RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 TOM1L2Q6ZVM7 507 aa7.55□□□□□ -1.2
COPS3-208ENST00000486032 CFAP53Q96M91 514 aa7.55□□□□□ -1.2
COPS3-208ENST00000486032 PNMA3Q9UL41 463 aa7.55□□□□□ -1.2
COPS3-208ENST00000486032 AATKQ6ZMQ8 1374 aa7.55□□□□□ -1.2
COPS3-208ENST00000486032 FAM208AQ9UK61 1670 aaKnown RBP7.54□□□□□ -1.2
COPS3-208ENST00000486032 SEPT12Q8IYM1 358 aa7.54□□□□□ -1.2
COPS3-208ENST00000486032 USHBP1Q8N6Y0 703 aa7.54□□□□□ -1.2
COPS3-208ENST00000486032 NLRP2Q9NX02 1062 aa7.54□□□□□ -1.2
COPS3-208ENST00000486032 FLT4P35916 1363 aa7.54□□□□□ -1.2
COPS3-208ENST00000486032 SPATA31A1Q5TZJ5 1347 aa7.53□□□□□ -1.2
COPS3-208ENST00000486032 DIAPH1O60610 1272 aaKnown RBP7.53□□□□□ -1.2
COPS3-208ENST00000486032 PRSS12P56730 875 aa7.53□□□□□ -1.2
COPS3-208ENST00000486032 EIF4A2Q14240 407 aaKnown RBP7.53□□□□□ -1.2
COPS3-208ENST00000486032 TSR1Q2NL82 804 aaKnown RBP7.53□□□□□ -1.2
COPS3-208ENST00000486032 CCDC184Q52MB2 194 aa7.53□□□□□ -1.2
COPS3-208ENST00000486032 ZSCAN1Q8NBB4 408 aa7.53□□□□□ -1.2
COPS3-208ENST00000486032 MRS2Q9HD23 443 aa7.53□□□□□ -1.2
COPS3-208ENST00000486032 SMG6Q86US8 1419 aaKnown RBP7.52□□□□□ -1.2
COPS3-208ENST00000486032 TNS1Q9HBL0 1735 aaKnown RBP7.52□□□□□ -1.2
COPS3-208ENST00000486032 RTL1A6NKG5 1358 aa7.52□□□□□ -1.21
COPS3-208ENST00000486032 INSRP06213 1382 aa7.52□□□□□ -1.21
COPS3-208ENST00000486032 MAP3K7O43318 606 aa7.52□□□□□ -1.21
COPS3-208ENST00000486032 HMOX1P09601 288 aa7.52□□□□□ -1.21
COPS3-208ENST00000486032 EN1Q05925 392 aaPredicted RBP7.52□□□□□ -1.21
COPS3-208ENST00000486032 FOXC1Q12948 553 aa7.52□□□□□ -1.21
COPS3-208ENST00000486032 FAM198AQ9UFP1 575 aa7.52□□□□□ -1.21
COPS3-208ENST00000486032 NUDCQ9Y266 331 aa7.52□□□□□ -1.21
COPS3-208ENST00000486032 SHANK3Q9BYB0 1731 aa7.52□□□□□ -1.21
COPS3-208ENST00000486032 PARP4Q9UKK3 1724 aaKnown RBP7.52□□□□□ -1.21
COPS3-208ENST00000486032 DISP2A7MBM2 1401 aa7.52□□□□□ -1.21
COPS3-208ENST00000486032 BLMP54132 1417 aaPredicted RBP7.52□□□□□ -1.21
COPS3-208ENST00000486032 C3orf80F5H4A9 247 aa7.51□□□□□ -1.21
COPS3-208ENST00000486032 U2AF1L5P0DN76 240 aaPredicted RBP7.51□□□□□ -1.21
COPS3-208ENST00000486032 IL13P35225 146 aa7.51□□□□□ -1.21
COPS3-208ENST00000486032 SMCPP49901 116 aaPredicted RBP7.51□□□□□ -1.21
COPS3-208ENST00000486032 U2AF1Q01081 240 aaKnown RBP eCLIP7.51□□□□□ -1.21
COPS3-208ENST00000486032 WDR43Q15061 677 aaKnown RBP eCLIP7.51□□□□□ -1.21
COPS3-208ENST00000486032 NBPF6Q5VWK0 638 aa7.51□□□□□ -1.21
COPS3-208ENST00000486032 PTF1AQ7RTS3 328 aa7.51□□□□□ -1.21
COPS3-208ENST00000486032 SLF2Q8IX21 1173 aa7.51□□□□□ -1.21
COPS3-208ENST00000486032 NBPF4Q96M43 638 aa7.51□□□□□ -1.21
COPS3-208ENST00000486032 EYA1Q99502 592 aa7.51□□□□□ -1.21
COPS3-208ENST00000486032 PRR14Q9BWN1 585 aa7.51□□□□□ -1.21
COPS3-208ENST00000486032 PKD2L1Q9P0L9 805 aa7.51□□□□□ -1.21
COPS3-208ENST00000486032 PCDHB3Q9Y5E6 796 aa7.51□□□□□ -1.21
COPS3-208ENST00000486032 WDR17Q8IZU2 1322 aa7.51□□□□□ -1.21
COPS3-208ENST00000486032 SENP3-EIF4A1A0A087X0R7 540 aa7.5□□□□□ -1.21
COPS3-208ENST00000486032 S1PR4O95977 384 aa7.5□□□□□ -1.21
COPS3-208ENST00000486032 SULT6B1Q6IMI4 303 aa7.5□□□□□ -1.21
COPS3-208ENST00000486032 FAM9BQ8IZU0 186 aa7.5□□□□□ -1.21
COPS3-208ENST00000486032 DDX12PQ92771 950 aa7.5□□□□□ -1.21
COPS3-208ENST00000486032 CRB1P82279 1406 aa7.5□□□□□ -1.21
COPS3-208ENST00000486032 KIF24Q5T7B8 1368 aa7.49□□□□□ -1.21
COPS3-208ENST00000486032 MEGF6O75095 1541 aa7.49□□□□□ -1.21
COPS3-208ENST00000486032 ABCC6O95255 1503 aa7.49□□□□□ -1.21
COPS3-208ENST00000486032 DEFB132Q7Z7B7 95 aa7.49□□□□□ -1.21
COPS3-208ENST00000486032 AEBP1Q8IUX7 1158 aa7.49□□□□□ -1.21
COPS3-208ENST00000486032 TATP17735 454 aaPredicted RBP7.48□□□□□ -1.21
COPS3-208ENST00000486032 SLC4A3P48751 1232 aa7.48□□□□□ -1.21
COPS3-208ENST00000486032 KRT27Q7Z3Y8 459 aa7.48□□□□□ -1.21
COPS3-208ENST00000486032 CCDC146Q8IYE0 955 aa7.48□□□□□ -1.21
COPS3-208ENST00000486032 TCP11L2Q8N4U5 519 aa7.48□□□□□ -1.21
COPS3-208ENST00000486032 SLC16A10Q8TF71 515 aa7.48□□□□□ -1.21
COPS3-208ENST00000486032 RAPGEF4Q8WZA2 1011 aa7.48□□□□□ -1.21
COPS3-208ENST00000486032 CARD10Q9BWT7 1032 aa7.48□□□□□ -1.21
COPS3-208ENST00000486032 COL3A1P02461 1466 aaPredicted RBP7.48□□□□□ -1.21
COPS3-208ENST00000486032 TLL1O43897 1013 aa7.47□□□□□ -1.21
COPS3-208ENST00000486032 SNRPBP14678 240 aaKnown RBP7.47□□□□□ -1.21
COPS3-208ENST00000486032 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
COPS3-208ENST00000486032 PRKAR2BP31323 418 aa7.47□□□□□ -1.21
COPS3-208ENST00000486032 NBR1Q14596 966 aa7.47□□□□□ -1.21
COPS3-208ENST00000486032 BLOC1S3Q6QNY0 202 aa7.47□□□□□ -1.21
COPS3-208ENST00000486032 NUDT18Q6ZVK8 323 aa7.47□□□□□ -1.21
COPS3-208ENST00000486032 TOR4AQ9NXH8 423 aa7.47□□□□□ -1.21
COPS3-208ENST00000486032 ADAMTS8Q9UP79 889 aa7.47□□□□□ -1.21
COPS3-208ENST00000486032 SBF2Q86WG5 1849 aa7.47□□□□□ -1.21
COPS3-208ENST00000486032 IGSF1Q8N6C5 1336 aa7.47□□□□□ -1.21
COPS3-208ENST00000486032 CCER2I3L3R5 266 aa7.46□□□□□ -1.22
COPS3-208ENST00000486032 NEFMP07197 916 aa7.46□□□□□ -1.22
COPS3-208ENST00000486032 IL2RBP14784 551 aa7.46□□□□□ -1.22
COPS3-208ENST00000486032 NKX1-1Q15270 411 aaPredicted RBP7.46□□□□□ -1.22
COPS3-208ENST00000486032 SWT1Q5T5J6 900 aaKnown RBP7.46□□□□□ -1.22
COPS3-208ENST00000486032 BARGINQ6ZT62 677 aa7.46□□□□□ -1.22
COPS3-208ENST00000486032 CYP4X1Q8N118 509 aa7.46□□□□□ -1.22
COPS3-208ENST00000486032 MARCH10Q8NA82 808 aaPredicted RBP7.46□□□□□ -1.22
COPS3-208ENST00000486032 DDX54Q8TDD1 881 aaKnown RBP7.46□□□□□ -1.22
COPS3-208ENST00000486032 TOGARAM1Q9Y4F4 1720 aa7.46□□□□□ -1.22
COPS3-208ENST00000486032 TNS2Q63HR2 1409 aa7.45□□□□□ -1.22
COPS3-208ENST00000486032 RGPD1P0DJD0 1748 aa7.45□□□□□ -1.22
COPS3-208ENST00000486032 EXOC5O00471 708 aa7.45□□□□□ -1.22
COPS3-208ENST00000486032 NEUROD2Q15784 382 aa7.45□□□□□ -1.22
COPS3-208ENST00000486032 DDB1Q16531 1140 aa7.45□□□□□ -1.22
COPS3-208ENST00000486032 PNISRQ8TF01 805 aaKnown RBP7.45□□□□□ -1.22
COPS3-208ENST00000486032 SENP2Q9HC62 589 aa7.45□□□□□ -1.22
COPS3-208ENST00000486032 THRAP3Q9Y2W1 955 aaKnown RBP7.45□□□□□ -1.22
COPS3-208ENST00000486032 SALL2Q9Y467 1007 aaPredicted RBP7.45□□□□□ -1.22
COPS3-208ENST00000486032 MAPK8IP3Q9UPT6 1336 aa7.45□□□□□ -1.22
COPS3-208ENST00000486032 DOT1LQ8TEK3 1739 aa7.44□□□□□ -1.22
COPS3-208ENST00000486032 DPYSL4O14531 572 aa7.44□□□□□ -1.22
COPS3-208ENST00000486032 TRIM37O94972 964 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms