RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 BCORQ6W2J9 1755 aa19.46■□□□□ 0.71
CXCL12-207ENST00000488591 MAP3K15Q6ZN16 1313 aa19.46■□□□□ 0.71
CXCL12-207ENST00000488591 NPHP1O15259 732 aa19.45■□□□□ 0.7
CXCL12-207ENST00000488591 TGFB2P61812 414 aa19.45■□□□□ 0.7
CXCL12-207ENST00000488591 GOLGA2Q08379 1002 aa19.45■□□□□ 0.7
CXCL12-207ENST00000488591 GPR162Q16538 588 aa19.45■□□□□ 0.7
CXCL12-207ENST00000488591 TTLL7Q6ZT98 887 aa19.45■□□□□ 0.7
CXCL12-207ENST00000488591 MYH16Q9H6N6 1097 aa19.45■□□□□ 0.7
CXCL12-207ENST00000488591 CHPF2Q9P2E5 772 aa19.45■□□□□ 0.7
CXCL12-207ENST00000488591 CARMIL3Q8ND23 1372 aa19.44■□□□□ 0.7
CXCL12-207ENST00000488591 C10orf71Q711Q0 1435 aa19.44■□□□□ 0.7
CXCL12-207ENST00000488591 ANXA1P04083 346 aa19.44■□□□□ 0.7
CXCL12-207ENST00000488591 PROSER3Q2NL68 480 aa19.44■□□□□ 0.7
CXCL12-207ENST00000488591 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
CXCL12-207ENST00000488591 ZBTB3Q9H5J0 574 aa19.44■□□□□ 0.7
CXCL12-207ENST00000488591 HYPKQ9NX55 129 aa19.44■□□□□ 0.7
CXCL12-207ENST00000488591 AIMP1Q12904 312 aaKnown RBP19.43■□□□□ 0.7
CXCL12-207ENST00000488591 HLFQ16534 295 aa19.43■□□□□ 0.7
CXCL12-207ENST00000488591 CCDC30Q5VVM6 783 aa19.43■□□□□ 0.7
CXCL12-207ENST00000488591 COPS6Q7L5N1 327 aa19.43■□□□□ 0.7
CXCL12-207ENST00000488591 NIP7Q9Y221 180 aaKnown RBP eCLIP19.43■□□□□ 0.7
CXCL12-207ENST00000488591 KIF13BQ9NQT8 1826 aa19.43■□□□□ 0.7
CXCL12-207ENST00000488591 TWISTNBQ3B726 338 aaPredicted RBP19.42■□□□□ 0.7
CXCL12-207ENST00000488591 LRP10Q7Z4F1 713 aa19.42■□□□□ 0.7
CXCL12-207ENST00000488591 XAGE3Q8WTP9 111 aa19.42■□□□□ 0.7
CXCL12-207ENST00000488591 FANCIQ9NVI1 1328 aa19.42■□□□□ 0.7
CXCL12-207ENST00000488591 GIGYF2Q6Y7W6 1299 aaKnown RBP19.41■□□□□ 0.7
CXCL12-207ENST00000488591 NBPF5PQ86XG9 351 aaPredicted RBP19.41■□□□□ 0.7
CXCL12-207ENST00000488591 TSPYL6Q8N831 410 aa19.41■□□□□ 0.7
CXCL12-207ENST00000488591 AFDNP55196 1824 aaKnown RBP19.41■□□□□ 0.7
CXCL12-207ENST00000488591 A0A0G2JLW4 131 aa19.4■□□□□ 0.7
CXCL12-207ENST00000488591 TPTE2Q6XPS3 522 aa19.4■□□□□ 0.7
CXCL12-207ENST00000488591 CNBD1Q8NA66 436 aa19.4■□□□□ 0.7
CXCL12-207ENST00000488591 STK31Q9BXU1 1019 aa19.4■□□□□ 0.7
CXCL12-207ENST00000488591 NRXN2Q9P2S2 1712 aa19.39■□□□□ 0.7
CXCL12-207ENST00000488591 NUP98P52948 1817 aa19.39■□□□□ 0.7
CXCL12-207ENST00000488591 DPEP1P16444 411 aa19.39■□□□□ 0.69
CXCL12-207ENST00000488591 ST5P78524 1137 aa19.39■□□□□ 0.69
CXCL12-207ENST00000488591 ZNF521Q96K83 1311 aa19.39■□□□□ 0.69
CXCL12-207ENST00000488591 PXDNLA1KZ92 1463 aa19.38■□□□□ 0.69
CXCL12-207ENST00000488591 GTF2E1P29083 439 aaPredicted RBP19.38■□□□□ 0.69
CXCL12-207ENST00000488591 EXOSC9Q06265 439 aaKnown RBP19.38■□□□□ 0.69
CXCL12-207ENST00000488591 HSP90AB3PQ58FF7 597 aa19.38■□□□□ 0.69
CXCL12-207ENST00000488591 PRR5LQ6MZQ0 368 aa19.38■□□□□ 0.69
CXCL12-207ENST00000488591 SPINK5Q9NQ38 1064 aaPredicted RBP19.38■□□□□ 0.69
CXCL12-207ENST00000488591 ATP10DQ9P241 1426 aa19.37■□□□□ 0.69
CXCL12-207ENST00000488591 GRIN3BO60391 1043 aa19.37■□□□□ 0.69
CXCL12-207ENST00000488591 PDE6BP35913 854 aa19.37■□□□□ 0.69
CXCL12-207ENST00000488591 ANKRD13DQ6ZTN6 518 aa19.37■□□□□ 0.69
CXCL12-207ENST00000488591 PLBD2Q8NHP8 589 aa19.37■□□□□ 0.69
CXCL12-207ENST00000488591 BRIP1Q9BX63 1249 aa19.37■□□□□ 0.69
CXCL12-207ENST00000488591 NYXQ9GZU5 481 aa19.37■□□□□ 0.69
CXCL12-207ENST00000488591 PDZRN3Q9UPQ7 1066 aa19.37■□□□□ 0.69
CXCL12-207ENST00000488591 FAM177BA6PVY3 158 aa19.36■□□□□ 0.69
CXCL12-207ENST00000488591 E9PSI1 815 aa19.36■□□□□ 0.69
CXCL12-207ENST00000488591 PARP10Q53GL7 1025 aa19.36■□□□□ 0.69
CXCL12-207ENST00000488591 PIM2Q9P1W9 311 aa19.36■□□□□ 0.69
CXCL12-207ENST00000488591 N4BP2Q86UW6 1770 aaPredicted RBP19.36■□□□□ 0.69
CXCL12-207ENST00000488591 H0YIN7 160 aa19.35■□□□□ 0.69
CXCL12-207ENST00000488591 DDX58O95786 925 aaKnown RBP19.35■□□□□ 0.69
CXCL12-207ENST00000488591 GPTP24298 496 aa19.35■□□□□ 0.69
CXCL12-207ENST00000488591 PPP1R42Q7Z4L9 355 aa19.35■□□□□ 0.69
CXCL12-207ENST00000488591 ZNF34Q8IZ26 560 aa19.35■□□□□ 0.69
CXCL12-207ENST00000488591 VAMP4O75379 141 aa19.34■□□□□ 0.69
CXCL12-207ENST00000488591 CHRNA5P30532 468 aa19.34■□□□□ 0.69
CXCL12-207ENST00000488591 TCIRG1Q13488 830 aa19.34■□□□□ 0.69
CXCL12-207ENST00000488591 RIC3Q7Z5B4 369 aa19.34■□□□□ 0.69
CXCL12-207ENST00000488591 C2CD5Q86YS7 1000 aa19.34■□□□□ 0.69
CXCL12-207ENST00000488591 CCDC24Q8N4L8 307 aa19.34■□□□□ 0.69
CXCL12-207ENST00000488591 PHAXQ9H814 394 aaKnown RBP19.34■□□□□ 0.69
CXCL12-207ENST00000488591 WWC3Q9ULE0 1092 aa19.34■□□□□ 0.69
CXCL12-207ENST00000488591 SLC4A2P04920 1241 aa19.33■□□□□ 0.68
CXCL12-207ENST00000488591 YBX3P16989 372 aaKnown RBP eCLIP19.33■□□□□ 0.68
CXCL12-207ENST00000488591 BCS1LQ9Y276 419 aa19.33■□□□□ 0.68
CXCL12-207ENST00000488591 KIAA1551Q9HCM1 1747 aa19.33■□□□□ 0.68
CXCL12-207ENST00000488591 TCERG1O14776 1098 aaKnown RBP19.32■□□□□ 0.68
CXCL12-207ENST00000488591 KCNA3P22001 575 aa19.32■□□□□ 0.68
CXCL12-207ENST00000488591 DALRD3Q5D0E6 543 aaKnown RBP19.32■□□□□ 0.68
CXCL12-207ENST00000488591 SUSD4Q5VX71 490 aa19.32■□□□□ 0.68
CXCL12-207ENST00000488591 UBN2Q6ZU65 1347 aa19.31■□□□□ 0.68
CXCL12-207ENST00000488591 SLFN5Q08AF3 891 aa19.31■□□□□ 0.68
CXCL12-207ENST00000488591 IBTKQ9P2D0 1353 aaPredicted RBP19.31■□□□□ 0.68
CXCL12-207ENST00000488591 UTP14AQ9BVJ6 771 aaKnown RBP19.3■□□□□ 0.68
CXCL12-207ENST00000488591 ANKRD31Q8N7Z5 1873 aa19.29■□□□□ 0.68
CXCL12-207ENST00000488591 NUTM1Q86Y26 1132 aa19.29■□□□□ 0.68
CXCL12-207ENST00000488591 TTLL6Q8N841 843 aa19.29■□□□□ 0.68
CXCL12-207ENST00000488591 ZNF622Q969S3 477 aaKnown RBP eCLIP19.29■□□□□ 0.68
CXCL12-207ENST00000488591 ANKRD36CQ5JPF3 1778 aa19.29■□□□□ 0.68
CXCL12-207ENST00000488591 RNF123Q5XPI4 1314 aa19.28■□□□□ 0.68
CXCL12-207ENST00000488591 NTSR2O95665 410 aa19.28■□□□□ 0.68
CXCL12-207ENST00000488591 HNRNPUQ00839 825 aaKnown RBP eCLIP19.28■□□□□ 0.68
CXCL12-207ENST00000488591 ERFEQ4G0M1 354 aa19.28■□□□□ 0.68
CXCL12-207ENST00000488591 NLRP10Q86W26 655 aa19.28■□□□□ 0.68
CXCL12-207ENST00000488591 CDCA7LQ96GN5 454 aa19.28■□□□□ 0.68
CXCL12-207ENST00000488591 CACNA1FO60840 1977 aa19.28■□□□□ 0.68
CXCL12-207ENST00000488591 BRCA1P38398 1863 aaKnown RBP19.27■□□□□ 0.68
CXCL12-207ENST00000488591 STYK1Q6J9G0 422 aa19.27■□□□□ 0.68
CXCL12-207ENST00000488591 KSR2Q6VAB6 950 aa19.27■□□□□ 0.68
CXCL12-207ENST00000488591 MASTLQ96GX5 879 aa19.27■□□□□ 0.68
CXCL12-207ENST00000488591 TRMT112Q9UI30 125 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms