RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 PRPF40BQ6NWY9 871 aaKnown RBP8.3□□□□□ -1.08
COL4A3-206ENST00000487633 BEGAINQ9BUH8 593 aa8.3□□□□□ -1.08
COL4A3-206ENST00000487633 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.3□□□□□ -1.08
COL4A3-206ENST00000487633 POLR2AP24928 1970 aaKnown RBP8.3□□□□□ -1.08
COL4A3-206ENST00000487633 FXR1P51114 621 aaKnown RBP eCLIP8.29□□□□□ -1.08
COL4A3-206ENST00000487633 CABP4P57796 275 aa8.29□□□□□ -1.08
COL4A3-206ENST00000487633 SAPCD2Q86UD0 394 aa8.29□□□□□ -1.08
COL4A3-206ENST00000487633 CARD14Q9BXL6 1004 aa8.29□□□□□ -1.08
COL4A3-206ENST00000487633 SNED1Q8TER0 1413 aa8.29□□□□□ -1.08
COL4A3-206ENST00000487633 FZD9O00144 591 aa8.28□□□□□ -1.08
COL4A3-206ENST00000487633 MAP2K2P36507 400 aa8.28□□□□□ -1.08
COL4A3-206ENST00000487633 ECE1P42892 770 aa8.28□□□□□ -1.08
COL4A3-206ENST00000487633 SCNN1DP51172 638 aa8.28□□□□□ -1.08
COL4A3-206ENST00000487633 EIF4A2Q14240 407 aaKnown RBP8.28□□□□□ -1.08
COL4A3-206ENST00000487633 AKAP11Q9UKA4 1901 aa8.28□□□□□ -1.08
COL4A3-206ENST00000487633 WASHC2AQ641Q2 1341 aa8.28□□□□□ -1.08
COL4A3-206ENST00000487633 CENPFP49454 3210 aa8.27□□□□□ -1.09
COL4A3-206ENST00000487633 SRGNP10124 158 aa8.27□□□□□ -1.09
COL4A3-206ENST00000487633 AEBP1Q8IUX7 1158 aa8.27□□□□□ -1.09
COL4A3-206ENST00000487633 CARD11Q9BXL7 1154 aa8.27□□□□□ -1.09
COL4A3-206ENST00000487633 GLIS2Q9BZE0 524 aaPredicted RBP8.27□□□□□ -1.09
COL4A3-206ENST00000487633 UBR2Q8IWV8 1755 aa8.27□□□□□ -1.09
COL4A3-206ENST00000487633 KIF24Q5T7B8 1368 aa8.26□□□□□ -1.09
COL4A3-206ENST00000487633 CANXP27824 592 aaKnown RBP8.26□□□□□ -1.09
COL4A3-206ENST00000487633 BRPF1P55201 1214 aaPredicted RBP8.26□□□□□ -1.09
COL4A3-206ENST00000487633 NEUROD1Q13562 356 aa8.26□□□□□ -1.09
COL4A3-206ENST00000487633 ZNF530Q6P9A1 599 aaPredicted RBP8.26□□□□□ -1.09
COL4A3-206ENST00000487633 PNMA8AQ86V59 439 aaPredicted RBP8.26□□□□□ -1.09
COL4A3-206ENST00000487633 BRIP1Q9BX63 1249 aa8.26□□□□□ -1.09
COL4A3-206ENST00000487633 LGR6Q9HBX8 967 aa8.26□□□□□ -1.09
COL4A3-206ENST00000487633 POLKQ9UBT6 870 aa8.26□□□□□ -1.09
COL4A3-206ENST00000487633 GJA3Q9Y6H8 435 aa8.26□□□□□ -1.09
COL4A3-206ENST00000487633 COL6A3P12111 3177 aa8.25□□□□□ -1.09
COL4A3-206ENST00000487633 ST20-MTHFSA0A0A6YYL1 179 aa8.25□□□□□ -1.09
COL4A3-206ENST00000487633 SHTN1A0MZ66 631 aa8.25□□□□□ -1.09
COL4A3-206ENST00000487633 FAM155AB1AL88 458 aaPredicted RBP8.25□□□□□ -1.09
COL4A3-206ENST00000487633 CELF2O95319 508 aaKnown RBP8.25□□□□□ -1.09
COL4A3-206ENST00000487633 FKBP4Q02790 459 aaKnown RBP eCLIP8.25□□□□□ -1.09
COL4A3-206ENST00000487633 SYNE4Q8N205 404 aa8.25□□□□□ -1.09
COL4A3-206ENST00000487633 PUS7Q96PZ0 661 aaKnown RBP8.25□□□□□ -1.09
COL4A3-206ENST00000487633 TBC1D2BQ9UPU7 963 aa8.25□□□□□ -1.09
COL4A3-206ENST00000487633 HPS5Q9UPZ3 1129 aa8.25□□□□□ -1.09
COL4A3-206ENST00000487633 HTTP42858 3142 aa8.24□□□□□ -1.09
COL4A3-206ENST00000487633 PDE6BP35913 854 aa8.24□□□□□ -1.09
COL4A3-206ENST00000487633 IARSP41252 1262 aaKnown RBP8.24□□□□□ -1.09
COL4A3-206ENST00000487633 MTHFSP49914 203 aa8.24□□□□□ -1.09
COL4A3-206ENST00000487633 EIF5P55010 431 aaKnown RBP8.24□□□□□ -1.09
COL4A3-206ENST00000487633 STYK1Q6J9G0 422 aa8.24□□□□□ -1.09
COL4A3-206ENST00000487633 ZNF408Q9H9D4 720 aa8.24□□□□□ -1.09
COL4A3-206ENST00000487633 PAPPA2Q9BXP8 1791 aa8.24□□□□□ -1.09
COL4A3-206ENST00000487633 DLL1O00548 723 aa8.23□□□□□ -1.09
COL4A3-206ENST00000487633 HIRAP54198 1017 aaPredicted RBP8.23□□□□□ -1.09
COL4A3-206ENST00000487633 GPC2Q8N158 579 aa8.23□□□□□ -1.09
COL4A3-206ENST00000487633 CNKSR1Q969H4 720 aa8.23□□□□□ -1.09
COL4A3-206ENST00000487633 MASTLQ96GX5 879 aa8.23□□□□□ -1.09
COL4A3-206ENST00000487633 RNF186Q9NXI6 227 aa8.23□□□□□ -1.09
COL4A3-206ENST00000487633 CA12O43570 354 aa8.22□□□□□ -1.09
COL4A3-206ENST00000487633 TRPA1O75762 1119 aa8.22□□□□□ -1.09
COL4A3-206ENST00000487633 PIP4K2AP48426 406 aaPredicted RBP8.22□□□□□ -1.09
COL4A3-206ENST00000487633 CCDC93Q567U6 631 aa8.22□□□□□ -1.09
COL4A3-206ENST00000487633 MRC1P22897 1456 aa8.21□□□□□ -1.09
COL4A3-206ENST00000487633 TNNT2P45379 298 aaPredicted RBP8.21□□□□□ -1.1
COL4A3-206ENST00000487633 KIF23Q02241 960 aaPredicted RBP8.21□□□□□ -1.1
COL4A3-206ENST00000487633 POTEFA5A3E0 1075 aa8.2□□□□□ -1.1
COL4A3-206ENST00000487633 CAMTA2O94983 1202 aa8.2□□□□□ -1.1
COL4A3-206ENST00000487633 PLEKHO1Q53GL0 409 aaPredicted RBP8.2□□□□□ -1.1
COL4A3-206ENST00000487633 CTU1Q7Z7A3 348 aaKnown RBP8.2□□□□□ -1.1
COL4A3-206ENST00000487633 CNBD1Q8NA66 436 aa8.2□□□□□ -1.1
COL4A3-206ENST00000487633 TRPM4Q8TD43 1214 aa8.2□□□□□ -1.1
COL4A3-206ENST00000487633 SLC52A2Q9HAB3 445 aa8.2□□□□□ -1.1
COL4A3-206ENST00000487633 ZNF330Q9Y3S2 320 aaPredicted RBP8.2□□□□□ -1.1
COL4A3-206ENST00000487633 TRIOBPQ9H2D6 2365 aa8.2□□□□□ -1.1
COL4A3-206ENST00000487633 A0A0C4DFX4 3053 aa8.2□□□□□ -1.1
COL4A3-206ENST00000487633 HSP90AB1P08238 724 aaKnown RBP8.19□□□□□ -1.1
COL4A3-206ENST00000487633 USP50Q70EL3 339 aaPredicted RBP8.19□□□□□ -1.1
COL4A3-206ENST00000487633 HHIPL1Q96JK4 782 aa8.19□□□□□ -1.1
COL4A3-206ENST00000487633 COLQQ9Y215 455 aaPredicted RBP8.19□□□□□ -1.1
COL4A3-206ENST00000487633 SIPA1L3O60292 1781 aaPredicted RBP8.19□□□□□ -1.1
COL4A3-206ENST00000487633 TAF1P21675 1872 aa8.18□□□□□ -1.1
COL4A3-206ENST00000487633 KLRG2A4D1S0 409 aaPredicted RBP8.18□□□□□ -1.1
COL4A3-206ENST00000487633 FAM177BA6PVY3 158 aa8.18□□□□□ -1.1
COL4A3-206ENST00000487633 A1BGP04217 495 aa8.18□□□□□ -1.1
COL4A3-206ENST00000487633 HUNKP57058 714 aa8.18□□□□□ -1.1
COL4A3-206ENST00000487633 NOGQ13253 232 aa8.18□□□□□ -1.1
COL4A3-206ENST00000487633 NBPF15Q8N660 670 aa8.18□□□□□ -1.1
COL4A3-206ENST00000487633 CSRNP1Q96S65 589 aa8.18□□□□□ -1.1
COL4A3-206ENST00000487633 GPRC5DQ9NZD1 345 aa8.18□□□□□ -1.1
COL4A3-206ENST00000487633 PRAMEF22A3QJZ6 481 aa8.17□□□□□ -1.1
COL4A3-206ENST00000487633 RNMTO43148 476 aaKnown RBP8.17□□□□□ -1.1
COL4A3-206ENST00000487633 EGFRP00533 1210 aa8.17□□□□□ -1.1
COL4A3-206ENST00000487633 NPR1P16066 1061 aa8.17□□□□□ -1.1
COL4A3-206ENST00000487633 LMOD1P29536 600 aaPredicted RBP8.17□□□□□ -1.1
COL4A3-206ENST00000487633 SOGA3Q5TF21 947 aa8.17□□□□□ -1.1
COL4A3-206ENST00000487633 USP48Q86UV5 1035 aa8.17□□□□□ -1.1
COL4A3-206ENST00000487633 GCC1Q96CN9 775 aa8.17□□□□□ -1.1
COL4A3-206ENST00000487633 SETDB2Q96T68 719 aa8.17□□□□□ -1.1
COL4A3-206ENST00000487633 R3HDMLQ9H3Y0 253 aa8.17□□□□□ -1.1
COL4A3-206ENST00000487633 PGAP2Q9UHJ9 254 aa8.17□□□□□ -1.1
COL4A3-206ENST00000487633 PDZRN3Q9UPQ7 1066 aa8.17□□□□□ -1.1
COL4A3-206ENST00000487633 RANBP2P49792 3224 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms