1.42
ATG9A-222ENST00000488833 NECTIN2Q92692 538 aa23.95■■□□□ 1.42
ATG9A-222ENST00000488833 RPGRQ92834 1020 aaKnown RBP23.95■■□□□ 1.42
ATG9A-222ENST00000488833 ZNF277Q9NRM2 450 aaPredicted RBP23.95■■□□□ 1.42
ATG9A-222ENST00000488833 DDNO94850 711 aaPredicted RBP23.94■■□□□ 1.42
ATG9A-222ENST00000488833 NTSR2O95665 410 aa23.94■■□□□ 1.42
ATG9A-222ENST00000488833 LAS1LQ9Y4W2 734 aaKnown RBP23.94■■□□□ 1.42
ATG9A-222ENST00000488833 PARP10Q53GL7 1025 aa23.93■■□□□ 1.42
ATG9A-222ENST00000488833 PPP1R42Q7Z4L9 355 aa23.93■■□□□ 1.42
ATG9A-222ENST00000488833 ADAMTS8Q9UP79 889 aa23.93■■□□□ 1.42
ATG9A-222ENST00000488833 TRIM35Q9UPQ4 493 aa23.93■■□□□ 1.42
ATG9A-222ENST00000488833 ANKRD36CQ5JPF3 1778 aa23.93■■□□□ 1.42
ATG9A-222ENST00000488833 CHL1O00533 1208 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms