RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 ANKRD31Q8N7Z5 1873 aa30.95■■■□□ 2.55
RNF38-208ENST00000488058 KIF6Q6ZMV9 814 aa30.95■■■□□ 2.55
RNF38-208ENST00000488058 NECTIN2Q92692 538 aa30.95■■■□□ 2.55
RNF38-208ENST00000488058 DLEC1Q9Y238 1755 aa30.94■■■□□ 2.54
RNF38-208ENST00000488058 SENP3-EIF4A1A0A087X0R7 540 aa30.94■■■□□ 2.54
RNF38-208ENST00000488058 HLFQ16534 295 aa30.94■■■□□ 2.54
RNF38-208ENST00000488058 KRT24Q2M2I5 525 aa30.94■■■□□ 2.54
RNF38-208ENST00000488058 NIP7Q9Y221 180 aaKnown RBP eCLIP30.94■■■□□ 2.54
RNF38-208ENST00000488058 ERBB4Q15303 1308 aa30.94■■■□□ 2.54
RNF38-208ENST00000488058 H0YIN7 160 aa30.93■■■□□ 2.54
RNF38-208ENST00000488058 ST5P78524 1137 aa30.93■■■□□ 2.54
RNF38-208ENST00000488058 TTLL7Q6ZT98 887 aa30.93■■■□□ 2.54
RNF38-208ENST00000488058 FAM177BA6PVY3 158 aa30.92■■■□□ 2.54
RNF38-208ENST00000488058 NBPF5PQ86XG9 351 aaPredicted RBP30.92■■■□□ 2.54
RNF38-208ENST00000488058 CFAP44Q96MT7 982 aa30.91■■■□□ 2.54
RNF38-208ENST00000488058 BRIP1Q9BX63 1249 aa30.91■■■□□ 2.54
RNF38-208ENST00000488058 ZBTB3Q9H5J0 574 aa30.91■■■□□ 2.54
RNF38-208ENST00000488058 MAP3K15Q6ZN16 1313 aa30.91■■■□□ 2.54
RNF38-208ENST00000488058 NUP98P52948 1817 aa30.91■■■□□ 2.54
RNF38-208ENST00000488058 ANXA1P04083 346 aa30.9■■■□□ 2.54
RNF38-208ENST00000488058 PDE6BP35913 854 aa30.9■■■□□ 2.54
RNF38-208ENST00000488058 RGL2O15211 777 aa30.89■■■□□ 2.54
RNF38-208ENST00000488058 CALD1Q05682 793 aaKnown RBP30.89■■■□□ 2.54
RNF38-208ENST00000488058 COL11A2P13942 1736 aaPredicted RBP30.88■■■□□ 2.53
RNF38-208ENST00000488058 ERVV-1B6SEH8 477 aa30.88■■■□□ 2.53
RNF38-208ENST00000488058 ZNF622Q969S3 477 aaKnown RBP eCLIP30.88■■■□□ 2.53
RNF38-208ENST00000488058 MBIPQ9NS73 344 aa30.88■■■□□ 2.53
RNF38-208ENST00000488058 PDIA6Q15084 440 aa30.87■■■□□ 2.53
RNF38-208ENST00000488058 PROSER3Q2NL68 480 aa30.87■■■□□ 2.53
RNF38-208ENST00000488058 ATP10DQ9P241 1426 aa30.87■■■□□ 2.53
RNF38-208ENST00000488058 TTLL6Q8N841 843 aa30.86■■■□□ 2.53
RNF38-208ENST00000488058 GNAI1P63096 354 aa30.85■■■□□ 2.53
RNF38-208ENST00000488058 TPTE2Q6XPS3 522 aa30.85■■■□□ 2.53
RNF38-208ENST00000488058 IFT57Q9NWB7 429 aa30.85■■■□□ 2.53
RNF38-208ENST00000488058 GTF2E1P29083 439 aaPredicted RBP30.84■■■□□ 2.53
RNF38-208ENST00000488058 PDZRN3Q9UPQ7 1066 aa30.84■■■□□ 2.53
RNF38-208ENST00000488058 ZNF853P0CG23 659 aa30.83■■■□□ 2.53
RNF38-208ENST00000488058 GPTP24298 496 aa30.83■■■□□ 2.53
RNF38-208ENST00000488058 AIMP1Q12904 312 aaKnown RBP30.83■■■□□ 2.53
RNF38-208ENST00000488058 HDGFL1Q5TGJ6 251 aa30.83■■■□□ 2.53
RNF38-208ENST00000488058 ZNF526Q8TF50 670 aaPredicted RBP30.83■■■□□ 2.53
RNF38-208ENST00000488058 ADCY9O60503 1353 aa30.82■■■□□ 2.52
RNF38-208ENST00000488058 LRP10Q7Z4F1 713 aa30.82■■■□□ 2.52
RNF38-208ENST00000488058 CACNA1SQ13698 1873 aa30.82■■■□□ 2.52
RNF38-208ENST00000488058 DUSP27Q5VZP5 1158 aa30.81■■■□□ 2.52
RNF38-208ENST00000488058 DDX21Q9NR30 783 aaKnown RBP eCLIP30.81■■■□□ 2.52
RNF38-208ENST00000488058 CHPF2Q9P2E5 772 aa30.81■■■□□ 2.52
RNF38-208ENST00000488058 HOXB7P09629 217 aa30.8■■■□□ 2.52
RNF38-208ENST00000488058 GIGYF2Q6Y7W6 1299 aaKnown RBP30.8■■■□□ 2.52
RNF38-208ENST00000488058 COPS6Q7L5N1 327 aa30.8■■■□□ 2.52
RNF38-208ENST00000488058 XAGE3Q8WTP9 111 aa30.8■■■□□ 2.52
RNF38-208ENST00000488058 ZNF219Q9P2Y4 722 aaPredicted RBP30.8■■■□□ 2.52
RNF38-208ENST00000488058 NYXQ9GZU5 481 aa30.78■■■□□ 2.52
RNF38-208ENST00000488058 ELL2O00472 640 aaPredicted RBP30.77■■■□□ 2.52
RNF38-208ENST00000488058 NUTM1Q86Y26 1132 aa30.77■■■□□ 2.52
RNF38-208ENST00000488058 FAM9BQ8IZU0 186 aa30.77■■■□□ 2.52
RNF38-208ENST00000488058 UBN2Q6ZU65 1347 aa30.76■■■□□ 2.52
RNF38-208ENST00000488058 SRGNP10124 158 aa30.76■■■□□ 2.51
RNF38-208ENST00000488058 C9orf131Q5VYM1 1079 aa30.76■■■□□ 2.51
RNF38-208ENST00000488058 MASTLQ96GX5 879 aa30.76■■■□□ 2.51
RNF38-208ENST00000488058 GPBP1L1Q9HC44 474 aaPredicted RBP30.76■■■□□ 2.51
RNF38-208ENST00000488058 SALL2Q9Y467 1007 aaPredicted RBP30.76■■■□□ 2.51
RNF38-208ENST00000488058 RASSF7Q02833 373 aa30.75■■■□□ 2.51
RNF38-208ENST00000488058 STYK1Q6J9G0 422 aa30.75■■■□□ 2.51
RNF38-208ENST00000488058 ZNF34Q8IZ26 560 aa30.75■■■□□ 2.51
RNF38-208ENST00000488058 CNKSR1Q969H4 720 aa30.75■■■□□ 2.51
RNF38-208ENST00000488058 CCDC27Q2M243 656 aa30.74■■■□□ 2.51
RNF38-208ENST00000488058 SUSD4Q5VX71 490 aa30.74■■■□□ 2.51
RNF38-208ENST00000488058 WWC1Q8IX03 1113 aa30.74■■■□□ 2.51
RNF38-208ENST00000488058 RNF181Q9P0P0 153 aa30.74■■■□□ 2.51
RNF38-208ENST00000488058 DBF4Q9UBU7 674 aaPredicted RBP30.74■■■□□ 2.51
RNF38-208ENST00000488058 C21orf2O43822 256 aa30.73■■■□□ 2.51
RNF38-208ENST00000488058 ERFEQ4G0M1 354 aa30.73■■■□□ 2.51
RNF38-208ENST00000488058 ABCC12Q96J65 1359 aa30.73■■■□□ 2.51
RNF38-208ENST00000488058 TNRC6CQ9HCJ0 1690 aaKnown RBP30.73■■■□□ 2.51
RNF38-208ENST00000488058 ANKRD36CQ5JPF3 1778 aa30.73■■■□□ 2.51
RNF38-208ENST00000488058 SBF1O95248 1867 aa30.72■■■□□ 2.51
RNF38-208ENST00000488058 SLX4Q8IY92 1834 aa30.72■■■□□ 2.51
RNF38-208ENST00000488058 ARFGEF2Q9Y6D5 1785 aa30.71■■■□□ 2.51
RNF38-208ENST00000488058 PPP1R42Q7Z4L9 355 aa30.71■■■□□ 2.51
RNF38-208ENST00000488058 C8orf58Q8NAV2 365 aa30.71■■■□□ 2.51
RNF38-208ENST00000488058 TSR2Q969E8 191 aaKnown RBP30.71■■■□□ 2.51
RNF38-208ENST00000488058 IBTKQ9P2D0 1353 aaPredicted RBP30.7■■■□□ 2.51
RNF38-208ENST00000488058 NPR1P16066 1061 aa30.7■■■□□ 2.51
RNF38-208ENST00000488058 PARP10Q53GL7 1025 aa30.7■■■□□ 2.51
RNF38-208ENST00000488058 HSP90AB3PQ58FF7 597 aa30.7■■■□□ 2.51
RNF38-208ENST00000488058 PRPF40BQ6NWY9 871 aaKnown RBP30.7■■■□□ 2.51
RNF38-208ENST00000488058 HYPKQ9NX55 129 aa30.69■■■□□ 2.5
RNF38-208ENST00000488058 NTSR2O95665 410 aa30.68■■■□□ 2.5
RNF38-208ENST00000488058 KLRG2A4D1S0 409 aaPredicted RBP30.67■■■□□ 2.5
RNF38-208ENST00000488058 CCDC88AQ3V6T2 1871 aa30.67■■■□□ 2.5
RNF38-208ENST00000488058 UTP14AQ9BVJ6 771 aaKnown RBP30.66■■■□□ 2.5
RNF38-208ENST00000488058 NFKBIEO00221 500 aa30.65■■■□□ 2.5
RNF38-208ENST00000488058 TCIRG1Q13488 830 aa30.65■■■□□ 2.5
RNF38-208ENST00000488058 ANKRD13DQ6ZTN6 518 aa30.65■■■□□ 2.5
RNF38-208ENST00000488058 PLBD2Q8NHP8 589 aa30.65■■■□□ 2.5
RNF38-208ENST00000488058 LMNB1P20700 586 aa30.64■■■□□ 2.5
RNF38-208ENST00000488058 NCBP3Q53F19 620 aaKnown RBP30.64■■■□□ 2.5
RNF38-208ENST00000488058 TSPYL6Q8N831 410 aa30.64■■■□□ 2.5
RNF38-208ENST00000488058 FER1L6Q2WGJ9 1857 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms