RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 KIF6Q6ZMV9 814 aa24■■□□□ 1.43
COL1A1-206ENST00000485870 TTLL7Q6ZT98 887 aa24■■□□□ 1.43
COL1A1-206ENST00000485870 CALD1Q05682 793 aaKnown RBP23.99■■□□□ 1.43
COL1A1-206ENST00000485870 CNBD1Q8NA66 436 aa23.99■■□□□ 1.43
COL1A1-206ENST00000485870 MBIPQ9NS73 344 aa23.99■■□□□ 1.43
COL1A1-206ENST00000485870 NIP7Q9Y221 180 aaKnown RBP eCLIP23.99■■□□□ 1.43
COL1A1-206ENST00000485870 ANKRD31Q8N7Z5 1873 aa23.98■■□□□ 1.43
COL1A1-206ENST00000485870 ANXA1P04083 346 aa23.98■■□□□ 1.43
COL1A1-206ENST00000485870 PDIA6Q15084 440 aa23.98■■□□□ 1.43
COL1A1-206ENST00000485870 PROSER3Q2NL68 480 aa23.98■■□□□ 1.43
COL1A1-206ENST00000485870 DALRD3Q5D0E6 543 aaKnown RBP23.98■■□□□ 1.43
COL1A1-206ENST00000485870 IFT57Q9NWB7 429 aa23.98■■□□□ 1.43
COL1A1-206ENST00000485870 MAP3K15Q6ZN16 1313 aa23.98■■□□□ 1.43
COL1A1-206ENST00000485870 RGL2O15211 777 aa23.97■■□□□ 1.43
COL1A1-206ENST00000485870 ZNF853P0CG23 659 aa23.97■■□□□ 1.43
COL1A1-206ENST00000485870 NBPF5PQ86XG9 351 aaPredicted RBP23.97■■□□□ 1.43
COL1A1-206ENST00000485870 C2CD5Q86YS7 1000 aa23.97■■□□□ 1.43
COL1A1-206ENST00000485870 ZNF784Q8NCA9 323 aaPredicted RBP23.97■■□□□ 1.43
COL1A1-206ENST00000485870 ZBTB3Q9H5J0 574 aa23.97■■□□□ 1.43
COL1A1-206ENST00000485870 FAM177BA6PVY3 158 aa23.96■■□□□ 1.43
COL1A1-206ENST00000485870 GNAI1P63096 354 aa23.96■■□□□ 1.43
COL1A1-206ENST00000485870 ST5P78524 1137 aa23.96■■□□□ 1.43
COL1A1-206ENST00000485870 NUP98P52948 1817 aa23.96■■□□□ 1.43
COL1A1-206ENST00000485870 ARFGEF1Q9Y6D6 1849 aa23.96■■□□□ 1.43
COL1A1-206ENST00000485870 DLEC1Q9Y238 1755 aa23.96■■□□□ 1.43
COL1A1-206ENST00000485870 ERVV-1B6SEH8 477 aa23.95■■□□□ 1.42
COL1A1-206ENST00000485870 LRP10Q7Z4F1 713 aa23.95■■□□□ 1.42
COL1A1-206ENST00000485870 BRIP1Q9BX63 1249 aa23.95■■□□□ 1.42
COL1A1-206ENST00000485870 H0YIN7 160 aa23.94■■□□□ 1.42
COL1A1-206ENST00000485870 HDGFL1Q5TGJ6 251 aa23.94■■□□□ 1.42
COL1A1-206ENST00000485870 ARHGAP27Q6ZUM4 889 aa23.94■■□□□ 1.42
COL1A1-206ENST00000485870 PDE6BP35913 854 aa23.93■■□□□ 1.42
COL1A1-206ENST00000485870 DUSP27Q5VZP5 1158 aa23.93■■□□□ 1.42
COL1A1-206ENST00000485870 FAM9BQ8IZU0 186 aa23.93■■□□□ 1.42
COL1A1-206ENST00000485870 COL11A2P13942 1736 aaPredicted RBP23.93■■□□□ 1.42
COL1A1-206ENST00000485870 HOXB7P09629 217 aa23.92■■□□□ 1.42
COL1A1-206ENST00000485870 DDX21Q9NR30 783 aaKnown RBP eCLIP23.92■■□□□ 1.42
COL1A1-206ENST00000485870 CHPF2Q9P2E5 772 aa23.92■■□□□ 1.42
COL1A1-206ENST00000485870 ATP10DQ9P241 1426 aa23.92■■□□□ 1.42
COL1A1-206ENST00000485870 GPTP24298 496 aa23.91■■□□□ 1.42
COL1A1-206ENST00000485870 AIMP1Q12904 312 aaKnown RBP23.91■■□□□ 1.42
COL1A1-206ENST00000485870 CCDC27Q2M243 656 aa23.91■■□□□ 1.42
COL1A1-206ENST00000485870 TPTE2Q6XPS3 522 aa23.91■■□□□ 1.42
COL1A1-206ENST00000485870 WWC1Q8IX03 1113 aa23.91■■□□□ 1.42
COL1A1-206ENST00000485870 ZNF622Q969S3 477 aaKnown RBP eCLIP23.91■■□□□ 1.42
COL1A1-206ENST00000485870 TTLL6Q8N841 843 aa23.9■■□□□ 1.42
COL1A1-206ENST00000485870 XAGE3Q8WTP9 111 aa23.9■■□□□ 1.42
COL1A1-206ENST00000485870 PDZRN3Q9UPQ7 1066 aa23.9■■□□□ 1.42
COL1A1-206ENST00000485870 SALL2Q9Y467 1007 aaPredicted RBP23.9■■□□□ 1.42
COL1A1-206ENST00000485870 ELL2O00472 640 aaPredicted RBP23.89■■□□□ 1.41
COL1A1-206ENST00000485870 GIGYF2Q6Y7W6 1299 aaKnown RBP23.89■■□□□ 1.41
COL1A1-206ENST00000485870 COPS6Q7L5N1 327 aa23.89■■□□□ 1.41
COL1A1-206ENST00000485870 GTF2E1P29083 439 aaPredicted RBP23.88■■□□□ 1.41
COL1A1-206ENST00000485870 UBN2Q6ZU65 1347 aa23.87■■□□□ 1.41
COL1A1-206ENST00000485870 TSR2Q969E8 191 aaKnown RBP23.87■■□□□ 1.41
COL1A1-206ENST00000485870 NUTM1Q86Y26 1132 aa23.86■■□□□ 1.41
COL1A1-206ENST00000485870 ZNF34Q8IZ26 560 aa23.86■■□□□ 1.41
COL1A1-206ENST00000485870 C8orf58Q8NAV2 365 aa23.86■■□□□ 1.41
COL1A1-206ENST00000485870 NYXQ9GZU5 481 aa23.86■■□□□ 1.41
COL1A1-206ENST00000485870 DBF4Q9UBU7 674 aaPredicted RBP23.86■■□□□ 1.41
COL1A1-206ENST00000485870 ADCY9O60503 1353 aa23.86■■□□□ 1.41
COL1A1-206ENST00000485870 SRGNP10124 158 aa23.85■■□□□ 1.41
COL1A1-206ENST00000485870 CACNA1SQ13698 1873 aa23.84■■□□□ 1.41
COL1A1-206ENST00000485870 ABCC12Q96J65 1359 aa23.84■■□□□ 1.41
COL1A1-206ENST00000485870 NCBP3Q53F19 620 aaKnown RBP23.84■■□□□ 1.41
COL1A1-206ENST00000485870 SUSD4Q5VX71 490 aa23.84■■□□□ 1.41
COL1A1-206ENST00000485870 ZNF219Q9P2Y4 722 aaPredicted RBP23.84■■□□□ 1.41
COL1A1-206ENST00000485870 ERFEQ4G0M1 354 aa23.83■■□□□ 1.41
COL1A1-206ENST00000485870 STYK1Q6J9G0 422 aa23.83■■□□□ 1.41
COL1A1-206ENST00000485870 MASTLQ96GX5 879 aa23.83■■□□□ 1.41
COL1A1-206ENST00000485870 IL16Q14005 1332 aa23.83■■□□□ 1.4
COL1A1-206ENST00000485870 PARP10Q53GL7 1025 aa23.82■■□□□ 1.4
COL1A1-206ENST00000485870 TSPYL6Q8N831 410 aa23.82■■□□□ 1.4
COL1A1-206ENST00000485870 HYPKQ9NX55 129 aa23.82■■□□□ 1.4
COL1A1-206ENST00000485870 ANKRD36CQ5JPF3 1778 aa23.82■■□□□ 1.4
COL1A1-206ENST00000485870 TNRC6CQ9HCJ0 1690 aaKnown RBP23.82■■□□□ 1.4
COL1A1-206ENST00000485870 IBTKQ9P2D0 1353 aaPredicted RBP23.81■■□□□ 1.4
COL1A1-206ENST00000485870 RASSF7Q02833 373 aa23.81■■□□□ 1.4
COL1A1-206ENST00000485870 ZNF526Q8TF50 670 aaPredicted RBP23.81■■□□□ 1.4
COL1A1-206ENST00000485870 CNKSR1Q969H4 720 aa23.81■■□□□ 1.4
COL1A1-206ENST00000485870 SLX4Q8IY92 1834 aa23.8■■□□□ 1.4
COL1A1-206ENST00000485870 C21orf2O43822 256 aa23.8■■□□□ 1.4
COL1A1-206ENST00000485870 NTSR2O95665 410 aa23.8■■□□□ 1.4
COL1A1-206ENST00000485870 HSP90AB3PQ58FF7 597 aa23.8■■□□□ 1.4
COL1A1-206ENST00000485870 C9orf131Q5VYM1 1079 aa23.8■■□□□ 1.4
COL1A1-206ENST00000485870 PPP1R42Q7Z4L9 355 aa23.8■■□□□ 1.4
COL1A1-206ENST00000485870 KLRG2A4D1S0 409 aaPredicted RBP23.79■■□□□ 1.4
COL1A1-206ENST00000485870 NPR1P16066 1061 aa23.79■■□□□ 1.4
COL1A1-206ENST00000485870 PRPF40BQ6NWY9 871 aaKnown RBP23.79■■□□□ 1.4
COL1A1-206ENST00000485870 PLBD2Q8NHP8 589 aa23.79■■□□□ 1.4
COL1A1-206ENST00000485870 ARFGEF2Q9Y6D5 1785 aa23.78■■□□□ 1.4
COL1A1-206ENST00000485870 TCIRG1Q13488 830 aa23.78■■□□□ 1.4
COL1A1-206ENST00000485870 ANKRD13DQ6ZTN6 518 aa23.78■■□□□ 1.4
COL1A1-206ENST00000485870 UTP14AQ9BVJ6 771 aaKnown RBP23.78■■□□□ 1.4
COL1A1-206ENST00000485870 RNF181Q9P0P0 153 aa23.78■■□□□ 1.4
COL1A1-206ENST00000485870 SBF1O95248 1867 aa23.78■■□□□ 1.4
COL1A1-206ENST00000485870 CCDC30Q5VVM6 783 aa23.77■■□□□ 1.4
COL1A1-206ENST00000485870 WDR63Q8IWG1 891 aa23.77■■□□□ 1.4
COL1A1-206ENST00000485870 PHAXQ9H814 394 aaKnown RBP23.77■■□□□ 1.4
COL1A1-206ENST00000485870 FANCIQ9NVI1 1328 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms