RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 UBAP2LQ14157 1087 aaKnown RBP9.82□□□□□ -0.84
USP48-209ENST00000487880 C11orf91Q3C1V1 193 aa9.82□□□□□ -0.84
USP48-209ENST00000487880 BICDL1Q6ZP65 573 aa9.82□□□□□ -0.84
USP48-209ENST00000487880 NLRP8Q86W28 1048 aa9.82□□□□□ -0.84
USP48-209ENST00000487880 PGBD3Q8N328 593 aa9.82□□□□□ -0.84
USP48-209ENST00000487880 SUSD3Q96L08 255 aa9.82□□□□□ -0.84
USP48-209ENST00000487880 KLK14Q9P0G3 267 aa9.82□□□□□ -0.84
USP48-209ENST00000487880 NPR3P17342 541 aa9.81□□□□□ -0.84
USP48-209ENST00000487880 DBN1Q16643 649 aa9.81□□□□□ -0.84
USP48-209ENST00000487880 HIF1AQ16665 826 aa9.81□□□□□ -0.84
USP48-209ENST00000487880 IER5Q5VY09 327 aa9.81□□□□□ -0.84
USP48-209ENST00000487880 RIPOR1Q6ZS17 1223 aa9.81□□□□□ -0.84
USP48-209ENST00000487880 ZNF280CQ8ND82 737 aa9.81□□□□□ -0.84
USP48-209ENST00000487880 ZNF837Q96EG3 531 aaPredicted RBP9.81□□□□□ -0.84
USP48-209ENST00000487880 GMCL1Q96IK5 515 aa9.81□□□□□ -0.84
USP48-209ENST00000487880 TGFBR3LH3BV60 316 aa9.8□□□□□ -0.84
USP48-209ENST00000487880 H7C1W4 665 aa9.8□□□□□ -0.84
USP48-209ENST00000487880 ICMTO60725 284 aa9.8□□□□□ -0.84
USP48-209ENST00000487880 ZNF211Q13398 564 aaPredicted RBP9.8□□□□□ -0.84
USP48-209ENST00000487880 SF3B2Q13435 895 aaKnown RBP9.8□□□□□ -0.84
USP48-209ENST00000487880 MTMR3Q13615 1198 aa9.8□□□□□ -0.84
USP48-209ENST00000487880 FAM26DQ5JW98 314 aa9.8□□□□□ -0.84
USP48-209ENST00000487880 SAMD5Q5TGI4 173 aa9.8□□□□□ -0.84
USP48-209ENST00000487880 NPAS3Q8IXF0 933 aa9.8□□□□□ -0.84
USP48-209ENST00000487880 HSH2DQ96JZ2 352 aa9.8□□□□□ -0.84
USP48-209ENST00000487880 STIM2Q9P246 746 aa9.8□□□□□ -0.84
USP48-209ENST00000487880 NXF1Q9UBU9 619 aaKnown RBP9.8□□□□□ -0.84
USP48-209ENST00000487880 DMGDHQ9UI17 866 aaKnown RBP9.8□□□□□ -0.84
USP48-209ENST00000487880 SOWAHDA6NJG2 315 aa9.79□□□□□ -0.84
USP48-209ENST00000487880 ABL1P00519 1130 aa9.79□□□□□ -0.84
USP48-209ENST00000487880 EFHC2Q5JST6 749 aa9.79□□□□□ -0.84
USP48-209ENST00000487880 LRRC69Q6ZNQ3 347 aa9.79□□□□□ -0.84
USP48-209ENST00000487880 NANOS1Q8WY41 292 aaKnown RBP9.79□□□□□ -0.84
USP48-209ENST00000487880 NUCKS1Q9H1E3 243 aaKnown RBP9.79□□□□□ -0.84
USP48-209ENST00000487880 ANKIB1Q9P2G1 1089 aa9.79□□□□□ -0.84
USP48-209ENST00000487880 BRD2P25440 801 aaKnown RBP9.78□□□□□ -0.84
USP48-209ENST00000487880 FKBP4Q02790 459 aaKnown RBP eCLIP9.78□□□□□ -0.84
USP48-209ENST00000487880 ECM1Q16610 540 aa9.78□□□□□ -0.84
USP48-209ENST00000487880 ETFBKMTQ8IXQ9 262 aa9.78□□□□□ -0.84
USP48-209ENST00000487880 IFT43Q96FT9 208 aa9.78□□□□□ -0.84
USP48-209ENST00000487880 H3BM21 787 aa9.77□□□□□ -0.85
USP48-209ENST00000487880 ANO2Q9NQ90 1003 aa9.77□□□□□ -0.85
USP48-209ENST00000487880 NDFIP2Q9NV92 336 aa9.77□□□□□ -0.85
USP48-209ENST00000487880 H3BRB1 525 aa9.76□□□□□ -0.85
USP48-209ENST00000487880 TRIM26Q12899 539 aaPredicted RBP9.76□□□□□ -0.85
USP48-209ENST00000487880 FIGNL1Q6PIW4 674 aa9.76□□□□□ -0.85
USP48-209ENST00000487880 BTLAQ7Z6A9 289 aa9.76□□□□□ -0.85
USP48-209ENST00000487880 ZCCHC2Q9C0B9 1178 aaKnown RBP9.76□□□□□ -0.85
USP48-209ENST00000487880 TUT1Q9H6E5 874 aaKnown RBP9.76□□□□□ -0.85
USP48-209ENST00000487880 ZBTB7CA1YPR0 619 aa9.75□□□□□ -0.85
USP48-209ENST00000487880 ZBTB39O15060 712 aa9.75□□□□□ -0.85
USP48-209ENST00000487880 FAM157BP0CG42 384 aa9.75□□□□□ -0.85
USP48-209ENST00000487880 VSIG8P0DPA2 414 aa9.75□□□□□ -0.85
USP48-209ENST00000487880 MPSTP25325 297 aa9.75□□□□□ -0.85
USP48-209ENST00000487880 TYRO3Q06418 890 aa9.75□□□□□ -0.85
USP48-209ENST00000487880 TREML4Q6UXN2 200 aa9.75□□□□□ -0.85
USP48-209ENST00000487880 ABTB2Q8N961 1025 aa9.75□□□□□ -0.85
USP48-209ENST00000487880 NEUROD4Q9HD90 331 aa9.75□□□□□ -0.85
USP48-209ENST00000487880 GJA3Q9Y6H8 435 aa9.75□□□□□ -0.85
USP48-209ENST00000487880 EFSO43281 561 aa9.74□□□□□ -0.85
USP48-209ENST00000487880 MICAL2O94851 1124 aa9.74□□□□□ -0.85
USP48-209ENST00000487880 FAM13AO94988 1023 aa9.74□□□□□ -0.85
USP48-209ENST00000487880 VEGFBP49765 207 aa9.74□□□□□ -0.85
USP48-209ENST00000487880 TREML1Q86YW5 311 aa9.74□□□□□ -0.85
USP48-209ENST00000487880 GLYCTKQ8IVS8 523 aa9.74□□□□□ -0.85
USP48-209ENST00000487880 PCDHGC4Q9Y5F7 938 aa9.74□□□□□ -0.85
USP48-209ENST00000487880 TERTO14746 1132 aaKnown RBP9.73□□□□□ -0.85
USP48-209ENST00000487880 INPP5BP32019 993 aa9.73□□□□□ -0.85
USP48-209ENST00000487880 ARHGAP4P98171 946 aa9.73□□□□□ -0.85
USP48-209ENST00000487880 SND1Q7KZF4 910 aaKnown RBP eCLIP9.73□□□□□ -0.85
USP48-209ENST00000487880 VWA5B2Q8N398 1253 aa9.73□□□□□ -0.85
USP48-209ENST00000487880 GTPBP3Q969Y2 492 aaKnown RBP9.73□□□□□ -0.85
USP48-209ENST00000487880 HCN2Q9UL51 889 aa9.73□□□□□ -0.85
USP48-209ENST00000487880 ATXN7O15265 892 aaPredicted RBP9.72□□□□□ -0.85
USP48-209ENST00000487880 BNIP3LO60238 219 aa9.72□□□□□ -0.85
USP48-209ENST00000487880 EIF1AXP47813 144 aaKnown RBP9.72□□□□□ -0.85
USP48-209ENST00000487880 SV2AQ7L0J3 742 aa9.72□□□□□ -0.85
USP48-209ENST00000487880 CDC14CA4D256 554 aa9.71□□□□□ -0.86
USP48-209ENST00000487880 OPLAHO14841 1288 aa9.71□□□□□ -0.86
USP48-209ENST00000487880 IDH3AP50213 366 aa9.71□□□□□ -0.86
USP48-209ENST00000487880 TNP2Q05952 138 aa9.71□□□□□ -0.86
USP48-209ENST00000487880 NOM1Q5C9Z4 860 aaKnown RBP9.71□□□□□ -0.86
USP48-209ENST00000487880 LCE2AQ5TA79 106 aaPredicted RBP9.71□□□□□ -0.86
USP48-209ENST00000487880 GRNP28799 593 aaKnown RBP9.7□□□□□ -0.86
USP48-209ENST00000487880 ZAP70P43403 619 aa9.7□□□□□ -0.86
USP48-209ENST00000487880 KCNQ4P56696 695 aa9.7□□□□□ -0.86
USP48-209ENST00000487880 ALKBH2Q6NS38 261 aa9.7□□□□□ -0.86
USP48-209ENST00000487880 ABHD17AQ96GS6 310 aa9.7□□□□□ -0.86
USP48-209ENST00000487880 CEP63Q96MT8 703 aa9.7□□□□□ -0.86
USP48-209ENST00000487880 GZF1Q9H116 711 aaPredicted RBP9.7□□□□□ -0.86
USP48-209ENST00000487880 ATXN7L1Q9ULK2 861 aaPredicted RBP9.7□□□□□ -0.86
USP48-209ENST00000487880 MAPTP10636 758 aaKnown RBP9.69□□□□□ -0.86
USP48-209ENST00000487880 ARSDP51689 593 aa9.69□□□□□ -0.86
USP48-209ENST00000487880 LAMC2Q13753 1193 aa9.69□□□□□ -0.86
USP48-209ENST00000487880 ATCAYQ86WG3 371 aa9.69□□□□□ -0.86
USP48-209ENST00000487880 CFHR5Q9BXR6 569 aa9.69□□□□□ -0.86
USP48-209ENST00000487880 BRD7Q9NPI1 651 aa9.69□□□□□ -0.86
USP48-209ENST00000487880 ERBB4Q15303 1308 aa9.68□□□□□ -0.86
USP48-209ENST00000487880 DCDC2BA2VCK2 349 aa9.68□□□□□ -0.86
USP48-209ENST00000487880 FZD6O60353 706 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms