RNA–Protein interactions for RNA: ENST00000486596.5

NECTIN3-208, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 5

Gene NECTIN3, Length 732 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-208ENST00000486596 KDM4AO75164 1064 aa8.72□□□□□ -1.01
NECTIN3-208ENST00000486596 RNF19BQ6ZMZ0 732 aa8.72□□□□□ -1.01
NECTIN3-208ENST00000486596 ABTB2Q8N961 1025 aa8.72□□□□□ -1.01
NECTIN3-208ENST00000486596 PPIP5K1Q6PFW1 1433 aa8.71□□□□□ -1.01
NECTIN3-208ENST00000486596 TNFRSF10AO00220 468 aa8.71□□□□□ -1.02
NECTIN3-208ENST00000486596 GCP02774 474 aa8.71□□□□□ -1.02
NECTIN3-208ENST00000486596 YY1P25490 414 aa8.71□□□□□ -1.02
NECTIN3-208ENST00000486596 ZNF787Q6DD87 383 aa8.71□□□□□ -1.02
NECTIN3-208ENST00000486596 REPIN1Q9BWE0 567 aaKnown RBP8.71□□□□□ -1.02
NECTIN3-208ENST00000486596 FAM217BQ9NTX9 383 aaPredicted RBP8.71□□□□□ -1.02
NECTIN3-208ENST00000486596 OVOS2A0A0G2JMS6 1433 aa8.71□□□□□ -1.02
NECTIN3-208ENST00000486596 OVOS2A0A0J9YW53 1432 aa8.71□□□□□ -1.02
NECTIN3-208ENST00000486596 CRB1P82279 1406 aa8.71□□□□□ -1.02
NECTIN3-208ENST00000486596 OVOS2Q6IE36 1432 aa8.71□□□□□ -1.02
NECTIN3-208ENST00000486596 SLIT3O75094 1523 aa8.7□□□□□ -1.02
NECTIN3-208ENST00000486596 CD2BP2O95400 341 aaKnown RBP8.7□□□□□ -1.02
NECTIN3-208ENST00000486596 SSTR3P32745 418 aaPredicted RBP8.7□□□□□ -1.02
NECTIN3-208ENST00000486596 Q3C1V9 767 aa8.7□□□□□ -1.02
NECTIN3-208ENST00000486596 NBPF14Q5TI25 921 aa8.7□□□□□ -1.02
NECTIN3-208ENST00000486596 PTF1AQ7RTS3 328 aa8.7□□□□□ -1.02
NECTIN3-208ENST00000486596 NUTM1Q86Y26 1132 aa8.7□□□□□ -1.02
NECTIN3-208ENST00000486596 PRDM9Q9NQV7 894 aa8.7□□□□□ -1.02
NECTIN3-208ENST00000486596 THRAP3Q9Y2W1 955 aaKnown RBP8.7□□□□□ -1.02
NECTIN3-208ENST00000486596 RGPD3A6NKT7 1758 aaPredicted RBP8.7□□□□□ -1.02
NECTIN3-208ENST00000486596 RGPD4Q7Z3J3 1758 aa8.7□□□□□ -1.02
NECTIN3-208ENST00000486596 KIAA1210Q9ULL0 1709 aa8.69□□□□□ -1.02
NECTIN3-208ENST00000486596 CASZ1Q86V15 1759 aa8.69□□□□□ -1.02
NECTIN3-208ENST00000486596 KCNQ2O43526 872 aa8.69□□□□□ -1.02
NECTIN3-208ENST00000486596 MMP16P51512 607 aa8.69□□□□□ -1.02
NECTIN3-208ENST00000486596 USP46P62068 366 aa8.69□□□□□ -1.02
NECTIN3-208ENST00000486596 NBPF1Q3BBV0 1214 aa8.69□□□□□ -1.02
NECTIN3-208ENST00000486596 NLRP13Q86W25 1043 aa8.69□□□□□ -1.02
NECTIN3-208ENST00000486596 AK7Q96M32 723 aa8.69□□□□□ -1.02
NECTIN3-208ENST00000486596 PDGFDQ9GZP0 370 aaPredicted RBP8.69□□□□□ -1.02
NECTIN3-208ENST00000486596 SPON1Q9HCB6 807 aa8.69□□□□□ -1.02
NECTIN3-208ENST00000486596 NINLQ9Y2I6 1382 aa8.69□□□□□ -1.02
NECTIN3-208ENST00000486596 USP6P35125 1406 aa8.69□□□□□ -1.02
NECTIN3-208ENST00000486596 PIK3C2AO00443 1686 aa8.69□□□□□ -1.02
NECTIN3-208ENST00000486596 WNK3Q9BYP7 1800 aa8.68□□□□□ -1.02
NECTIN3-208ENST00000486596 ZBTB7CA1YPR0 619 aa8.68□□□□□ -1.02
NECTIN3-208ENST00000486596 SRPK2P78362 688 aaKnown RBP8.68□□□□□ -1.02
NECTIN3-208ENST00000486596 HLA-CQ95604 372 aa8.68□□□□□ -1.02
NECTIN3-208ENST00000486596 SLC24A3Q9HC58 644 aa8.68□□□□□ -1.02
NECTIN3-208ENST00000486596 PPP1R1BQ9UD71 204 aaPredicted RBP8.68□□□□□ -1.02
NECTIN3-208ENST00000486596 FAM187AA6NFU0 413 aa8.67□□□□□ -1.02
NECTIN3-208ENST00000486596 COL18A1P39060 1754 aa8.67□□□□□ -1.02
NECTIN3-208ENST00000486596 MYOM1P52179 1685 aa8.67□□□□□ -1.02
NECTIN3-208ENST00000486596 GIGYF2Q6Y7W6 1299 aaKnown RBP8.67□□□□□ -1.02
NECTIN3-208ENST00000486596 AATKQ6ZMQ8 1374 aa8.67□□□□□ -1.02
NECTIN3-208ENST00000486596 QRICH2Q9H0J4 1663 aa8.67□□□□□ -1.02
NECTIN3-208ENST00000486596 TOR4AQ9NXH8 423 aa8.67□□□□□ -1.02
NECTIN3-208ENST00000486596 SBF2Q86WG5 1849 aa8.66□□□□□ -1.02
NECTIN3-208ENST00000486596 CPSF1Q10570 1443 aaKnown RBP8.66□□□□□ -1.02
NECTIN3-208ENST00000486596 CENPJQ9HC77 1338 aaPredicted RBP8.66□□□□□ -1.02
NECTIN3-208ENST00000486596 TRIM66O15016 1216 aa8.66□□□□□ -1.02
NECTIN3-208ENST00000486596 PLSCR1O15162 318 aa8.66□□□□□ -1.02
NECTIN3-208ENST00000486596 GUCA2AQ02747 115 aa8.66□□□□□ -1.02
NECTIN3-208ENST00000486596 DDB1Q16531 1140 aa8.66□□□□□ -1.02
NECTIN3-208ENST00000486596 AMHR2Q16671 573 aa8.66□□□□□ -1.02
NECTIN3-208ENST00000486596 TOM1L2Q6ZVM7 507 aa8.66□□□□□ -1.02
NECTIN3-208ENST00000486596 CABP1Q9NZU7 370 aa8.66□□□□□ -1.02
NECTIN3-208ENST00000486596 UTRNP46939 3433 aa8.66□□□□□ -1.02
NECTIN3-208ENST00000486596 BRD4O60885 1362 aaPredicted RBP8.65□□□□□ -1.02
NECTIN3-208ENST00000486596 WDR17Q8IZU2 1322 aa8.65□□□□□ -1.02
NECTIN3-208ENST00000486596 FOXC1Q12948 553 aa8.65□□□□□ -1.02
NECTIN3-208ENST00000486596 MARCH10Q8NA82 808 aaPredicted RBP8.65□□□□□ -1.02
NECTIN3-208ENST00000486596 USB1Q9BQ65 265 aaKnown RBP8.65□□□□□ -1.02
NECTIN3-208ENST00000486596 BCL9O00512 1426 aa8.64□□□□□ -1.03
NECTIN3-208ENST00000486596 C11orf95C9JLR9 678 aaPredicted RBP8.64□□□□□ -1.03
NECTIN3-208ENST00000486596 HOXA2O43364 376 aa8.64□□□□□ -1.03
NECTIN3-208ENST00000486596 DXOO77932 396 aaKnown RBP8.64□□□□□ -1.03
NECTIN3-208ENST00000486596 ZBTB7AO95365 584 aa8.64□□□□□ -1.03
NECTIN3-208ENST00000486596 AVPP01185 164 aa8.64□□□□□ -1.03
NECTIN3-208ENST00000486596 CRIPAKQ8N1N5 446 aa8.64□□□□□ -1.03
NECTIN3-208ENST00000486596 AKAP12Q02952 1782 aa8.63□□□□□ -1.03
NECTIN3-208ENST00000486596 ZBTB24O43167 697 aaPredicted RBP8.63□□□□□ -1.03
NECTIN3-208ENST00000486596 PARP9Q8IXQ6 854 aa8.63□□□□□ -1.03
NECTIN3-208ENST00000486596 BEGAINQ9BUH8 593 aa8.63□□□□□ -1.03
NECTIN3-208ENST00000486596 AAASQ9NRG9 546 aa8.63□□□□□ -1.03
NECTIN3-208ENST00000486596 NFAT5O94916 1531 aa8.63□□□□□ -1.03
NECTIN3-208ENST00000486596 TRPM1Q7Z4N2 1603 aa8.62□□□□□ -1.03
NECTIN3-208ENST00000486596 TXNRD1Q16881 649 aa8.62□□□□□ -1.03
NECTIN3-208ENST00000486596 ARHGEF25Q86VW2 580 aa8.62□□□□□ -1.03
NECTIN3-208ENST00000486596 ZNF775Q96BV0 537 aaPredicted RBP8.62□□□□□ -1.03
NECTIN3-208ENST00000486596 TNS2Q63HR2 1409 aa8.62□□□□□ -1.03
NECTIN3-208ENST00000486596 RGPD5Q99666 1765 aa8.61□□□□□ -1.03
NECTIN3-208ENST00000486596 TTC21BQ7Z4L5 1316 aa8.61□□□□□ -1.03
NECTIN3-208ENST00000486596 PDE4DQ08499 809 aa8.61□□□□□ -1.03
NECTIN3-208ENST00000486596 NHSQ6T4R5 1651 aa8.61□□□□□ -1.03
NECTIN3-208ENST00000486596 PAPPAQ13219 1627 aa8.61□□□□□ -1.03
NECTIN3-208ENST00000486596 POTECB2RU33 542 aa8.6□□□□□ -1.03
NECTIN3-208ENST00000486596 WNT7AO00755 349 aa8.6□□□□□ -1.03
NECTIN3-208ENST00000486596 CSB-PGBD3P0DP91 1061 aa8.6□□□□□ -1.03
NECTIN3-208ENST00000486596 TRIM32Q13049 653 aa8.6□□□□□ -1.03
NECTIN3-208ENST00000486596 SLC15A2Q16348 729 aa8.6□□□□□ -1.03
NECTIN3-208ENST00000486596 CYP4X1Q8N118 509 aa8.6□□□□□ -1.03
NECTIN3-208ENST00000486596 ZNF784Q8NCA9 323 aaPredicted RBP8.6□□□□□ -1.03
NECTIN3-208ENST00000486596 SPIRE2Q8WWL2 714 aa8.6□□□□□ -1.03
NECTIN3-208ENST00000486596 SYMPKQ92797 1274 aaKnown RBP8.6□□□□□ -1.03
NECTIN3-208ENST00000486596 SYT17Q9BSW7 474 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms