RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 IBTKQ9P2D0 1353 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-213ENST00000488131 SAMD9Q5K651 1589 aa5.98□□□□□ -1.45
CDC42BPA-213ENST00000488131 BICRAQ9NZM4 1560 aa5.98□□□□□ -1.45
CDC42BPA-213ENST00000488131 ARHGEF12Q9NZN5 1544 aa5.98□□□□□ -1.45
CDC42BPA-213ENST00000488131 FHOD3Q2V2M9 1422 aa5.98□□□□□ -1.45
CDC42BPA-213ENST00000488131 GRIN2BQ13224 1484 aa5.98□□□□□ -1.45
CDC42BPA-213ENST00000488131 CARMIL1Q5VZK9 1371 aa5.98□□□□□ -1.45
CDC42BPA-213ENST00000488131 UPP2O95045 317 aa5.98□□□□□ -1.45
CDC42BPA-213ENST00000488131 CSB-PGBD3P0DP91 1061 aa5.98□□□□□ -1.45
CDC42BPA-213ENST00000488131 WDR4P57081 412 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-213ENST00000488131 CCDC173Q0VFZ6 552 aa5.98□□□□□ -1.45
CDC42BPA-213ENST00000488131 SLFNL1Q499Z3 407 aa5.98□□□□□ -1.45
CDC42BPA-213ENST00000488131 HS1BP3Q53T59 392 aa5.98□□□□□ -1.45
CDC42BPA-213ENST00000488131 STK32AQ8WU08 396 aa5.98□□□□□ -1.45
CDC42BPA-213ENST00000488131 USTQ9Y2C2 406 aa5.98□□□□□ -1.45
CDC42BPA-213ENST00000488131 RTEL1-TNFRSF6BF6WH68 1400 aa5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 ROCK1Q13464 1354 aa5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 ZBTB7CA1YPR0 619 aa5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 DYNC1I1O14576 645 aa5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 KIF20AO95235 890 aa5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 MCCD1P59942 119 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 DZIP3Q86Y13 1208 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 IPO4Q8TEX9 1081 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 TBC1D32Q96NH3 1257 aa5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 PURBQ96QR8 312 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 MPHOSPH9Q99550 1183 aa5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 C1QTNF2Q9BXJ5 285 aa5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 SLKQ9H2G2 1235 aaPredicted RBP5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 MKRN1Q9UHC7 482 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 EPRSP07814 1512 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 ARHGAP31Q2M1Z3 1444 aa5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 PLXNC1O60486 1568 aa5.97□□□□□ -1.45
CDC42BPA-213ENST00000488131 MTUS2Q5JR59 1369 aa5.96□□□□□ -1.45
CDC42BPA-213ENST00000488131 PLIN1O60240 522 aa5.96□□□□□ -1.45
CDC42BPA-213ENST00000488131 ZSCAN20P17040 1043 aaPredicted RBP5.96□□□□□ -1.45
CDC42BPA-213ENST00000488131 CANXP27824 592 aaKnown RBP5.96□□□□□ -1.45
CDC42BPA-213ENST00000488131 ELOAQ14241 798 aaKnown RBP5.96□□□□□ -1.45
CDC42BPA-213ENST00000488131 BPHLQ86WA6 291 aaPredicted RBP5.96□□□□□ -1.45
CDC42BPA-213ENST00000488131 CHMP5Q9NZZ3 219 aa5.96□□□□□ -1.45
CDC42BPA-213ENST00000488131 SLAIN2Q9P270 581 aa5.96□□□□□ -1.45
CDC42BPA-213ENST00000488131 NAP1L2Q9ULW6 460 aaPredicted RBP5.96□□□□□ -1.45
CDC42BPA-213ENST00000488131 SHROOM2Q13796 1616 aa5.96□□□□□ -1.46
CDC42BPA-213ENST00000488131 NINLQ9Y2I6 1382 aa5.96□□□□□ -1.46
CDC42BPA-213ENST00000488131 ZNF500O60304 480 aaPredicted RBP5.96□□□□□ -1.46
CDC42BPA-213ENST00000488131 MAN1A2O60476 641 aa5.96□□□□□ -1.46
CDC42BPA-213ENST00000488131 PTMSP20962 102 aa5.96□□□□□ -1.46
CDC42BPA-213ENST00000488131 PTK7Q13308 1070 aa5.96□□□□□ -1.46
CDC42BPA-213ENST00000488131 AGERQ15109 404 aa5.96□□□□□ -1.46
CDC42BPA-213ENST00000488131 C20orf194Q5TEA3 1177 aa5.96□□□□□ -1.46
CDC42BPA-213ENST00000488131 TMEM164Q5U3C3 297 aa5.96□□□□□ -1.46
CDC42BPA-213ENST00000488131 CDCA7Q9BWT1 371 aaPredicted RBP5.96□□□□□ -1.46
CDC42BPA-213ENST00000488131 GTPBP4Q9BZE4 634 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-213ENST00000488131 CC2D2AQ9P2K1 1620 aa5.95□□□□□ -1.46
CDC42BPA-213ENST00000488131 HMGXB3Q12766 1538 aa5.95□□□□□ -1.46
CDC42BPA-213ENST00000488131 TIMP2P16035 220 aa5.95□□□□□ -1.46
CDC42BPA-213ENST00000488131 IRS1P35568 1242 aa5.95□□□□□ -1.46
CDC42BPA-213ENST00000488131 CLDN10P78369 228 aa5.95□□□□□ -1.46
CDC42BPA-213ENST00000488131 NR5A1Q13285 461 aa5.95□□□□□ -1.46
CDC42BPA-213ENST00000488131 CNGB1Q14028 1251 aaPredicted RBP5.95□□□□□ -1.46
CDC42BPA-213ENST00000488131 ZNF326Q5BKZ1 582 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-213ENST00000488131 CCDC94Q9BW85 323 aaPredicted RBP5.95□□□□□ -1.46
CDC42BPA-213ENST00000488131 NOVA2Q9UNW9 492 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-213ENST00000488131 TLL2Q9Y6L7 1015 aa5.95□□□□□ -1.46
CDC42BPA-213ENST00000488131 CFTRP13569 1480 aa5.95□□□□□ -1.46
CDC42BPA-213ENST00000488131 CUL7Q14999 1698 aa5.95□□□□□ -1.46
CDC42BPA-213ENST00000488131 DNMT1P26358 1616 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 FAM196BA6NMK8 535 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 USP17L15C9J2P7 530 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 USP17L10C9JJH3 530 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 USP17L13C9JLJ4 530 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 USP17L12C9JPN9 530 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 USP17L11C9JVI0 530 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 USP17L21D6R901 530 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 USP17L18D6R9N7 530 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 USP17L22D6RA61 530 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 USP17L17D6RBQ6 530 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 USP17L19D6RCP7 530 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 USP17L20D6RJB6 530 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 DKK1O94907 266 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 LETM1O95202 739 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 DDIT3P35638 169 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 FAM69CQ0P6D2 419 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 USP17L24Q0WX57 530 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 TAF3Q5VWG9 929 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 ZNF521Q96K83 1311 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 KIAA1107Q9UPP5 1409 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 PZPP20742 1482 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 ZBTB7BO15156 539 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 BRD1O95696 1058 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 SKOR2Q2VWA4 1001 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 MAP7D1Q3KQU3 841 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 CDK15Q96Q40 435 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 GZF1Q9H116 711 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 ZHX1Q9UKY1 873 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 KIAA1024Q9UPX6 916 aa5.94□□□□□ -1.46
CDC42BPA-213ENST00000488131 LAMC1P11047 1609 aa5.93□□□□□ -1.46
CDC42BPA-213ENST00000488131 MAGI3Q5TCQ9 1506 aa5.93□□□□□ -1.46
CDC42BPA-213ENST00000488131 ABCC2Q92887 1545 aa5.93□□□□□ -1.46
CDC42BPA-213ENST00000488131 UQCRHLA0A096LP55 91 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms