RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 ABCD1P33897 745 aa7.49□□□□□ -1.21
SIK3-212ENST00000488337 SF3A1Q15459 793 aaKnown RBP7.49□□□□□ -1.21
SIK3-212ENST00000488337 RANBP17Q9H2T7 1088 aaKnown RBP7.49□□□□□ -1.21
SIK3-212ENST00000488337 L2HGDHQ9H9P8 463 aa7.49□□□□□ -1.21
SIK3-212ENST00000488337 MBD3O95983 291 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 ELF1P32519 619 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 PKP1Q13835 747 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 CCDC93Q567U6 631 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 LEKR1Q6ZMV7 388 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 SH3GL3Q99963 347 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 IRAK4Q9NWZ3 460 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 PCDHB15Q9Y5E8 787 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 COL17A1Q9UMD9 1497 aaPredicted RBP7.48□□□□□ -1.21
SIK3-212ENST00000488337 A0A0G2JS52 829 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 EME2A4GXA9 379 aaPredicted RBP7.48□□□□□ -1.21
SIK3-212ENST00000488337 CRYMQ14894 314 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 ISM2Q6H9L7 571 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 NUB1Q9Y5A7 615 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 H7C1W4 665 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 GPTP24298 496 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 FOXR1Q6PIV2 292 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 TADA2BQ86TJ2 420 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 BLOC1S6Q9UL45 172 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 ITSN2Q9NZM3 1697 aa7.48□□□□□ -1.21
SIK3-212ENST00000488337 PRPF40AO75400 957 aaKnown RBP7.47□□□□□ -1.21
SIK3-212ENST00000488337 HNRNPH1P31943 449 aaKnown RBP7.47□□□□□ -1.21
SIK3-212ENST00000488337 WWC2Q6AWC2 1192 aa7.47□□□□□ -1.21
SIK3-212ENST00000488337 CPLX2Q6PUV4 134 aaKnown RBP7.47□□□□□ -1.21
SIK3-212ENST00000488337 FMNL3Q8IVF7 1028 aa7.47□□□□□ -1.21
SIK3-212ENST00000488337 BAG1Q99933 345 aaPredicted RBP7.47□□□□□ -1.21
SIK3-212ENST00000488337 SUN2Q9UH99 717 aa7.47□□□□□ -1.21
SIK3-212ENST00000488337 ABCA8O94911 1581 aa7.47□□□□□ -1.21
SIK3-212ENST00000488337 SASH3O75995 380 aa7.47□□□□□ -1.21
SIK3-212ENST00000488337 IMPDH2P12268 514 aa7.47□□□□□ -1.21
SIK3-212ENST00000488337 WLSQ5T9L3 541 aa7.47□□□□□ -1.21
SIK3-212ENST00000488337 ANKRD45Q5TZF3 282 aa7.47□□□□□ -1.21
SIK3-212ENST00000488337 CCDC141Q6ZP82 1450 aa7.47□□□□□ -1.21
SIK3-212ENST00000488337 MICAL1Q8TDZ2 1067 aa7.47□□□□□ -1.21
SIK3-212ENST00000488337 XAGE2Q96GT9 111 aa7.47□□□□□ -1.21
SIK3-212ENST00000488337 SHANK2Q9UPX8 1470 aa7.46□□□□□ -1.21
SIK3-212ENST00000488337 CDCA2Q69YH5 1023 aaPredicted RBP7.46□□□□□ -1.21
SIK3-212ENST00000488337 A0A087WUV0 522 aaPredicted RBP7.46□□□□□ -1.22
SIK3-212ENST00000488337 ECEL1O95672 775 aa7.46□□□□□ -1.22
SIK3-212ENST00000488337 TBC1D8O95759 1140 aa7.46□□□□□ -1.22
SIK3-212ENST00000488337 GPS2Q13227 327 aa7.46□□□□□ -1.22
SIK3-212ENST00000488337 RASA3Q14644 834 aa7.46□□□□□ -1.22
SIK3-212ENST00000488337 AP1ARQ63HQ0 302 aa7.46□□□□□ -1.22
SIK3-212ENST00000488337 PIK3R5Q8WYR1 880 aa7.46□□□□□ -1.22
SIK3-212ENST00000488337 VEZTQ9HBM0 779 aa7.46□□□□□ -1.22
SIK3-212ENST00000488337 LMCD1Q9NZU5 365 aa7.46□□□□□ -1.22
SIK3-212ENST00000488337 ADAM21Q9UKJ8 722 aa7.46□□□□□ -1.22
SIK3-212ENST00000488337 RBM12BQ8IXT5 1001 aaKnown RBP7.46□□□□□ -1.22
SIK3-212ENST00000488337 TCP11L2Q8N4U5 519 aa7.46□□□□□ -1.22
SIK3-212ENST00000488337 TCHHQ07283 1943 aa7.46□□□□□ -1.22
SIK3-212ENST00000488337 ELP1O95163 1332 aa7.45□□□□□ -1.22
SIK3-212ENST00000488337 U2AF1L5P0DN76 240 aaPredicted RBP7.45□□□□□ -1.22
SIK3-212ENST00000488337 U2AF1Q01081 240 aaKnown RBP eCLIP7.45□□□□□ -1.22
SIK3-212ENST00000488337 PDCD2Q16342 344 aaPredicted RBP7.45□□□□□ -1.22
SIK3-212ENST00000488337 LMOD2Q6P5Q4 547 aa7.45□□□□□ -1.22
SIK3-212ENST00000488337 AGAP3Q96P47 875 aa7.45□□□□□ -1.22
SIK3-212ENST00000488337 KIF2AO00139 706 aaPredicted RBP7.45□□□□□ -1.22
SIK3-212ENST00000488337 PREPLQ4J6C6 727 aaPredicted RBP7.45□□□□□ -1.22
SIK3-212ENST00000488337 CWC27Q6UX04 472 aaKnown RBP7.45□□□□□ -1.22
SIK3-212ENST00000488337 RUNDC1Q96C34 613 aa7.45□□□□□ -1.22
SIK3-212ENST00000488337 SUDS3Q9H7L9 328 aaPredicted RBP7.45□□□□□ -1.22
SIK3-212ENST00000488337 NEBLO76041 1014 aa7.45□□□□□ -1.22
SIK3-212ENST00000488337 SLC24A3Q9HC58 644 aa7.45□□□□□ -1.22
SIK3-212ENST00000488337 ZCCHC17Q9NP64 241 aaKnown RBP7.45□□□□□ -1.22
SIK3-212ENST00000488337 MKRN1Q9UHC7 482 aaKnown RBP7.45□□□□□ -1.22
SIK3-212ENST00000488337 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.45□□□□□ -1.22
SIK3-212ENST00000488337 ATP10BO94823 1461 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 A2MP01023 1474 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 GOLGA6CA6NDK9 693 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 GOLGA6BA6NDN3 693 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 ZSCAN9O15535 394 aaPredicted RBP7.44□□□□□ -1.22
SIK3-212ENST00000488337 GOLGA6DP0CG33 693 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 RAB27AP51159 221 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 NEDD9Q14511 834 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 NUTM2GQ5VZR2 741 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 C16orf45Q96MC5 204 aaPredicted RBP7.44□□□□□ -1.22
SIK3-212ENST00000488337 ZNF396Q96N95 335 aaPredicted RBP7.44□□□□□ -1.22
SIK3-212ENST00000488337 TRIM6Q9C030 488 aaPredicted RBP7.44□□□□□ -1.22
SIK3-212ENST00000488337 GOLGA6AQ9NYA3 693 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 PECAM1P16284 738 aaPredicted RBP7.44□□□□□ -1.22
SIK3-212ENST00000488337 POLD1P28340 1107 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 OAS2P29728 719 aaKnown RBP7.44□□□□□ -1.22
SIK3-212ENST00000488337 SCRN1Q12765 414 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 ZKSCAN2Q63HK3 967 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 DZIP3Q86Y13 1208 aaKnown RBP7.44□□□□□ -1.22
SIK3-212ENST00000488337 NUTM1Q86Y26 1132 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 RTF1Q92541 710 aaKnown RBP7.44□□□□□ -1.22
SIK3-212ENST00000488337 TBC1D5Q92609 795 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 PPRC1Q5VV67 1664 aaKnown RBP7.44□□□□□ -1.22
SIK3-212ENST00000488337 TMCO5BA8MYB1 307 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 SNUPNO95149 360 aaKnown RBP7.44□□□□□ -1.22
SIK3-212ENST00000488337 RARSP54136 660 aaKnown RBP7.44□□□□□ -1.22
SIK3-212ENST00000488337 CDC37Q16543 378 aaPredicted RBP7.44□□□□□ -1.22
SIK3-212ENST00000488337 CFAP70Q5T0N1 1121 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 ITPRIPQ8IWB1 547 aa7.44□□□□□ -1.22
SIK3-212ENST00000488337 EXOC8Q8IYI6 725 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms