RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 UBR3Q6ZT12 1888 aa17.9■□□□□ 0.46
NUP188-207ENST00000487952 R3HDM1Q15032 1099 aaKnown RBP17.9■□□□□ 0.46
NUP188-207ENST00000487952 ANKRD13DQ6ZTN6 518 aa17.9■□□□□ 0.46
NUP188-207ENST00000487952 COL23A1Q86Y22 540 aaPredicted RBP17.9■□□□□ 0.46
NUP188-207ENST00000487952 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.9■□□□□ 0.46
NUP188-207ENST00000487952 PLBD2Q8NHP8 589 aa17.9■□□□□ 0.46
NUP188-207ENST00000487952 NOB1Q9ULX3 412 aaKnown RBP17.9■□□□□ 0.46
NUP188-207ENST00000487952 ZNF652Q9Y2D9 606 aa17.9■□□□□ 0.46
NUP188-207ENST00000487952 API5Q9BZZ5 524 aaKnown RBP17.89■□□□□ 0.45
NUP188-207ENST00000487952 SRP68Q9UHB9 627 aaKnown RBP17.89■□□□□ 0.45
NUP188-207ENST00000487952 USP42Q9H9J4 1324 aaKnown RBP17.89■□□□□ 0.45
NUP188-207ENST00000487952 CACNA1FO60840 1977 aa17.88■□□□□ 0.45
NUP188-207ENST00000487952 ERVV-1B6SEH8 477 aa17.88■□□□□ 0.45
NUP188-207ENST00000487952 CAMTA2O94983 1202 aa17.88■□□□□ 0.45
NUP188-207ENST00000487952 USPL1Q5W0Q7 1092 aa17.88■□□□□ 0.45
NUP188-207ENST00000487952 KSR2Q6VAB6 950 aa17.88■□□□□ 0.45
NUP188-207ENST00000487952 PI4KAP2A4QPH2 592 aa17.87■□□□□ 0.45
NUP188-207ENST00000487952 PSDA5PKW4 1024 aaPredicted RBP17.87■□□□□ 0.45
NUP188-207ENST00000487952 HSP90AB3PQ58FF7 597 aa17.87■□□□□ 0.45
NUP188-207ENST00000487952 ZKSCAN2Q63HK3 967 aa17.87■□□□□ 0.45
NUP188-207ENST00000487952 PI4KAP1Q8N8J0 262 aa17.87■□□□□ 0.45
NUP188-207ENST00000487952 NEXNQ0ZGT2 675 aa17.86■□□□□ 0.45
NUP188-207ENST00000487952 GIGYF2Q6Y7W6 1299 aaKnown RBP17.86■□□□□ 0.45
NUP188-207ENST00000487952 DNAAF4Q8WXU2 420 aa17.86■□□□□ 0.45
NUP188-207ENST00000487952 ARHGAP45Q92619 1136 aa17.86■□□□□ 0.45
NUP188-207ENST00000487952 MAP3K2Q9Y2U5 619 aa17.86■□□□□ 0.45
NUP188-207ENST00000487952 TUBGCP6Q96RT7 1819 aa17.86■□□□□ 0.45
NUP188-207ENST00000487952 RGL2O15211 777 aa17.85■□□□□ 0.45
NUP188-207ENST00000487952 SLC4A10Q6U841 1118 aa17.85■□□□□ 0.45
NUP188-207ENST00000487952 CLEC4GQ6UXB4 293 aa17.85■□□□□ 0.45
NUP188-207ENST00000487952 ATF7IPQ6VMQ6 1270 aa17.85■□□□□ 0.45
NUP188-207ENST00000487952 SLC16A10Q8TF71 515 aa17.85■□□□□ 0.45
NUP188-207ENST00000487952 QSER1Q2KHR3 1735 aa17.84■□□□□ 0.45
NUP188-207ENST00000487952 ADCY9O60503 1353 aa17.84■□□□□ 0.45
NUP188-207ENST00000487952 F6X3S4 739 aa17.84■□□□□ 0.45
NUP188-207ENST00000487952 MS4A1P11836 297 aa17.84■□□□□ 0.45
NUP188-207ENST00000487952 GYS1P13807 737 aa17.84■□□□□ 0.45
NUP188-207ENST00000487952 HLFQ16534 295 aa17.84■□□□□ 0.45
NUP188-207ENST00000487952 FTSJ3Q8IY81 847 aaKnown RBP17.84■□□□□ 0.45
NUP188-207ENST00000487952 NLGN1Q8N2Q7 840 aa17.84■□□□□ 0.45
NUP188-207ENST00000487952 C4AP0C0L4 1744 aa17.84■□□□□ 0.45
NUP188-207ENST00000487952 MYD88Q99836 296 aa17.83■□□□□ 0.44
NUP188-207ENST00000487952 METTL22Q9BUU2 404 aaPredicted RBP17.83■□□□□ 0.44
NUP188-207ENST00000487952 TRIM27P14373 513 aa17.82■□□□□ 0.44
NUP188-207ENST00000487952 RRP1P56182 461 aaKnown RBP17.82■□□□□ 0.44
NUP188-207ENST00000487952 TCIRG1Q13488 830 aa17.82■□□□□ 0.44
NUP188-207ENST00000487952 FKBP8Q14318 412 aa17.82■□□□□ 0.44
NUP188-207ENST00000487952 MSL1Q68DK7 614 aa17.82■□□□□ 0.44
NUP188-207ENST00000487952 BICDL1Q6ZP65 573 aa17.82■□□□□ 0.44
NUP188-207ENST00000487952 CLUAP1Q96AJ1 413 aa17.82■□□□□ 0.44
NUP188-207ENST00000487952 BCL2L12Q9HB09 334 aa17.82■□□□□ 0.44
NUP188-207ENST00000487952 NIP7Q9Y221 180 aaKnown RBP eCLIP17.82■□□□□ 0.44
NUP188-207ENST00000487952 SCN7AQ01118 1682 aa17.82■□□□□ 0.44
NUP188-207ENST00000487952 PLIN1O60240 522 aa17.81■□□□□ 0.44
NUP188-207ENST00000487952 GPTP24298 496 aa17.81■□□□□ 0.44
NUP188-207ENST00000487952 DZIP1LQ8IYY4 767 aaKnown RBP17.81■□□□□ 0.44
NUP188-207ENST00000487952 PDGFDQ9GZP0 370 aaPredicted RBP17.81■□□□□ 0.44
NUP188-207ENST00000487952 ATP10DQ9P241 1426 aa17.81■□□□□ 0.44
NUP188-207ENST00000487952 ATP5J2-PTCD1G3V325 749 aa17.8■□□□□ 0.44
NUP188-207ENST00000487952 PARP10Q53GL7 1025 aa17.8■□□□□ 0.44
NUP188-207ENST00000487952 TBC1D9BQ66K14 1250 aa17.8■□□□□ 0.44
NUP188-207ENST00000487952 SETDB2Q96T68 719 aa17.8■□□□□ 0.44
NUP188-207ENST00000487952 SUPT16HQ9Y5B9 1047 aaKnown RBP17.8■□□□□ 0.44
NUP188-207ENST00000487952 BCORQ6W2J9 1755 aa17.8■□□□□ 0.44
NUP188-207ENST00000487952 ZBTB7AO95365 584 aa17.79■□□□□ 0.44
NUP188-207ENST00000487952 CCT4P50991 539 aaKnown RBP17.79■□□□□ 0.44
NUP188-207ENST00000487952 LINS1Q8NG48 757 aa17.79■□□□□ 0.44
NUP188-207ENST00000487952 SRCIN1Q9C0H9 1055 aa17.79■□□□□ 0.44
NUP188-207ENST00000487952 MTFR1LQ9H019 292 aa17.79■□□□□ 0.44
NUP188-207ENST00000487952 ABCC4O15439 1325 aa17.78■□□□□ 0.44
NUP188-207ENST00000487952 PXDNLA1KZ92 1463 aa17.78■□□□□ 0.44
NUP188-207ENST00000487952 NPHP1O15259 732 aa17.78■□□□□ 0.44
NUP188-207ENST00000487952 NFIXQ14938 502 aa17.78■□□□□ 0.44
NUP188-207ENST00000487952 ZNF34Q8IZ26 560 aa17.78■□□□□ 0.44
NUP188-207ENST00000487952 ISCA1Q9BUE6 129 aa17.78■□□□□ 0.44
NUP188-207ENST00000487952 TNNQ9UQP3 1299 aa17.78■□□□□ 0.44
NUP188-207ENST00000487952 ARFGEF2Q9Y6D5 1785 aa17.78■□□□□ 0.44
NUP188-207ENST00000487952 FAM177BA6PVY3 158 aa17.77■□□□□ 0.44
NUP188-207ENST00000487952 ALDH1L1O75891 902 aa17.77■□□□□ 0.44
NUP188-207ENST00000487952 MMP10P09238 476 aa17.77■□□□□ 0.44
NUP188-207ENST00000487952 TRIM28Q13263 835 aaKnown RBP17.77■□□□□ 0.44
NUP188-207ENST00000487952 BEND3Q5T5X7 828 aa17.77■□□□□ 0.44
NUP188-207ENST00000487952 PPP1R42Q7Z4L9 355 aa17.77■□□□□ 0.44
NUP188-207ENST00000487952 CCDC191Q8NCU4 936 aa17.77■□□□□ 0.44
NUP188-207ENST00000487952 CWC25Q9NXE8 425 aaPredicted RBP17.77■□□□□ 0.44
NUP188-207ENST00000487952 PARP3Q9Y6F1 533 aa17.77■□□□□ 0.44
NUP188-207ENST00000487952 CARMIL3Q8ND23 1372 aa17.77■□□□□ 0.43
NUP188-207ENST00000487952 NEURL1BA8MQ27 555 aa17.76■□□□□ 0.43
NUP188-207ENST00000487952 IGKV5-2P06315 115 aa17.76■□□□□ 0.43
NUP188-207ENST00000487952 POLD1P28340 1107 aa17.76■□□□□ 0.43
NUP188-207ENST00000487952 GTF2E1P29083 439 aaPredicted RBP17.76■□□□□ 0.43
NUP188-207ENST00000487952 PDE3AQ14432 1141 aa17.76■□□□□ 0.43
NUP188-207ENST00000487952 CWF19L2Q2TBE0 894 aaKnown RBP17.76■□□□□ 0.43
NUP188-207ENST00000487952 NLRP10Q86W26 655 aa17.76■□□□□ 0.43
NUP188-207ENST00000487952 NBPF5PQ86XG9 351 aaPredicted RBP17.76■□□□□ 0.43
NUP188-207ENST00000487952 ATF5Q9Y2D1 282 aaPredicted RBP17.76■□□□□ 0.43
NUP188-207ENST00000487952 UBN2Q6ZU65 1347 aa17.75■□□□□ 0.43
NUP188-207ENST00000487952 NUP98P52948 1817 aa17.75■□□□□ 0.43
NUP188-207ENST00000487952 TM4SF1P30408 202 aa17.75■□□□□ 0.43
NUP188-207ENST00000487952 INTS3Q68E01 1043 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms