RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 FAM177BA6PVY3 158 aa16.37■□□□□ 0.21
SREBF1-215ENST00000487401 GTF2E1P29083 439 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-215ENST00000487401 LMOD3Q0VAK6 560 aa16.37■□□□□ 0.21
SREBF1-215ENST00000487401 MASTLQ96GX5 879 aa16.37■□□□□ 0.21
SREBF1-215ENST00000487401 RRAGCQ9HB90 399 aa16.37■□□□□ 0.21
SREBF1-215ENST00000487401 NFKBIEO00221 500 aa16.36■□□□□ 0.21
SREBF1-215ENST00000487401 SRGNP10124 158 aa16.36■□□□□ 0.21
SREBF1-215ENST00000487401 HLFQ16534 295 aa16.36■□□□□ 0.21
SREBF1-215ENST00000487401 KIF6Q6ZMV9 814 aa16.36■□□□□ 0.21
SREBF1-215ENST00000487401 ZC3H4Q9UPT8 1303 aaKnown RBP16.36■□□□□ 0.21
SREBF1-215ENST00000487401 ERVV-1B6SEH8 477 aa16.35■□□□□ 0.21
SREBF1-215ENST00000487401 MYL6BP14649 208 aa16.35■□□□□ 0.21
SREBF1-215ENST00000487401 TMPOP42166 694 aaKnown RBP16.35■□□□□ 0.21
SREBF1-215ENST00000487401 WDR43Q15061 677 aaKnown RBP eCLIP16.35■□□□□ 0.21
SREBF1-215ENST00000487401 SOGA3Q5TF21 947 aa16.35■□□□□ 0.21
SREBF1-215ENST00000487401 RBM46Q8TBY0 533 aaKnown RBP16.35■□□□□ 0.21
SREBF1-215ENST00000487401 NPR1P16066 1061 aa16.34■□□□□ 0.21
SREBF1-215ENST00000487401 PRELPP51888 382 aa16.34■□□□□ 0.21
SREBF1-215ENST00000487401 PRPF40BQ6NWY9 871 aaKnown RBP16.34■□□□□ 0.21
SREBF1-215ENST00000487401 BABAM1Q9NWV8 329 aa16.34■□□□□ 0.21
SREBF1-215ENST00000487401 GLTPD2A6NH11 291 aa16.33■□□□□ 0.2
SREBF1-215ENST00000487401 APLP1P51693 650 aa16.33■□□□□ 0.2
SREBF1-215ENST00000487401 NEUROD2Q15784 382 aa16.33■□□□□ 0.2
SREBF1-215ENST00000487401 CCDC146Q8IYE0 955 aa16.33■□□□□ 0.2
SREBF1-215ENST00000487401 NYXQ9GZU5 481 aa16.33■□□□□ 0.2
SREBF1-215ENST00000487401 MAP3K15Q6ZN16 1313 aa16.33■□□□□ 0.2
SREBF1-215ENST00000487401 SIPA1L3O60292 1781 aaPredicted RBP16.33■□□□□ 0.2
SREBF1-215ENST00000487401 EIF2S2P20042 333 aaKnown RBP16.32■□□□□ 0.2
SREBF1-215ENST00000487401 ERFEQ4G0M1 354 aa16.32■□□□□ 0.2
SREBF1-215ENST00000487401 DPY19L2Q6NUT2 758 aa16.32■□□□□ 0.2
SREBF1-215ENST00000487401 TTLL7Q6ZT98 887 aa16.32■□□□□ 0.2
SREBF1-215ENST00000487401 RUNDC1Q96C34 613 aa16.32■□□□□ 0.2
SREBF1-215ENST00000487401 TAOK3Q9H2K8 898 aa16.32■□□□□ 0.2
SREBF1-215ENST00000487401 NRXN2Q9P2S2 1712 aa16.31■□□□□ 0.2
SREBF1-215ENST00000487401 ERBB4Q15303 1308 aa16.31■□□□□ 0.2
SREBF1-215ENST00000487401 KLRG2A4D1S0 409 aaPredicted RBP16.31■□□□□ 0.2
SREBF1-215ENST00000487401 FSTL1Q12841 308 aa16.31■□□□□ 0.2
SREBF1-215ENST00000487401 ZBTB3Q9H5J0 574 aa16.31■□□□□ 0.2
SREBF1-215ENST00000487401 VEGFAP15692 232 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-215ENST00000487401 GPTP24298 496 aa16.3■□□□□ 0.2
SREBF1-215ENST00000487401 ALDH1B1P30837 517 aa16.3■□□□□ 0.2
SREBF1-215ENST00000487401 LAS1LQ9Y4W2 734 aaKnown RBP16.3■□□□□ 0.2
SREBF1-215ENST00000487401 LTBP3Q9NS15 1303 aa16.29■□□□□ 0.2
SREBF1-215ENST00000487401 CCDC93Q567U6 631 aa16.29■□□□□ 0.2
SREBF1-215ENST00000487401 ADAMTS8Q9UP79 889 aa16.29■□□□□ 0.2
SREBF1-215ENST00000487401 SCN7AQ01118 1682 aa16.29■□□□□ 0.2
SREBF1-215ENST00000487401 CEP350Q5VT06 3117 aa16.29■□□□□ 0.2
SREBF1-215ENST00000487401 NUTM1Q86Y26 1132 aa16.28■□□□□ 0.2
SREBF1-215ENST00000487401 SMC1BQ8NDV3 1235 aa16.28■□□□□ 0.2
SREBF1-215ENST00000487401 C7orf43Q8WVR3 580 aa16.28■□□□□ 0.2
SREBF1-215ENST00000487401 GIGYF2Q6Y7W6 1299 aaKnown RBP16.27■□□□□ 0.2
SREBF1-215ENST00000487401 RTKN2Q8IZC4 609 aa16.27■□□□□ 0.2
SREBF1-215ENST00000487401 NECTIN2Q92692 538 aa16.27■□□□□ 0.2
SREBF1-215ENST00000487401 PRKRIP1Q9H875 184 aaPredicted RBP16.27■□□□□ 0.2
SREBF1-215ENST00000487401 BRCA1P38398 1863 aaKnown RBP16.27■□□□□ 0.19
SREBF1-215ENST00000487401 CHL1O00533 1208 aa16.26■□□□□ 0.19
SREBF1-215ENST00000487401 PDIA6Q15084 440 aa16.26■□□□□ 0.19
SREBF1-215ENST00000487401 SUSD4Q5VX71 490 aa16.26■□□□□ 0.19
SREBF1-215ENST00000487401 PPP1R42Q7Z4L9 355 aa16.26■□□□□ 0.19
SREBF1-215ENST00000487401 ZNF34Q8IZ26 560 aa16.26■□□□□ 0.19
SREBF1-215ENST00000487401 RPGRQ92834 1020 aaKnown RBP16.26■□□□□ 0.19
SREBF1-215ENST00000487401 TRIM35Q9UPQ4 493 aa16.26■□□□□ 0.19
SREBF1-215ENST00000487401 AFDNP55196 1824 aaKnown RBP16.26■□□□□ 0.19
SREBF1-215ENST00000487401 VIRMAQ69YN4 1812 aaKnown RBP16.26■□□□□ 0.19
SREBF1-215ENST00000487401 ARFGEF1Q9Y6D6 1849 aa16.26■□□□□ 0.19
SREBF1-215ENST00000487401 FKBP4Q02790 459 aaKnown RBP eCLIP16.25■□□□□ 0.19
SREBF1-215ENST00000487401 PARP10Q53GL7 1025 aa16.25■□□□□ 0.19
SREBF1-215ENST00000487401 ANXA1P04083 346 aa16.24■□□□□ 0.19
SREBF1-215ENST00000487401 AIMP1Q12904 312 aaKnown RBP16.24■□□□□ 0.19
SREBF1-215ENST00000487401 PROSER3Q2NL68 480 aa16.24■□□□□ 0.19
SREBF1-215ENST00000487401 ZNF277Q9NRM2 450 aaPredicted RBP16.24■□□□□ 0.19
SREBF1-215ENST00000487401 UBN2Q6ZU65 1347 aa16.23■□□□□ 0.19
SREBF1-215ENST00000487401 CRY2Q49AN0 593 aa16.23■□□□□ 0.19
SREBF1-215ENST00000487401 HSP90AB3PQ58FF7 597 aa16.23■□□□□ 0.19
SREBF1-215ENST00000487401 OLFM4Q6UX06 510 aa16.23■□□□□ 0.19
SREBF1-215ENST00000487401 COPS6Q7L5N1 327 aa16.23■□□□□ 0.19
SREBF1-215ENST00000487401 LRP10Q7Z4F1 713 aa16.23■□□□□ 0.19
SREBF1-215ENST00000487401 XAGE3Q8WTP9 111 aa16.23■□□□□ 0.19
SREBF1-215ENST00000487401 RBM17Q96I25 401 aaKnown RBP16.23■□□□□ 0.19
SREBF1-215ENST00000487401 UTP14AQ9BVJ6 771 aaKnown RBP16.23■□□□□ 0.19
SREBF1-215ENST00000487401 ABCC12Q96J65 1359 aa16.23■□□□□ 0.19
SREBF1-215ENST00000487401 DDNO94850 711 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-215ENST00000487401 NTSR2O95665 410 aa16.22■□□□□ 0.19
SREBF1-215ENST00000487401 HOXA10P31260 410 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-215ENST00000487401 KRT24Q2M2I5 525 aa16.22■□□□□ 0.19
SREBF1-215ENST00000487401 CC2D2BQ6DHV5 1058 aa16.22■□□□□ 0.19
SREBF1-215ENST00000487401 SYNE4Q8N205 404 aa16.22■□□□□ 0.19
SREBF1-215ENST00000487401 DNAJC5GQ8N7S2 189 aa16.22■□□□□ 0.19
SREBF1-215ENST00000487401 NLRP3Q96P20 1036 aa16.22■□□□□ 0.19
SREBF1-215ENST00000487401 DDX21Q9NR30 783 aaKnown RBP eCLIP16.22■□□□□ 0.19
SREBF1-215ENST00000487401 IBTKQ9P2D0 1353 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-215ENST00000487401 POTECB2RU33 542 aa16.21■□□□□ 0.19
SREBF1-215ENST00000487401 TMX4Q9H1E5 349 aaPredicted RBP16.21■□□□□ 0.19
SREBF1-215ENST00000487401 HTRA3P83110 453 aa16.2■□□□□ 0.18
SREBF1-215ENST00000487401 HDGFL1Q5TGJ6 251 aa16.2■□□□□ 0.18
SREBF1-215ENST00000487401 CFAP44Q96MT7 982 aa16.2■□□□□ 0.18
SREBF1-215ENST00000487401 CRAMP1Q96RY5 1269 aa16.2■□□□□ 0.18
SREBF1-215ENST00000487401 BCORQ6W2J9 1755 aa16.19■□□□□ 0.18
SREBF1-215ENST00000487401 IQCA1LA6NCM1 817 aa16.19■□□□□ 0.18
SREBF1-215ENST00000487401 APAF1O14727 1248 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms