RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 SETDB2Q96T68 719 aa16.13■□□□□ 0.17
HMG20B-211ENST00000486028 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
HMG20B-211ENST00000486028 SERPINB2P05120 415 aa16.12■□□□□ 0.17
HMG20B-211ENST00000486028 TGFB2P61812 414 aa16.12■□□□□ 0.17
HMG20B-211ENST00000486028 PDIA6Q15084 440 aa16.12■□□□□ 0.17
HMG20B-211ENST00000486028 DDX21Q9NR30 783 aaKnown RBP eCLIP16.12■□□□□ 0.17
HMG20B-211ENST00000486028 LAMB4A4D0S4 1761 aa16.12■□□□□ 0.17
HMG20B-211ENST00000486028 ERVV-1B6SEH8 477 aa16.11■□□□□ 0.17
HMG20B-211ENST00000486028 GPR162Q16538 588 aa16.11■□□□□ 0.17
HMG20B-211ENST00000486028 TSR2Q969E8 191 aaKnown RBP16.11■□□□□ 0.17
HMG20B-211ENST00000486028 ELL2O00472 640 aaPredicted RBP16.1■□□□□ 0.17
HMG20B-211ENST00000486028 PROSER3Q2NL68 480 aa16.1■□□□□ 0.17
HMG20B-211ENST00000486028 TTLL7Q6ZT98 887 aa16.1■□□□□ 0.17
HMG20B-211ENST00000486028 PELP1Q8IZL8 1130 aaKnown RBP16.1■□□□□ 0.17
HMG20B-211ENST00000486028 C8orf58Q8NAV2 365 aa16.1■□□□□ 0.17
HMG20B-211ENST00000486028 DBF4Q9UBU7 674 aaPredicted RBP16.1■□□□□ 0.17
HMG20B-211ENST00000486028 MAP3K15Q6ZN16 1313 aa16.1■□□□□ 0.17
HMG20B-211ENST00000486028 ANXA1P04083 346 aa16.09■□□□□ 0.17
HMG20B-211ENST00000486028 LRP10Q7Z4F1 713 aa16.09■□□□□ 0.17
HMG20B-211ENST00000486028 CHPF2Q9P2E5 772 aa16.09■□□□□ 0.17
HMG20B-211ENST00000486028 CARMIL3Q8ND23 1372 aa16.09■□□□□ 0.17
HMG20B-211ENST00000486028 C10orf71Q711Q0 1435 aa16.09■□□□□ 0.17
HMG20B-211ENST00000486028 A0A0G2JLW4 131 aa16.08■□□□□ 0.16
HMG20B-211ENST00000486028 GOLGA2Q08379 1002 aa16.08■□□□□ 0.16
HMG20B-211ENST00000486028 HLFQ16534 295 aa16.08■□□□□ 0.16
HMG20B-211ENST00000486028 COPS6Q7L5N1 327 aa16.08■□□□□ 0.16
HMG20B-211ENST00000486028 ZBTB3Q9H5J0 574 aa16.08■□□□□ 0.16
HMG20B-211ENST00000486028 HYPKQ9NX55 129 aa16.08■□□□□ 0.16
HMG20B-211ENST00000486028 NIP7Q9Y221 180 aaKnown RBP eCLIP16.08■□□□□ 0.16
HMG20B-211ENST00000486028 NPHP1O15259 732 aa16.07■□□□□ 0.16
HMG20B-211ENST00000486028 AIMP1Q12904 312 aaKnown RBP16.07■□□□□ 0.16
HMG20B-211ENST00000486028 CCDC30Q5VVM6 783 aa16.07■□□□□ 0.16
HMG20B-211ENST00000486028 XAGE3Q8WTP9 111 aa16.07■□□□□ 0.16
HMG20B-211ENST00000486028 MYH16Q9H6N6 1097 aa16.07■□□□□ 0.16
HMG20B-211ENST00000486028 SCN7AQ01118 1682 aa16.06■□□□□ 0.16
HMG20B-211ENST00000486028 DPEP1P16444 411 aa16.06■□□□□ 0.16
HMG20B-211ENST00000486028 NBPF5PQ86XG9 351 aaPredicted RBP16.06■□□□□ 0.16
HMG20B-211ENST00000486028 TSPYL6Q8N831 410 aa16.06■□□□□ 0.16
HMG20B-211ENST00000486028 CNBD1Q8NA66 436 aa16.06■□□□□ 0.16
HMG20B-211ENST00000486028 FANCIQ9NVI1 1328 aa16.05■□□□□ 0.16
HMG20B-211ENST00000486028 GRIN3BO60391 1043 aa16.05■□□□□ 0.16
HMG20B-211ENST00000486028 TWISTNBQ3B726 338 aaPredicted RBP16.05■□□□□ 0.16
HMG20B-211ENST00000486028 TPTE2Q6XPS3 522 aa16.05■□□□□ 0.16
HMG20B-211ENST00000486028 GIGYF2Q6Y7W6 1299 aaKnown RBP16.05■□□□□ 0.16
HMG20B-211ENST00000486028 BRIP1Q9BX63 1249 aa16.05■□□□□ 0.16
HMG20B-211ENST00000486028 ZNF521Q96K83 1311 aa16.04■□□□□ 0.16
HMG20B-211ENST00000486028 ST5P78524 1137 aa16.04■□□□□ 0.16
HMG20B-211ENST00000486028 PRR5LQ6MZQ0 368 aa16.04■□□□□ 0.16
HMG20B-211ENST00000486028 PXDNLA1KZ92 1463 aa16.03■□□□□ 0.16
HMG20B-211ENST00000486028 YBX3P16989 372 aaKnown RBP eCLIP16.03■□□□□ 0.16
HMG20B-211ENST00000486028 PDE6BP35913 854 aa16.03■□□□□ 0.16
HMG20B-211ENST00000486028 HSP90AB3PQ58FF7 597 aa16.03■□□□□ 0.16
HMG20B-211ENST00000486028 ANKRD13DQ6ZTN6 518 aa16.03■□□□□ 0.16
HMG20B-211ENST00000486028 STK31Q9BXU1 1019 aa16.03■□□□□ 0.16
HMG20B-211ENST00000486028 NYXQ9GZU5 481 aa16.03■□□□□ 0.16
HMG20B-211ENST00000486028 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
HMG20B-211ENST00000486028 PIM2Q9P1W9 311 aa16.03■□□□□ 0.16
HMG20B-211ENST00000486028 WWC3Q9ULE0 1092 aa16.03■□□□□ 0.16
HMG20B-211ENST00000486028 PDZRN3Q9UPQ7 1066 aa16.03■□□□□ 0.16
HMG20B-211ENST00000486028 BCORQ6W2J9 1755 aa16.03■□□□□ 0.16
HMG20B-211ENST00000486028 FAM177BA6PVY3 158 aa16.02■□□□□ 0.16
HMG20B-211ENST00000486028 H0YIN7 160 aa16.02■□□□□ 0.16
HMG20B-211ENST00000486028 KCNA3P22001 575 aa16.02■□□□□ 0.16
HMG20B-211ENST00000486028 GPTP24298 496 aa16.02■□□□□ 0.16
HMG20B-211ENST00000486028 GTF2E1P29083 439 aaPredicted RBP16.02■□□□□ 0.16
HMG20B-211ENST00000486028 CHRNA5P30532 468 aa16.02■□□□□ 0.16
HMG20B-211ENST00000486028 C2CD5Q86YS7 1000 aa16.02■□□□□ 0.16
HMG20B-211ENST00000486028 ZNF34Q8IZ26 560 aa16.02■□□□□ 0.16
HMG20B-211ENST00000486028 CCDC24Q8N4L8 307 aa16.02■□□□□ 0.16
HMG20B-211ENST00000486028 PLBD2Q8NHP8 589 aa16.02■□□□□ 0.16
HMG20B-211ENST00000486028 KIF13BQ9NQT8 1826 aa16.02■□□□□ 0.16
HMG20B-211ENST00000486028 ATP10DQ9P241 1426 aa16.02■□□□□ 0.15
HMG20B-211ENST00000486028 EXOSC9Q06265 439 aaKnown RBP16.01■□□□□ 0.15
HMG20B-211ENST00000486028 PARP10Q53GL7 1025 aa16.01■□□□□ 0.15
HMG20B-211ENST00000486028 NRXN2Q9P2S2 1712 aa16■□□□□ 0.15
HMG20B-211ENST00000486028 E9PSI1 815 aa16■□□□□ 0.15
HMG20B-211ENST00000486028 VAMP4O75379 141 aa16■□□□□ 0.15
HMG20B-211ENST00000486028 TCIRG1Q13488 830 aa16■□□□□ 0.15
HMG20B-211ENST00000486028 DALRD3Q5D0E6 543 aaKnown RBP16■□□□□ 0.15
HMG20B-211ENST00000486028 PPP1R42Q7Z4L9 355 aa16■□□□□ 0.15
HMG20B-211ENST00000486028 BCS1LQ9Y276 419 aa16■□□□□ 0.15
HMG20B-211ENST00000486028 AFDNP55196 1824 aaKnown RBP16■□□□□ 0.15
HMG20B-211ENST00000486028 TCERG1O14776 1098 aaKnown RBP15.99■□□□□ 0.15
HMG20B-211ENST00000486028 SUSD4Q5VX71 490 aa15.99■□□□□ 0.15
HMG20B-211ENST00000486028 RIC3Q7Z5B4 369 aa15.99■□□□□ 0.15
HMG20B-211ENST00000486028 PHAXQ9H814 394 aaKnown RBP15.99■□□□□ 0.15
HMG20B-211ENST00000486028 UBN2Q6ZU65 1347 aa15.98■□□□□ 0.15
HMG20B-211ENST00000486028 DDX58O95786 925 aaKnown RBP15.98■□□□□ 0.15
HMG20B-211ENST00000486028 UTP14AQ9BVJ6 771 aaKnown RBP15.98■□□□□ 0.15
HMG20B-211ENST00000486028 NUP98P52948 1817 aa15.97■□□□□ 0.15
HMG20B-211ENST00000486028 SLFN5Q08AF3 891 aa15.97■□□□□ 0.15
HMG20B-211ENST00000486028 TTLL6Q8N841 843 aa15.97■□□□□ 0.15
HMG20B-211ENST00000486028 ZNF622Q969S3 477 aaKnown RBP eCLIP15.97■□□□□ 0.155e-11■□□□□ 10.6
HMG20B-211ENST00000486028 GOLGB1Q14789 3259 aaKnown RBP15.97■□□□□ 0.15
HMG20B-211ENST00000486028 N4BP2Q86UW6 1770 aaPredicted RBP15.97■□□□□ 0.15
HMG20B-211ENST00000486028 IBTKQ9P2D0 1353 aaPredicted RBP15.97■□□□□ 0.15
HMG20B-211ENST00000486028 ERFEQ4G0M1 354 aa15.96■□□□□ 0.15
HMG20B-211ENST00000486028 NLRP10Q86W26 655 aa15.96■□□□□ 0.15
HMG20B-211ENST00000486028 NUTM1Q86Y26 1132 aa15.96■□□□□ 0.15
HMG20B-211ENST00000486028 KIAA1551Q9HCM1 1747 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms