RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 CHPF2Q9P2E5 772 aa25.68■■□□□ 1.7
LIMK1-206ENST00000486361 YBX3P16989 372 aaKnown RBP eCLIP25.67■■□□□ 1.7
LIMK1-206ENST00000486361 AIMP1Q12904 312 aaKnown RBP25.67■■□□□ 1.7
LIMK1-206ENST00000486361 CLEC4GQ6UXB4 293 aa25.67■■□□□ 1.7
LIMK1-206ENST00000486361 KIF6Q6ZMV9 814 aa25.67■■□□□ 1.7
LIMK1-206ENST00000486361 TSPYL6Q8N831 410 aa25.67■■□□□ 1.7
LIMK1-206ENST00000486361 ZNF652Q9Y2D9 606 aa25.67■■□□□ 1.7
LIMK1-206ENST00000486361 HOXB7P09629 217 aa25.66■■□□□ 1.7
LIMK1-206ENST00000486361 TGFB2P61812 414 aa25.66■■□□□ 1.7
LIMK1-206ENST00000486361 WDR63Q8IWG1 891 aa25.66■■□□□ 1.7
LIMK1-206ENST00000486361 IL16Q14005 1332 aa25.65■■□□□ 1.7
LIMK1-206ENST00000486361 MAP3K15Q6ZN16 1313 aa25.65■■□□□ 1.7
LIMK1-206ENST00000486361 FAM177BA6PVY3 158 aa25.65■■□□□ 1.7
LIMK1-206ENST00000486361 COPS6Q7L5N1 327 aa25.65■■□□□ 1.7
LIMK1-206ENST00000486361 XAGE3Q8WTP9 111 aa25.65■■□□□ 1.7
LIMK1-206ENST00000486361 SPINK5Q9NQ38 1064 aaPredicted RBP25.65■■□□□ 1.7
LIMK1-206ENST00000486361 DDX21Q9NR30 783 aaKnown RBP eCLIP25.65■■□□□ 1.7
LIMK1-206ENST00000486361 NIP7Q9Y221 180 aaKnown RBP eCLIP25.65■■□□□ 1.7
LIMK1-206ENST00000486361 PXDNLA1KZ92 1463 aa25.65■■□□□ 1.7
LIMK1-206ENST00000486361 BCORQ6W2J9 1755 aa25.64■■□□□ 1.7
LIMK1-206ENST00000486361 CHRNA5P30532 468 aa25.64■■□□□ 1.7
LIMK1-206ENST00000486361 AFDNP55196 1824 aaKnown RBP25.63■■□□□ 1.69
LIMK1-206ENST00000486361 ERVV-1B6SEH8 477 aa25.63■■□□□ 1.69
LIMK1-206ENST00000486361 PRR5LQ6MZQ0 368 aa25.63■■□□□ 1.69
LIMK1-206ENST00000486361 CARMIL3Q8ND23 1372 aa25.63■■□□□ 1.69
LIMK1-206ENST00000486361 KCNA3P22001 575 aa25.62■■□□□ 1.69
LIMK1-206ENST00000486361 N4BP2Q86UW6 1770 aaPredicted RBP25.61■■□□□ 1.69
LIMK1-206ENST00000486361 KIF13BQ9NQT8 1826 aa25.61■■□□□ 1.69
LIMK1-206ENST00000486361 DBF4Q9UBU7 674 aaPredicted RBP25.61■■□□□ 1.69
LIMK1-206ENST00000486361 FANCIQ9NVI1 1328 aa25.61■■□□□ 1.69
LIMK1-206ENST00000486361 TCERG1O14776 1098 aaKnown RBP25.6■■□□□ 1.69
LIMK1-206ENST00000486361 NPHP1O15259 732 aa25.6■■□□□ 1.69
LIMK1-206ENST00000486361 GPTP24298 496 aa25.6■■□□□ 1.69
LIMK1-206ENST00000486361 NBPF5PQ86XG9 351 aaPredicted RBP25.6■■□□□ 1.69
LIMK1-206ENST00000486361 CNBD1Q8NA66 436 aa25.59■■□□□ 1.69
LIMK1-206ENST00000486361 KIAA1551Q9HCM1 1747 aa25.59■■□□□ 1.69
LIMK1-206ENST00000486361 NRXN2Q9P2S2 1712 aa25.59■■□□□ 1.69
LIMK1-206ENST00000486361 RGL2O15211 777 aa25.58■■□□□ 1.69
LIMK1-206ENST00000486361 GIGYF2Q6Y7W6 1299 aaKnown RBP25.58■■□□□ 1.69
LIMK1-206ENST00000486361 BCS1LQ9Y276 419 aa25.58■■□□□ 1.69
LIMK1-206ENST00000486361 TWISTNBQ3B726 338 aaPredicted RBP25.57■■□□□ 1.68
LIMK1-206ENST00000486361 PHAXQ9H814 394 aaKnown RBP25.57■■□□□ 1.68
LIMK1-206ENST00000486361 EXOSC9Q06265 439 aaKnown RBP25.56■■□□□ 1.68
LIMK1-206ENST00000486361 C2CD5Q86YS7 1000 aa25.56■■□□□ 1.68
LIMK1-206ENST00000486361 ZNF34Q8IZ26 560 aa25.56■■□□□ 1.68
LIMK1-206ENST00000486361 HYPKQ9NX55 129 aa25.56■■□□□ 1.68
LIMK1-206ENST00000486361 ZNF521Q96K83 1311 aa25.56■■□□□ 1.68
LIMK1-206ENST00000486361 GRIN3BO60391 1043 aa25.55■■□□□ 1.68
LIMK1-206ENST00000486361 ST5P78524 1137 aa25.55■■□□□ 1.68
LIMK1-206ENST00000486361 GOLGA2Q08379 1002 aa25.55■■□□□ 1.68
LIMK1-206ENST00000486361 CCDC30Q5VVM6 783 aa25.55■■□□□ 1.68
LIMK1-206ENST00000486361 TPTE2Q6XPS3 522 aa25.55■■□□□ 1.68
LIMK1-206ENST00000486361 BRIP1Q9BX63 1249 aa25.55■■□□□ 1.68
LIMK1-206ENST00000486361 PIM2Q9P1W9 311 aa25.55■■□□□ 1.68
LIMK1-206ENST00000486361 UBN2Q6ZU65 1347 aa25.55■■□□□ 1.68
LIMK1-206ENST00000486361 NUP98P52948 1817 aa25.54■■□□□ 1.68
LIMK1-206ENST00000486361 ZNF428Q96B54 188 aa25.54■■□□□ 1.68
LIMK1-206ENST00000486361 SUSD4Q5VX71 490 aa25.53■■□□□ 1.68
LIMK1-206ENST00000486361 ANKRD13DQ6ZTN6 518 aa25.53■■□□□ 1.68
LIMK1-206ENST00000486361 NUTM1Q86Y26 1132 aa25.53■■□□□ 1.68
LIMK1-206ENST00000486361 H0YIN7 160 aa25.52■■□□□ 1.68
LIMK1-206ENST00000486361 GTF2E1P29083 439 aaPredicted RBP25.52■■□□□ 1.68
LIMK1-206ENST00000486361 MYH16Q9H6N6 1097 aa25.52■■□□□ 1.68
LIMK1-206ENST00000486361 ATP10DQ9P241 1426 aa25.52■■□□□ 1.68
LIMK1-206ENST00000486361 PDE6BP35913 854 aa25.51■■□□□ 1.67
LIMK1-206ENST00000486361 DALRD3Q5D0E6 543 aaKnown RBP25.51■■□□□ 1.67
LIMK1-206ENST00000486361 PLBD2Q8NHP8 589 aa25.51■■□□□ 1.67
LIMK1-206ENST00000486361 VAMP4O75379 141 aa25.5■■□□□ 1.67
LIMK1-206ENST00000486361 YY1P25490 414 aa25.5■■□□□ 1.67
LIMK1-206ENST00000486361 TCIRG1Q13488 830 aa25.5■■□□□ 1.67
LIMK1-206ENST00000486361 ERFEQ4G0M1 354 aa25.5■■□□□ 1.67
LIMK1-206ENST00000486361 ZNF622Q969S3 477 aaKnown RBP eCLIP25.5■■□□□ 1.67
LIMK1-206ENST00000486361 ANKRD31Q8N7Z5 1873 aa25.49■■□□□ 1.67
LIMK1-206ENST00000486361 CDCA7LQ96GN5 454 aa25.48■■□□□ 1.67
LIMK1-206ENST00000486361 STK31Q9BXU1 1019 aa25.48■■□□□ 1.67
LIMK1-206ENST00000486361 NYXQ9GZU5 481 aa25.48■■□□□ 1.67
LIMK1-206ENST00000486361 UTRNP46939 3433 aa25.47■■□□□ 1.67
LIMK1-206ENST00000486361 ATP5J2-PTCD1G3V325 749 aa25.47■■□□□ 1.67
LIMK1-206ENST00000486361 SLC4A2P04920 1241 aa25.47■■□□□ 1.67
LIMK1-206ENST00000486361 HSP90AB3PQ58FF7 597 aa25.47■■□□□ 1.67
LIMK1-206ENST00000486361 G2E3Q7L622 706 aa25.47■■□□□ 1.67
LIMK1-206ENST00000486361 RIC3Q7Z5B4 369 aa25.47■■□□□ 1.67
LIMK1-206ENST00000486361 CHMP4AQ9BY43 222 aa25.47■■□□□ 1.67
LIMK1-206ENST00000486361 GOLGB1Q14789 3259 aaKnown RBP25.46■■□□□ 1.67
LIMK1-206ENST00000486361 NTSR2O95665 410 aa25.46■■□□□ 1.67
LIMK1-206ENST00000486361 PARP10Q53GL7 1025 aa25.46■■□□□ 1.67
LIMK1-206ENST00000486361 ARHGAP27Q6ZUM4 889 aa25.46■■□□□ 1.67
LIMK1-206ENST00000486361 NLRP10Q86W26 655 aa25.46■■□□□ 1.67
LIMK1-206ENST00000486361 ABCC12Q96J65 1359 aa25.45■■□□□ 1.67
LIMK1-206ENST00000486361 PPP1R42Q7Z4L9 355 aa25.45■■□□□ 1.66
LIMK1-206ENST00000486361 TTLL6Q8N841 843 aa25.45■■□□□ 1.66
LIMK1-206ENST00000486361 UTP14AQ9BVJ6 771 aaKnown RBP25.45■■□□□ 1.66
LIMK1-206ENST00000486361 SRGNP10124 158 aa25.44■■□□□ 1.66
LIMK1-206ENST00000486361 SYNE4Q8N205 404 aa25.44■■□□□ 1.66
LIMK1-206ENST00000486361 ZNF219Q9P2Y4 722 aaPredicted RBP25.44■■□□□ 1.66
LIMK1-206ENST00000486361 BRCA1P38398 1863 aaKnown RBP25.44■■□□□ 1.66
LIMK1-206ENST00000486361 SLFN5Q08AF3 891 aa25.43■■□□□ 1.66
LIMK1-206ENST00000486361 ISCA1Q9BUE6 129 aa25.43■■□□□ 1.66
LIMK1-206ENST00000486361 PDZRN3Q9UPQ7 1066 aa25.43■■□□□ 1.66
LIMK1-206ENST00000486361 E9PSI1 815 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms