RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 IFT172Q9UG01 1749 aa7.13□□□□□ -1.27
SF1-217ENST00000486960 LMO7Q8WWI1 1683 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 CNTNAP1P78357 1384 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 U2SURPO15042 1029 aaKnown RBP7.12□□□□□ -1.27
SF1-217ENST00000486960 GPR37O15354 613 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 ANP32CO43423 234 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 MYBPC2Q14324 1141 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 SDE2Q6IQ49 451 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 GIGYF2Q6Y7W6 1299 aaKnown RBP7.12□□□□□ -1.27
SF1-217ENST00000486960 SMC1BQ8NDV3 1235 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 ZCRB1Q8TBF4 217 aaKnown RBP7.12□□□□□ -1.27
SF1-217ENST00000486960 SP7Q8TDD2 431 aaPredicted RBP7.12□□□□□ -1.27
SF1-217ENST00000486960 EVI5LQ96CN4 794 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 SPACA7Q96KW9 195 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 LARP6Q9BRS8 491 aaKnown RBP7.12□□□□□ -1.27
SF1-217ENST00000486960 LNPKQ9C0E8 428 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 RRAGCQ9HB90 399 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 GDPD2Q9HCC8 539 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 SNRKQ9NRH2 765 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 STRN4Q9NRL3 753 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 CHPF2Q9P2E5 772 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 PNMA2Q9UL42 364 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 PIK3C2AO00443 1686 aa7.12□□□□□ -1.27
SF1-217ENST00000486960 SSH2Q76I76 1423 aa7.11□□□□□ -1.27
SF1-217ENST00000486960 IGSF1Q8N6C5 1336 aa7.11□□□□□ -1.27
SF1-217ENST00000486960 TMEM88BA6NKF7 163 aa7.11□□□□□ -1.27
SF1-217ENST00000486960 POM121CA8CG34 1229 aa7.11□□□□□ -1.27
SF1-217ENST00000486960 CCER2I3L3R5 266 aa7.11□□□□□ -1.27
SF1-217ENST00000486960 PHF14O94880 888 aa7.11□□□□□ -1.27
SF1-217ENST00000486960 PAX3P23760 479 aa7.11□□□□□ -1.27
SF1-217ENST00000486960 ERCC5P28715 1186 aaPredicted RBP7.11□□□□□ -1.27
SF1-217ENST00000486960 HDGFP51858 240 aaKnown RBP7.11□□□□□ -1.27
SF1-217ENST00000486960 PSME1Q06323 249 aa7.11□□□□□ -1.27
SF1-217ENST00000486960 TSHZ1Q6ZSZ6 1077 aa7.11□□□□□ -1.27
SF1-217ENST00000486960 PNISRQ8TF01 805 aaKnown RBP7.11□□□□□ -1.27
SF1-217ENST00000486960 MCOLN1Q9GZU1 580 aa7.11□□□□□ -1.27
SF1-217ENST00000486960 PRM3Q9NNZ6 103 aa7.11□□□□□ -1.27
SF1-217ENST00000486960 LRRC4BQ9NT99 713 aa7.11□□□□□ -1.27
SF1-217ENST00000486960 NOP58Q9Y2X3 529 aaKnown RBP7.11□□□□□ -1.27
SF1-217ENST00000486960 COMMD10Q9Y6G5 202 aa7.11□□□□□ -1.27
SF1-217ENST00000486960 THSD7BQ9C0I4 1608 aa7.11□□□□□ -1.27
SF1-217ENST00000486960 NAIPQ13075 1403 aa7.1□□□□□ -1.27
SF1-217ENST00000486960 SBNO1A3KN83 1393 aa7.1□□□□□ -1.27
SF1-217ENST00000486960 FAM193AP78312 1265 aa7.1□□□□□ -1.27
SF1-217ENST00000486960 CHRNA2Q15822 529 aa7.1□□□□□ -1.27
SF1-217ENST00000486960 CFAP70Q5T0N1 1121 aa7.1□□□□□ -1.27
SF1-217ENST00000486960 ERICH6BQ5W0A0 696 aa7.1□□□□□ -1.27
SF1-217ENST00000486960 CLEC4GQ6UXB4 293 aa7.1□□□□□ -1.27
SF1-217ENST00000486960 RINLQ6ZS11 566 aa7.1□□□□□ -1.27
SF1-217ENST00000486960 NPAS4Q8IUM7 802 aa7.1□□□□□ -1.27
SF1-217ENST00000486960 OXER1Q8TDS5 423 aa7.1□□□□□ -1.27
SF1-217ENST00000486960 SLC16A10Q8TF71 515 aa7.1□□□□□ -1.27
SF1-217ENST00000486960 AIDAQ96BJ3 306 aa7.1□□□□□ -1.27
SF1-217ENST00000486960 TANGO6Q9C0B7 1094 aa7.1□□□□□ -1.27
SF1-217ENST00000486960 JADE2Q9NQC1 790 aa7.1□□□□□ -1.27
SF1-217ENST00000486960 LAMB4A4D0S4 1761 aa7.1□□□□□ -1.27
SF1-217ENST00000486960 CEP290O15078 2479 aa7.09□□□□□ -1.27
SF1-217ENST00000486960 KAT6BQ8WYB5 2073 aa7.09□□□□□ -1.27
SF1-217ENST00000486960 EXOC5O00471 708 aa7.09□□□□□ -1.27
SF1-217ENST00000486960 PDE4AP27815 886 aa7.09□□□□□ -1.27
SF1-217ENST00000486960 ABL2P42684 1182 aa7.09□□□□□ -1.27
SF1-217ENST00000486960 VEGFBP49765 207 aa7.09□□□□□ -1.27
SF1-217ENST00000486960 CLCN6P51797 869 aa7.09□□□□□ -1.27
SF1-217ENST00000486960 PDAP1Q13442 181 aaKnown RBP7.09□□□□□ -1.27
SF1-217ENST00000486960 ZNF467Q7Z7K2 595 aaPredicted RBP7.09□□□□□ -1.27
SF1-217ENST00000486960 PROCA1Q8NCQ7 364 aaPredicted RBP7.09□□□□□ -1.27
SF1-217ENST00000486960 PHF12Q96QT6 1004 aa7.09□□□□□ -1.27
SF1-217ENST00000486960 BRINP2Q9C0B6 783 aa7.09□□□□□ -1.27
SF1-217ENST00000486960 E9PCH4 1651 aa7.09□□□□□ -1.27
SF1-217ENST00000486960 ERBINQ96RT1 1412 aa7.09□□□□□ -1.28
SF1-217ENST00000486960 ARHGEF10O15013 1369 aa7.08□□□□□ -1.28
SF1-217ENST00000486960 MUC3AQ02505 3323 aa7.08□□□□□ -1.28
SF1-217ENST00000486960 PYGBP11216 843 aa7.08□□□□□ -1.28
SF1-217ENST00000486960 LARP1Q6PKG0 1096 aaKnown RBP7.08□□□□□ -1.28
SF1-217ENST00000486960 ZNF579Q8NAF0 562 aaKnown RBP7.08□□□□□ -1.28
SF1-217ENST00000486960 CCDC85AQ96PX6 553 aaPredicted RBP7.08□□□□□ -1.28
SF1-217ENST00000486960 RPS6KL1Q9Y6S9 549 aa7.08□□□□□ -1.28
SF1-217ENST00000486960 LAMA2P24043 3122 aaKnown RBP7.08□□□□□ -1.28
SF1-217ENST00000486960 KIF13BQ9NQT8 1826 aa7.08□□□□□ -1.28
SF1-217ENST00000486960 ARFGEF1Q9Y6D6 1849 aa7.08□□□□□ -1.28
SF1-217ENST00000486960 KIAA0232Q92628 1395 aa7.08□□□□□ -1.28
SF1-217ENST00000486960 KIF15Q9NS87 1388 aa7.08□□□□□ -1.28
SF1-217ENST00000486960 USP54Q70EL1 1684 aa7.07□□□□□ -1.28
SF1-217ENST00000486960 NRXN1Q9ULB1 1477 aa7.07□□□□□ -1.28
SF1-217ENST00000486960 WDHD1O75717 1129 aaPredicted RBP7.07□□□□□ -1.28
SF1-217ENST00000486960 HDGFL1Q5TGJ6 251 aa7.07□□□□□ -1.28
SF1-217ENST00000486960 MSL1Q68DK7 614 aa7.07□□□□□ -1.28
SF1-217ENST00000486960 FTSJ3Q8IY81 847 aaKnown RBP7.07□□□□□ -1.28
SF1-217ENST00000486960 MARCH10Q8NA82 808 aaPredicted RBP7.07□□□□□ -1.28
SF1-217ENST00000486960 CD2APQ9Y5K6 639 aa7.07□□□□□ -1.28
SF1-217ENST00000486960 CCDC61Q9Y6R9 512 aa7.07□□□□□ -1.28
SF1-217ENST00000486960 BCL9O00512 1426 aa7.07□□□□□ -1.28
SF1-217ENST00000486960 COL18A1P39060 1754 aa7.07□□□□□ -1.28
SF1-217ENST00000486960 CCDC88AQ3V6T2 1871 aa7.07□□□□□ -1.28
SF1-217ENST00000486960 KIF4AO95239 1232 aa7.06□□□□□ -1.28
SF1-217ENST00000486960 ATG7O95352 703 aa7.06□□□□□ -1.28
SF1-217ENST00000486960 RECKO95980 971 aa7.06□□□□□ -1.28
SF1-217ENST00000486960 BIRC2Q13490 618 aa7.06□□□□□ -1.28
SF1-217ENST00000486960 CAMK2BQ13554 666 aa7.06□□□□□ -1.28
SF1-217ENST00000486960 MFSD10Q14728 455 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms