RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 PDZRN3Q9UPQ7 1066 aa26.73■■□□□ 1.87
TRIM8-204ENST00000487927 ARFGEF2Q9Y6D5 1785 aa26.72■■□□□ 1.87
TRIM8-204ENST00000487927 CCER2I3L3R5 266 aa26.72■■□□□ 1.87
TRIM8-204ENST00000487927 CEP350Q5VT06 3117 aa26.72■■□□□ 1.87
TRIM8-204ENST00000487927 FER1L6Q2WGJ9 1857 aa26.72■■□□□ 1.87
TRIM8-204ENST00000487927 HSPA6P17066 643 aa26.71■■□□□ 1.87
TRIM8-204ENST00000487927 ZNF622Q969S3 477 aaKnown RBP eCLIP26.71■■□□□ 1.87
TRIM8-204ENST00000487927 SLX4Q8IY92 1834 aa26.71■■□□□ 1.87
TRIM8-204ENST00000487927 TIAM2Q8IVF5 1701 aa26.7■■□□□ 1.87
TRIM8-204ENST00000487927 NFKBIEO00221 500 aa26.7■■□□□ 1.86
TRIM8-204ENST00000487927 ZNF652Q9Y2D9 606 aa26.7■■□□□ 1.86
TRIM8-204ENST00000487927 TNRC6CQ9HCJ0 1690 aaKnown RBP26.7■■□□□ 1.86
TRIM8-204ENST00000487927 NUP98P52948 1817 aa26.69■■□□□ 1.86
TRIM8-204ENST00000487927 MYBBP1AQ9BQG0 1328 aaKnown RBP26.69■■□□□ 1.86
TRIM8-204ENST00000487927 RGL2O15211 777 aa26.69■■□□□ 1.86
TRIM8-204ENST00000487927 ST5P78524 1137 aa26.69■■□□□ 1.86
TRIM8-204ENST00000487927 LMNB1P20700 586 aa26.68■■□□□ 1.86
TRIM8-204ENST00000487927 HLFQ16534 295 aa26.68■■□□□ 1.86
TRIM8-204ENST00000487927 NPHP1O15259 732 aa26.67■■□□□ 1.86
TRIM8-204ENST00000487927 TOMM70O94826 608 aa26.67■■□□□ 1.86
TRIM8-204ENST00000487927 SRGNP10124 158 aa26.67■■□□□ 1.86
TRIM8-204ENST00000487927 RIPK4P57078 832 aa26.67■■□□□ 1.86
TRIM8-204ENST00000487927 NBPF5PQ86XG9 351 aaPredicted RBP26.67■■□□□ 1.86
TRIM8-204ENST00000487927 DICER1Q9UPY3 1922 aaKnown RBP26.67■■□□□ 1.86
TRIM8-204ENST00000487927 C21orf2O43822 256 aa26.66■■□□□ 1.86
TRIM8-204ENST00000487927 NIP7Q9Y221 180 aaKnown RBP eCLIP26.66■■□□□ 1.86
TRIM8-204ENST00000487927 TMPOP42166 694 aaKnown RBP26.65■■□□□ 1.86
TRIM8-204ENST00000487927 STYK1Q6J9G0 422 aa26.65■■□□□ 1.86
TRIM8-204ENST00000487927 ZNF219Q9P2Y4 722 aaPredicted RBP26.65■■□□□ 1.86
TRIM8-204ENST00000487927 KDM2BQ8NHM5 1336 aa26.65■■□□□ 1.86
TRIM8-204ENST00000487927 ZC3H4Q9UPT8 1303 aaKnown RBP26.65■■□□□ 1.86
TRIM8-204ENST00000487927 NGEFQ8N5V2 710 aa26.64■■□□□ 1.86
TRIM8-204ENST00000487927 CNKSR1Q969H4 720 aa26.63■■□□□ 1.85
TRIM8-204ENST00000487927 MASTLQ96GX5 879 aa26.63■■□□□ 1.85
TRIM8-204ENST00000487927 RRP7AQ9Y3A4 280 aaKnown RBP26.63■■□□□ 1.85
TRIM8-204ENST00000487927 TSPYL4Q9UJ04 414 aa26.62■■□□□ 1.85
TRIM8-204ENST00000487927 KLRG2A4D1S0 409 aaPredicted RBP26.61■■□□□ 1.85
TRIM8-204ENST00000487927 PRPF40BQ6NWY9 871 aaKnown RBP26.61■■□□□ 1.85
TRIM8-204ENST00000487927 TPTE2Q6XPS3 522 aa26.61■■□□□ 1.85
TRIM8-204ENST00000487927 TTLL7Q6ZT98 887 aa26.61■■□□□ 1.85
TRIM8-204ENST00000487927 RRAGCQ9HB90 399 aa26.61■■□□□ 1.85
TRIM8-204ENST00000487927 MAP3K15Q6ZN16 1313 aa26.61■■□□□ 1.85
TRIM8-204ENST00000487927 FAM177BA6PVY3 158 aa26.6■■□□□ 1.85
TRIM8-204ENST00000487927 ERVV-1B6SEH8 477 aa26.6■■□□□ 1.85
TRIM8-204ENST00000487927 MYL6BP14649 208 aa26.6■■□□□ 1.85
TRIM8-204ENST00000487927 CCDC146Q8IYE0 955 aa26.6■■□□□ 1.85
TRIM8-204ENST00000487927 RBM46Q8TBY0 533 aaKnown RBP26.59■■□□□ 1.85
TRIM8-204ENST00000487927 GLTPD2A6NH11 291 aa26.58■■□□□ 1.85
TRIM8-204ENST00000487927 CENPBP07199 599 aaPredicted RBP26.58■■□□□ 1.85
TRIM8-204ENST00000487927 BABAM1Q9NWV8 329 aa26.58■■□□□ 1.85
TRIM8-204ENST00000487927 ERBB4Q15303 1308 aa26.58■■□□□ 1.85
TRIM8-204ENST00000487927 LTBP3Q9NS15 1303 aa26.58■■□□□ 1.85
TRIM8-204ENST00000487927 LMOD3Q0VAK6 560 aa26.57■■□□□ 1.84
TRIM8-204ENST00000487927 LRP10Q7Z4F1 713 aa26.57■■□□□ 1.84
TRIM8-204ENST00000487927 C7orf43Q8WVR3 580 aa26.57■■□□□ 1.84
TRIM8-204ENST00000487927 NPR1P16066 1061 aa26.56■■□□□ 1.84
TRIM8-204ENST00000487927 PDIA6Q15084 440 aa26.56■■□□□ 1.84
TRIM8-204ENST00000487927 KIF6Q6ZMV9 814 aa26.56■■□□□ 1.84
TRIM8-204ENST00000487927 C16orf71Q8IYS4 520 aaPredicted RBP26.56■■□□□ 1.84
TRIM8-204ENST00000487927 ABCC12Q96J65 1359 aa26.56■■□□□ 1.84
TRIM8-204ENST00000487927 NEUROD2Q15784 382 aa26.55■■□□□ 1.84
TRIM8-204ENST00000487927 RUNDC1Q96C34 613 aa26.55■■□□□ 1.84
TRIM8-204ENST00000487927 TAOK3Q9H2K8 898 aa26.55■■□□□ 1.84
TRIM8-204ENST00000487927 ZBTB3Q9H5J0 574 aa26.55■■□□□ 1.84
TRIM8-204ENST00000487927 PRKRIP1Q9H875 184 aaPredicted RBP26.55■■□□□ 1.84
TRIM8-204ENST00000487927 WDR43Q15061 677 aaKnown RBP eCLIP26.54■■□□□ 1.84
TRIM8-204ENST00000487927 ADAMTS8Q9UP79 889 aa26.54■■□□□ 1.84
TRIM8-204ENST00000487927 TRIM35Q9UPQ4 493 aa26.54■■□□□ 1.84
TRIM8-204ENST00000487927 UBN2Q6ZU65 1347 aa26.54■■□□□ 1.84
TRIM8-204ENST00000487927 WDR90Q96KV7 1748 aa26.53■■□□□ 1.84
TRIM8-204ENST00000487927 EIF2S2P20042 333 aaKnown RBP26.53■■□□□ 1.84
TRIM8-204ENST00000487927 APLP1P51693 650 aa26.53■■□□□ 1.84
TRIM8-204ENST00000487927 NUTM1Q86Y26 1132 aa26.53■■□□□ 1.84
TRIM8-204ENST00000487927 PROSER3Q2NL68 480 aa26.52■■□□□ 1.84
TRIM8-204ENST00000487927 SOGA3Q5TF21 947 aa26.52■■□□□ 1.84
TRIM8-204ENST00000487927 IBTKQ9P2D0 1353 aaPredicted RBP26.51■■□□□ 1.83
TRIM8-204ENST00000487927 GPTP24298 496 aa26.51■■□□□ 1.83
TRIM8-204ENST00000487927 GTF2E1P29083 439 aaPredicted RBP26.51■■□□□ 1.83
TRIM8-204ENST00000487927 ERFEQ4G0M1 354 aa26.51■■□□□ 1.83
TRIM8-204ENST00000487927 GIGYF2Q6Y7W6 1299 aaKnown RBP26.51■■□□□ 1.83
TRIM8-204ENST00000487927 ZNF34Q8IZ26 560 aa26.51■■□□□ 1.83
TRIM8-204ENST00000487927 NYXQ9GZU5 481 aa26.51■■□□□ 1.83
TRIM8-204ENST00000487927 POTECB2RU33 542 aa26.5■■□□□ 1.83
TRIM8-204ENST00000487927 CHL1O00533 1208 aa26.5■■□□□ 1.83
TRIM8-204ENST00000487927 ANXA1P04083 346 aa26.5■■□□□ 1.83
TRIM8-204ENST00000487927 FSTL1Q12841 308 aa26.5■■□□□ 1.83
TRIM8-204ENST00000487927 OLFM4Q6UX06 510 aa26.5■■□□□ 1.83
TRIM8-204ENST00000487927 RIC1Q4ADV7 1423 aa26.49■■□□□ 1.83
TRIM8-204ENST00000487927 ANKRD36CQ5JPF3 1778 aa26.49■■□□□ 1.83
TRIM8-204ENST00000487927 CRY2Q49AN0 593 aa26.49■■□□□ 1.83
TRIM8-204ENST00000487927 CCDC93Q567U6 631 aa26.49■■□□□ 1.83
TRIM8-204ENST00000487927 SUSD4Q5VX71 490 aa26.49■■□□□ 1.83
TRIM8-204ENST00000487927 VEGFAP15692 232 aaPredicted RBP26.48■■□□□ 1.83
TRIM8-204ENST00000487927 KRT24Q2M2I5 525 aa26.48■■□□□ 1.83
TRIM8-204ENST00000487927 NTSR2O95665 410 aa26.47■■□□□ 1.83
TRIM8-204ENST00000487927 DPY19L2Q6NUT2 758 aa26.46■■□□□ 1.83
TRIM8-204ENST00000487927 NECTIN2Q92692 538 aa26.46■■□□□ 1.83
TRIM8-204ENST00000487927 SNED1Q8TER0 1413 aa26.46■■□□□ 1.83
TRIM8-204ENST00000487927 ALDH1B1P30837 517 aa26.45■■□□□ 1.82
TRIM8-204ENST00000487927 FKBP4Q02790 459 aaKnown RBP eCLIP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms