RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 SETDB2Q96T68 719 aa19.25■□□□□ 0.67
SDCCAG3-211ENST00000486441 ZNF330Q9Y3S2 320 aaPredicted RBP19.25■□□□□ 0.67
SDCCAG3-211ENST00000486441 KLRG2A4D1S0 409 aaPredicted RBP19.24■□□□□ 0.67
SDCCAG3-211ENST00000486441 CAPN15O75808 1086 aa19.24■□□□□ 0.67
SDCCAG3-211ENST00000486441 CNBD1Q8NA66 436 aa19.24■□□□□ 0.67
SDCCAG3-211ENST00000486441 RSPH6AQ9H0K4 717 aa19.24■□□□□ 0.67
SDCCAG3-211ENST00000486441 TAOK3Q9H2K8 898 aa19.24■□□□□ 0.67
SDCCAG3-211ENST00000486441 CHADLQ6NUI6 762 aa19.23■□□□□ 0.67
SDCCAG3-211ENST00000486441 CCER1Q8TC90 406 aaPredicted RBP19.23■□□□□ 0.67
SDCCAG3-211ENST00000486441 CNKSR1Q969H4 720 aa19.23■□□□□ 0.67
SDCCAG3-211ENST00000486441 BTBD11A6QL63 1104 aa19.22■□□□□ 0.67
SDCCAG3-211ENST00000486441 DZIP3Q86Y13 1208 aaKnown RBP19.22■□□□□ 0.67
SDCCAG3-211ENST00000486441 MASTLQ96GX5 879 aa19.22■□□□□ 0.67
SDCCAG3-211ENST00000486441 NBPF26B4DH59 902 aa19.21■□□□□ 0.67
SDCCAG3-211ENST00000486441 PRKAR2BP31323 418 aa19.21■□□□□ 0.67
SDCCAG3-211ENST00000486441 NBPF10Q6P3W6 841 aaKnown RBP19.21■□□□□ 0.67
SDCCAG3-211ENST00000486441 OLFM4Q6UX06 510 aa19.21■□□□□ 0.67
SDCCAG3-211ENST00000486441 NBPF15Q8N660 670 aa19.21■□□□□ 0.67
SDCCAG3-211ENST00000486441 CREBZFQ9NS37 354 aa19.21■□□□□ 0.67
SDCCAG3-211ENST00000486441 PASKQ96RG2 1323 aa19.21■□□□□ 0.67
SDCCAG3-211ENST00000486441 CNGB1Q14028 1251 aaPredicted RBP19.2■□□□□ 0.66
SDCCAG3-211ENST00000486441 CLEC4GQ6UXB4 293 aa19.2■□□□□ 0.66
SDCCAG3-211ENST00000486441 L3MBTL3Q96JM7 780 aaPredicted RBP19.2■□□□□ 0.66
SDCCAG3-211ENST00000486441 ITGBL1O95965 494 aaPredicted RBP19.19■□□□□ 0.66
SDCCAG3-211ENST00000486441 MKRN1Q9UHC7 482 aaKnown RBP19.19■□□□□ 0.66
SDCCAG3-211ENST00000486441 BCORQ6W2J9 1755 aa19.19■□□□□ 0.66
SDCCAG3-211ENST00000486441 ST5P78524 1137 aa19.18■□□□□ 0.66
SDCCAG3-211ENST00000486441 TAF1DQ9H5J8 278 aaPredicted RBP19.18■□□□□ 0.66
SDCCAG3-211ENST00000486441 MCM10Q7L590 875 aa19.17■□□□□ 0.66
SDCCAG3-211ENST00000486441 ARFGEF2Q9Y6D5 1785 aa19.16■□□□□ 0.66
SDCCAG3-211ENST00000486441 SNRPA1P09661 255 aaKnown RBP19.16■□□□□ 0.66
SDCCAG3-211ENST00000486441 SOGA3Q5TF21 947 aa19.16■□□□□ 0.66
SDCCAG3-211ENST00000486441 NBPF5PQ86XG9 351 aaPredicted RBP19.16■□□□□ 0.66
SDCCAG3-211ENST00000486441 ZNF541Q9H0D2 1346 aa19.16■□□□□ 0.66
SDCCAG3-211ENST00000486441 SNED1Q8TER0 1413 aa19.16■□□□□ 0.66
SDCCAG3-211ENST00000486441 NPR1P16066 1061 aa19.15■□□□□ 0.66
SDCCAG3-211ENST00000486441 DCTN1Q14203 1278 aa19.15■□□□□ 0.66
SDCCAG3-211ENST00000486441 HLFQ16534 295 aa19.15■□□□□ 0.66
SDCCAG3-211ENST00000486441 ZNF277Q9NRM2 450 aaPredicted RBP19.15■□□□□ 0.66
SDCCAG3-211ENST00000486441 CACNA1SQ13698 1873 aa19.15■□□□□ 0.66
SDCCAG3-211ENST00000486441 CNTNAP1P78357 1384 aa19.15■□□□□ 0.66
SDCCAG3-211ENST00000486441 RGL2O15211 777 aa19.14■□□□□ 0.65
SDCCAG3-211ENST00000486441 FOXN1O15353 648 aa19.14■□□□□ 0.65
SDCCAG3-211ENST00000486441 FKBP4Q02790 459 aaKnown RBP eCLIP19.14■□□□□ 0.65
SDCCAG3-211ENST00000486441 CCDC93Q567U6 631 aa19.14■□□□□ 0.65
SDCCAG3-211ENST00000486441 LDHDQ86WU2 507 aa19.14■□□□□ 0.65
SDCCAG3-211ENST00000486441 TPTE2Q6XPS3 522 aa19.12■□□□□ 0.65
SDCCAG3-211ENST00000486441 NPM2Q86SE8 214 aaKnown RBP19.12■□□□□ 0.65
SDCCAG3-211ENST00000486441 NIP7Q9Y221 180 aaKnown RBP eCLIP19.12■□□□□ 0.65
SDCCAG3-211ENST00000486441 SCN4AP35499 1836 aa19.11■□□□□ 0.65
SDCCAG3-211ENST00000486441 IQCA1LA6NCM1 817 aa19.11■□□□□ 0.65
SDCCAG3-211ENST00000486441 FZD9O00144 591 aa19.11■□□□□ 0.65
SDCCAG3-211ENST00000486441 NPHP1O15259 732 aa19.11■□□□□ 0.65
SDCCAG3-211ENST00000486441 VEGFBP49765 207 aa19.11■□□□□ 0.65
SDCCAG3-211ENST00000486441 MIS18AQ9NYP9 233 aa19.11■□□□□ 0.65
SDCCAG3-211ENST00000486441 PPP2R1AP30153 589 aa19.1■□□□□ 0.65
SDCCAG3-211ENST00000486441 SLC51AQ86UW1 340 aa19.1■□□□□ 0.65
SDCCAG3-211ENST00000486441 ADAMTSL1Q8N6G6 1762 aa19.1■□□□□ 0.65
SDCCAG3-211ENST00000486441 FAM177BA6PVY3 158 aa19.09■□□□□ 0.65
SDCCAG3-211ENST00000486441 HTATSF1O43719 755 aaKnown RBP19.09■□□□□ 0.65
SDCCAG3-211ENST00000486441 U2AF1L5P0DN76 240 aaPredicted RBP19.09■□□□□ 0.65
SDCCAG3-211ENST00000486441 U2AF1Q01081 240 aaKnown RBP eCLIP19.09■□□□□ 0.65
SDCCAG3-211ENST00000486441 CRY2Q49AN0 593 aa19.09■□□□□ 0.65
SDCCAG3-211ENST00000486441 SYNE4Q8N205 404 aa19.09■□□□□ 0.65
SDCCAG3-211ENST00000486441 ZNF652Q9Y2D9 606 aa19.09■□□□□ 0.65
SDCCAG3-211ENST00000486441 COL4A5P29400 1685 aa19.08■□□□□ 0.65
SDCCAG3-211ENST00000486441 TMEM88BA6NKF7 163 aa19.08■□□□□ 0.64
SDCCAG3-211ENST00000486441 IARSP41252 1262 aaKnown RBP19.08■□□□□ 0.64
SDCCAG3-211ENST00000486441 TAF7Q15545 349 aaPredicted RBP19.08■□□□□ 0.64
SDCCAG3-211ENST00000486441 RTKN2Q8IZC4 609 aa19.08■□□□□ 0.64
SDCCAG3-211ENST00000486441 WBP1LQ9NX94 342 aa19.08■□□□□ 0.64
SDCCAG3-211ENST00000486441 HACL1Q9UJ83 578 aa19.08■□□□□ 0.64
SDCCAG3-211ENST00000486441 ABCC12Q96J65 1359 aa19.07■□□□□ 0.64
SDCCAG3-211ENST00000486441 EPHX2P34913 555 aa19.07■□□□□ 0.64
SDCCAG3-211ENST00000486441 CFAP53Q96M91 514 aa19.07■□□□□ 0.64
SDCCAG3-211ENST00000486441 PRDM10Q9NQV6 1147 aa19.07■□□□□ 0.64
SDCCAG3-211ENST00000486441 RNF123Q5XPI4 1314 aa19.06■□□□□ 0.64
SDCCAG3-211ENST00000486441 ALDH1B1P30837 517 aa19.06■□□□□ 0.64
SDCCAG3-211ENST00000486441 EAPPQ56P03 285 aaPredicted RBP19.06■□□□□ 0.64
SDCCAG3-211ENST00000486441 MAP1SQ66K74 1059 aaPredicted RBP19.06■□□□□ 0.64
SDCCAG3-211ENST00000486441 RTF1Q92541 710 aaKnown RBP19.06■□□□□ 0.64
SDCCAG3-211ENST00000486441 NUDCQ9Y266 331 aa19.06■□□□□ 0.64
SDCCAG3-211ENST00000486441 TTLL7Q6ZT98 887 aa19.05■□□□□ 0.64
SDCCAG3-211ENST00000486441 NUTM1Q86Y26 1132 aa19.05■□□□□ 0.64
SDCCAG3-211ENST00000486441 CNTROBQ8N137 903 aa19.05■□□□□ 0.64
SDCCAG3-211ENST00000486441 PSMD1Q99460 953 aa19.05■□□□□ 0.64
SDCCAG3-211ENST00000486441 RASSF10A6NK89 507 aa19.04■□□□□ 0.64
SDCCAG3-211ENST00000486441 HOXA10P31260 410 aaPredicted RBP19.04■□□□□ 0.64
SDCCAG3-211ENST00000486441 GPC2Q8N158 579 aa19.04■□□□□ 0.64
SDCCAG3-211ENST00000486441 ERVV-1B6SEH8 477 aa19.03■□□□□ 0.64
SDCCAG3-211ENST00000486441 FMR1Q06787 632 aaKnown RBP eCLIP19.03■□□□□ 0.64
SDCCAG3-211ENST00000486441 LTBP1Q14766 1721 aa19.03■□□□□ 0.64
SDCCAG3-211ENST00000486441 UBN2Q6ZU65 1347 aa19.02■□□□□ 0.64
SDCCAG3-211ENST00000486441 EIF4A1P60842 406 aaKnown RBP19.02■□□□□ 0.64
SDCCAG3-211ENST00000486441 C3orf67Q6ZVT6 689 aa19.02■□□□□ 0.64
SDCCAG3-211ENST00000486441 PNMA8AQ86V59 439 aaPredicted RBP19.02■□□□□ 0.64
SDCCAG3-211ENST00000486441 CLEC11AQ9Y240 323 aa19.02■□□□□ 0.64
SDCCAG3-211ENST00000486441 MAP3K15Q6ZN16 1313 aa19.01■□□□□ 0.63
SDCCAG3-211ENST00000486441 CTCFP49711 727 aaPredicted RBP19.01■□□□□ 0.63
SDCCAG3-211ENST00000486441 SUSD4Q5VX71 490 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms