RNA–Protein interactions for RNA: ENST00000488349.1

SCRN3-209, Transcript of secernin 3, humanhuman

TSL 4

Gene SCRN3, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-209ENST00000488349 COL11A2P13942 1736 aaPredicted RBP29.16■■■□□ 2.26
SCRN3-209ENST00000488349 EIF2S2P20042 333 aaKnown RBP29.15■■■□□ 2.26
SCRN3-209ENST00000488349 PROSER3Q2NL68 480 aa29.15■■■□□ 2.26
SCRN3-209ENST00000488349 NGEFQ8N5V2 710 aa29.15■■■□□ 2.26
SCRN3-209ENST00000488349 SETDB2Q96T68 719 aa29.15■■■□□ 2.26
SCRN3-209ENST00000488349 SENP3-EIF4A1A0A087X0R7 540 aa29.14■■■□□ 2.26
SCRN3-209ENST00000488349 IFT57Q9NWB7 429 aa29.14■■■□□ 2.26
SCRN3-209ENST00000488349 ZNF652Q9Y2D9 606 aa29.14■■■□□ 2.26
SCRN3-209ENST00000488349 BCS1LQ9Y276 419 aa29.13■■■□□ 2.25
SCRN3-209ENST00000488349 MAP3K15Q6ZN16 1313 aa29.13■■■□□ 2.25
SCRN3-209ENST00000488349 ANXA1P04083 346 aa29.12■■■□□ 2.25
SCRN3-209ENST00000488349 CCDC24Q8N4L8 307 aa29.12■■■□□ 2.25
SCRN3-209ENST00000488349 ERVV-1B6SEH8 477 aa29.11■■■□□ 2.25
SCRN3-209ENST00000488349 CCDC27Q2M243 656 aa29.11■■■□□ 2.25
SCRN3-209ENST00000488349 PIM2Q9P1W9 311 aa29.11■■■□□ 2.25
SCRN3-209ENST00000488349 HOXB7P09629 217 aa29.1■■■□□ 2.25
SCRN3-209ENST00000488349 GNAI1P63096 354 aa29.1■■■□□ 2.25
SCRN3-209ENST00000488349 CALD1Q05682 793 aaKnown RBP29.1■■■□□ 2.25
SCRN3-209ENST00000488349 NECTIN2Q92692 538 aa29.1■■■□□ 2.25
SCRN3-209ENST00000488349 ATP10DQ9P241 1426 aa29.1■■■□□ 2.25
SCRN3-209ENST00000488349 CNBD1Q8NA66 436 aa29.09■■■□□ 2.25
SCRN3-209ENST00000488349 NIP7Q9Y221 180 aaKnown RBP eCLIP29.09■■■□□ 2.25
SCRN3-209ENST00000488349 NCBP3Q53F19 620 aaKnown RBP29.08■■■□□ 2.25
SCRN3-209ENST00000488349 BRIP1Q9BX63 1249 aa29.08■■■□□ 2.25
SCRN3-209ENST00000488349 DUSP27Q5VZP5 1158 aa29.07■■■□□ 2.24
SCRN3-209ENST00000488349 KIF6Q6ZMV9 814 aa29.07■■■□□ 2.24
SCRN3-209ENST00000488349 C2CD5Q86YS7 1000 aa29.07■■■□□ 2.24
SCRN3-209ENST00000488349 WWC1Q8IX03 1113 aa29.07■■■□□ 2.24
SCRN3-209ENST00000488349 ZNF784Q8NCA9 323 aaPredicted RBP29.07■■■□□ 2.24
SCRN3-209ENST00000488349 ZBTB3Q9H5J0 574 aa29.07■■■□□ 2.24
SCRN3-209ENST00000488349 DALRD3Q5D0E6 543 aaKnown RBP29.06■■■□□ 2.24
SCRN3-209ENST00000488349 DDX21Q9NR30 783 aaKnown RBP eCLIP29.06■■■□□ 2.24
SCRN3-209ENST00000488349 NBPF5PQ86XG9 351 aaPredicted RBP29.05■■■□□ 2.24
SCRN3-209ENST00000488349 ANKRD36CQ5JPF3 1778 aa29.05■■■□□ 2.24
SCRN3-209ENST00000488349 ADCY9O60503 1353 aa29.04■■■□□ 2.24
SCRN3-209ENST00000488349 HDGFL1Q5TGJ6 251 aa29.04■■■□□ 2.24
SCRN3-209ENST00000488349 CHPF2Q9P2E5 772 aa29.04■■■□□ 2.24
SCRN3-209ENST00000488349 TNRC6CQ9HCJ0 1690 aaKnown RBP29.03■■■□□ 2.24
SCRN3-209ENST00000488349 UBN2Q6ZU65 1347 aa29.03■■■□□ 2.24
SCRN3-209ENST00000488349 ST5P78524 1137 aa29.03■■■□□ 2.24
SCRN3-209ENST00000488349 GIGYF2Q6Y7W6 1299 aaKnown RBP29.03■■■□□ 2.24
SCRN3-209ENST00000488349 H0YIN7 160 aa29.02■■■□□ 2.24
SCRN3-209ENST00000488349 PDE6BP35913 854 aa29.02■■■□□ 2.24
SCRN3-209ENST00000488349 FAM9BQ8IZU0 186 aa29.02■■■□□ 2.24
SCRN3-209ENST00000488349 XAGE3Q8WTP9 111 aa29.02■■■□□ 2.24
SCRN3-209ENST00000488349 ARFGEF2Q9Y6D5 1785 aa29.01■■■□□ 2.23
SCRN3-209ENST00000488349 COPS6Q7L5N1 327 aa29.01■■■□□ 2.23
SCRN3-209ENST00000488349 ZNF34Q8IZ26 560 aa29.01■■■□□ 2.23
SCRN3-209ENST00000488349 C8orf58Q8NAV2 365 aa29.01■■■□□ 2.23
SCRN3-209ENST00000488349 FAM177BA6PVY3 158 aa29■■■□□ 2.23
SCRN3-209ENST00000488349 PDZRN3Q9UPQ7 1066 aa29■■■□□ 2.23
SCRN3-209ENST00000488349 IBTKQ9P2D0 1353 aaPredicted RBP29■■■□□ 2.23
SCRN3-209ENST00000488349 CACNA1SQ13698 1873 aa29■■■□□ 2.23
SCRN3-209ENST00000488349 IL16Q14005 1332 aa28.99■■■□□ 2.23
SCRN3-209ENST00000488349 GPTP24298 496 aa28.99■■■□□ 2.23
SCRN3-209ENST00000488349 TPTE2Q6XPS3 522 aa28.99■■■□□ 2.23
SCRN3-209ENST00000488349 ARHGAP27Q6ZUM4 889 aa28.99■■■□□ 2.23
SCRN3-209ENST00000488349 TSR2Q969E8 191 aaKnown RBP28.99■■■□□ 2.23
SCRN3-209ENST00000488349 ABCC12Q96J65 1359 aa28.99■■■□□ 2.23
SCRN3-209ENST00000488349 KLRG2A4D1S0 409 aaPredicted RBP28.98■■■□□ 2.23
SCRN3-209ENST00000488349 NPHP1O15259 732 aa28.98■■■□□ 2.23
SCRN3-209ENST00000488349 TTLL6Q8N841 843 aa28.98■■■□□ 2.23
SCRN3-209ENST00000488349 SBF1O95248 1867 aa28.97■■■□□ 2.23
SCRN3-209ENST00000488349 SLX4Q8IY92 1834 aa28.97■■■□□ 2.23
SCRN3-209ENST00000488349 ELL2O00472 640 aaPredicted RBP28.97■■■□□ 2.23
SCRN3-209ENST00000488349 AIMP1Q12904 312 aaKnown RBP28.97■■■□□ 2.23
SCRN3-209ENST00000488349 DBF4Q9UBU7 674 aaPredicted RBP28.97■■■□□ 2.23
SCRN3-209ENST00000488349 SRGNP10124 158 aa28.96■■■□□ 2.23
SCRN3-209ENST00000488349 SUSD4Q5VX71 490 aa28.96■■■□□ 2.23
SCRN3-209ENST00000488349 TSPYL6Q8N831 410 aa28.96■■■□□ 2.23
SCRN3-209ENST00000488349 SALL2Q9Y467 1007 aaPredicted RBP28.95■■■□□ 2.22
SCRN3-209ENST00000488349 RIC1Q4ADV7 1423 aa28.94■■■□□ 2.22
SCRN3-209ENST00000488349 NTSR2O95665 410 aa28.94■■■□□ 2.22
SCRN3-209ENST00000488349 NUTM1Q86Y26 1132 aa28.94■■■□□ 2.22
SCRN3-209ENST00000488349 ZNF622Q969S3 477 aaKnown RBP eCLIP28.94■■■□□ 2.22
SCRN3-209ENST00000488349 NYXQ9GZU5 481 aa28.94■■■□□ 2.22
SCRN3-209ENST00000488349 STYK1Q6J9G0 422 aa28.93■■■□□ 2.22
SCRN3-209ENST00000488349 ERFEQ4G0M1 354 aa28.92■■■□□ 2.22
SCRN3-209ENST00000488349 WDR63Q8IWG1 891 aa28.92■■■□□ 2.22
SCRN3-209ENST00000488349 MASTLQ96GX5 879 aa28.92■■■□□ 2.22
SCRN3-209ENST00000488349 HYPKQ9NX55 129 aa28.92■■■□□ 2.22
SCRN3-209ENST00000488349 FER1L6Q2WGJ9 1857 aa28.91■■■□□ 2.22
SCRN3-209ENST00000488349 PARP10Q53GL7 1025 aa28.9■■■□□ 2.22
SCRN3-209ENST00000488349 FANCIQ9NVI1 1328 aa28.9■■■□□ 2.22
SCRN3-209ENST00000488349 TCIRG1Q13488 830 aa28.89■■■□□ 2.22
SCRN3-209ENST00000488349 PLBD2Q8NHP8 589 aa28.89■■■□□ 2.22
SCRN3-209ENST00000488349 GTF2E1P29083 439 aaPredicted RBP28.88■■■□□ 2.21
SCRN3-209ENST00000488349 RASSF7Q02833 373 aa28.88■■■□□ 2.21
SCRN3-209ENST00000488349 HSP90AB3PQ58FF7 597 aa28.88■■■□□ 2.21
SCRN3-209ENST00000488349 NLRP10Q86W26 655 aa28.88■■■□□ 2.21
SCRN3-209ENST00000488349 CNKSR1Q969H4 720 aa28.88■■■□□ 2.21
SCRN3-209ENST00000488349 PHAXQ9H814 394 aaKnown RBP28.88■■■□□ 2.21
SCRN3-209ENST00000488349 SPINK5Q9NQ38 1064 aaPredicted RBP28.88■■■□□ 2.21
SCRN3-209ENST00000488349 NPR1P16066 1061 aa28.87■■■□□ 2.21
SCRN3-209ENST00000488349 PRELPP51888 382 aa28.87■■■□□ 2.21
SCRN3-209ENST00000488349 CRY2Q49AN0 593 aa28.87■■■□□ 2.21
SCRN3-209ENST00000488349 PRPF40BQ6NWY9 871 aaKnown RBP28.87■■■□□ 2.21
SCRN3-209ENST00000488349 ANKRD13DQ6ZTN6 518 aa28.87■■■□□ 2.21
SCRN3-209ENST00000488349 LAMB2P55268 1798 aa28.87■■■□□ 2.21
SCRN3-209ENST00000488349 CCDC88AQ3V6T2 1871 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms