RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-211ENST00000485967 CHPF2Q9P2E5 772 aa17.79■□□□□ 0.44
SCAP-211ENST00000485967 SRP68Q9UHB9 627 aaKnown RBP17.79■□□□□ 0.44
SCAP-211ENST00000485967 NARFQ9UHQ1 456 aa17.79■□□□□ 0.44
SCAP-211ENST00000485967 VAMP4O75379 141 aa17.78■□□□□ 0.44
SCAP-211ENST00000485967 KIF6Q6ZMV9 814 aa17.78■□□□□ 0.44
SCAP-211ENST00000485967 NLGN1Q8N2Q7 840 aa17.78■□□□□ 0.44
SCAP-211ENST00000485967 LAMB4A4D0S4 1761 aa17.78■□□□□ 0.44
SCAP-211ENST00000485967 KIF13BQ9NQT8 1826 aa17.77■□□□□ 0.44
SCAP-211ENST00000485967 USP42Q9H9J4 1324 aaKnown RBP17.77■□□□□ 0.44
SCAP-211ENST00000485967 TCERG1O14776 1098 aaKnown RBP17.77■□□□□ 0.44
SCAP-211ENST00000485967 AIMP1Q12904 312 aaKnown RBP17.77■□□□□ 0.44
SCAP-211ENST00000485967 PDIA6Q15084 440 aa17.77■□□□□ 0.44
SCAP-211ENST00000485967 PROSER3Q2NL68 480 aa17.77■□□□□ 0.44
SCAP-211ENST00000485967 TRMT2AQ8IZ69 625 aaKnown RBP17.77■□□□□ 0.44
SCAP-211ENST00000485967 YTHDC1Q96MU7 727 aaKnown RBP17.77■□□□□ 0.44
SCAP-211ENST00000485967 HYPKQ9NX55 129 aa17.77■□□□□ 0.44
SCAP-211ENST00000485967 KIAA1551Q9HCM1 1747 aa17.77■□□□□ 0.44
SCAP-211ENST00000485967 GYS1P13807 737 aa17.76■□□□□ 0.43
SCAP-211ENST00000485967 COPS6Q7L5N1 327 aa17.75■□□□□ 0.43
SCAP-211ENST00000485967 XAGE3Q8WTP9 111 aa17.75■□□□□ 0.43
SCAP-211ENST00000485967 C4AP0C0L4 1744 aa17.75■□□□□ 0.43
SCAP-211ENST00000485967 FKBP8Q14318 412 aa17.74■□□□□ 0.43
SCAP-211ENST00000485967 TTLL7Q6ZT98 887 aa17.74■□□□□ 0.43
SCAP-211ENST00000485967 ZNF652Q9Y2D9 606 aa17.74■□□□□ 0.43
SCAP-211ENST00000485967 CAMTA2O94983 1202 aa17.73■□□□□ 0.43
SCAP-211ENST00000485967 SLC4A2P04920 1241 aa17.73■□□□□ 0.43
SCAP-211ENST00000485967 ZBTB3Q9H5J0 574 aa17.73■□□□□ 0.43
SCAP-211ENST00000485967 PXDNLA1KZ92 1463 aa17.73■□□□□ 0.43
SCAP-211ENST00000485967 MMP10P09238 476 aa17.72■□□□□ 0.43
SCAP-211ENST00000485967 BICDL1Q6ZP65 573 aa17.72■□□□□ 0.43
SCAP-211ENST00000485967 PARP3Q9Y6F1 533 aa17.72■□□□□ 0.43
SCAP-211ENST00000485967 C10orf71Q711Q0 1435 aa17.72■□□□□ 0.43
SCAP-211ENST00000485967 MAP3K15Q6ZN16 1313 aa17.72■□□□□ 0.43
SCAP-211ENST00000485967 ERVV-1B6SEH8 477 aa17.71■□□□□ 0.43
SCAP-211ENST00000485967 CT47B1P0C2W7 299 aaPredicted RBP17.71■□□□□ 0.43
SCAP-211ENST00000485967 CLEC4GQ6UXB4 293 aa17.71■□□□□ 0.43
SCAP-211ENST00000485967 LRP10Q7Z4F1 713 aa17.71■□□□□ 0.43
SCAP-211ENST00000485967 PHAXQ9H814 394 aaKnown RBP17.71■□□□□ 0.43
SCAP-211ENST00000485967 BCL2L12Q9HB09 334 aa17.71■□□□□ 0.43
SCAP-211ENST00000485967 WWC3Q9ULE0 1092 aa17.71■□□□□ 0.43
SCAP-211ENST00000485967 DDX58O95786 925 aaKnown RBP17.7■□□□□ 0.42
SCAP-211ENST00000485967 ANKRD13DQ6ZTN6 518 aa17.7■□□□□ 0.42
SCAP-211ENST00000485967 ZNF428Q96B54 188 aa17.7■□□□□ 0.42
SCAP-211ENST00000485967 N4BP2Q86UW6 1770 aaPredicted RBP17.69■□□□□ 0.42
SCAP-211ENST00000485967 HLFQ16534 295 aa17.69■□□□□ 0.42
SCAP-211ENST00000485967 TBC1D9BQ66K14 1250 aa17.69■□□□□ 0.42
SCAP-211ENST00000485967 RIC3Q7Z5B4 369 aa17.69■□□□□ 0.42
SCAP-211ENST00000485967 PLBD2Q8NHP8 589 aa17.69■□□□□ 0.42
SCAP-211ENST00000485967 SETDB2Q96T68 719 aa17.69■□□□□ 0.42
SCAP-211ENST00000485967 BRCA1P38398 1863 aaKnown RBP17.69■□□□□ 0.42
SCAP-211ENST00000485967 RGL2O15211 777 aa17.68■□□□□ 0.42
SCAP-211ENST00000485967 TM4SF1P30408 202 aa17.68■□□□□ 0.42
SCAP-211ENST00000485967 NFIXQ14938 502 aa17.68■□□□□ 0.42
SCAP-211ENST00000485967 GIGYF2Q6Y7W6 1299 aaKnown RBP17.68■□□□□ 0.42
SCAP-211ENST00000485967 NPHP1O15259 732 aa17.67■□□□□ 0.42
SCAP-211ENST00000485967 HSP90AB3PQ58FF7 597 aa17.67■□□□□ 0.42
SCAP-211ENST00000485967 GPBP1L1Q9HC44 474 aaPredicted RBP17.67■□□□□ 0.42
SCAP-211ENST00000485967 NIP7Q9Y221 180 aaKnown RBP eCLIP17.67■□□□□ 0.42
SCAP-211ENST00000485967 FLIIQ13045 1269 aa17.66■□□□□ 0.42
SCAP-211ENST00000485967 FKBP5Q13451 457 aaPredicted RBP17.66■□□□□ 0.42
SCAP-211ENST00000485967 ALDH1L2Q3SY69 923 aa17.66■□□□□ 0.42
SCAP-211ENST00000485967 G2E3Q7L622 706 aa17.66■□□□□ 0.42
SCAP-211ENST00000485967 SERPINB2P05120 415 aa17.65■□□□□ 0.42
SCAP-211ENST00000485967 SSH1Q8WYL5 1049 aa17.65■□□□□ 0.42
SCAP-211ENST00000485967 SMC4Q9NTJ3 1288 aa17.65■□□□□ 0.42
SCAP-211ENST00000485967 FAM177BA6PVY3 158 aa17.64■□□□□ 0.41
SCAP-211ENST00000485967 POLRMTO00411 1230 aaKnown RBP17.64■□□□□ 0.41
SCAP-211ENST00000485967 GPTP24298 496 aa17.64■□□□□ 0.41
SCAP-211ENST00000485967 DDR1Q08345 913 aa17.64■□□□□ 0.41
SCAP-211ENST00000485967 TCIRG1Q13488 830 aa17.64■□□□□ 0.41
SCAP-211ENST00000485967 KSR2Q6VAB6 950 aa17.64■□□□□ 0.41
SCAP-211ENST00000485967 MRPL50Q8N5N7 158 aaKnown RBP17.64■□□□□ 0.41
SCAP-211ENST00000485967 BCL2L13Q9BXK5 485 aa17.64■□□□□ 0.41
SCAP-211ENST00000485967 PI4KAP2A4QPH2 592 aa17.63■□□□□ 0.41
SCAP-211ENST00000485967 GTF2E1P29083 439 aaPredicted RBP17.63■□□□□ 0.41
SCAP-211ENST00000485967 NBPF5PQ86XG9 351 aaPredicted RBP17.63■□□□□ 0.41
SCAP-211ENST00000485967 PI4KAP1Q8N8J0 262 aa17.63■□□□□ 0.41
SCAP-211ENST00000485967 ZNF526Q8TF50 670 aaPredicted RBP17.63■□□□□ 0.41
SCAP-211ENST00000485967 MAP3K2Q9Y2U5 619 aa17.63■□□□□ 0.41
SCAP-211ENST00000485967 RARSP54136 660 aaKnown RBP17.62■□□□□ 0.41
SCAP-211ENST00000485967 TGFB2P61812 414 aa17.62■□□□□ 0.41
SCAP-211ENST00000485967 NEXNQ0ZGT2 675 aa17.62■□□□□ 0.41
SCAP-211ENST00000485967 TPTE2Q6XPS3 522 aa17.62■□□□□ 0.41
SCAP-211ENST00000485967 ZNF34Q8IZ26 560 aa17.62■□□□□ 0.41
SCAP-211ENST00000485967 CARMIL3Q8ND23 1372 aa17.62■□□□□ 0.41
SCAP-211ENST00000485967 SCN7AQ01118 1682 aa17.61■□□□□ 0.41
SCAP-211ENST00000485967 ARFGEF1Q9Y6D6 1849 aa17.61■□□□□ 0.41
SCAP-211ENST00000485967 PARP10Q53GL7 1025 aa17.61■□□□□ 0.41
SCAP-211ENST00000485967 PPP1R42Q7Z4L9 355 aa17.61■□□□□ 0.41
SCAP-211ENST00000485967 MYD88Q99836 296 aa17.61■□□□□ 0.41
SCAP-211ENST00000485967 ATP5J2-PTCD1G3V325 749 aa17.6■□□□□ 0.41
SCAP-211ENST00000485967 CNBD1Q8NA66 436 aa17.6■□□□□ 0.41
SCAP-211ENST00000485967 METTL22Q9BUU2 404 aaPredicted RBP17.6■□□□□ 0.41
SCAP-211ENST00000485967 NYXQ9GZU5 481 aa17.6■□□□□ 0.41
SCAP-211ENST00000485967 BCORQ6W2J9 1755 aa17.6■□□□□ 0.41
SCAP-211ENST00000485967 CACNA1FO60840 1977 aa17.6■□□□□ 0.41
SCAP-211ENST00000485967 A0A0G2JLW4 131 aa17.59■□□□□ 0.41
SCAP-211ENST00000485967 ST5P78524 1137 aa17.59■□□□□ 0.41
SCAP-211ENST00000485967 SUSD4Q5VX71 490 aa17.59■□□□□ 0.41
SCAP-211ENST00000485967 DNAAF4Q8WXU2 420 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms