RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 FIGNL1Q6PIW4 674 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 RRAGCQ9HB90 399 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 KIAA1522Q9P206 1035 aaPredicted RBP6.34□□□□□ -1.39
RTN4-213ENST00000485749 MKRN1Q9UHC7 482 aaKnown RBP6.34□□□□□ -1.39
RTN4-213ENST00000485749 PIK3CDO00329 1044 aa6.33□□□□□ -1.4
RTN4-213ENST00000485749 BMP4P12644 408 aa6.33□□□□□ -1.4
RTN4-213ENST00000485749 AMPD1P23109 780 aa6.33□□□□□ -1.4
RTN4-213ENST00000485749 VAMP1P23763 118 aa6.33□□□□□ -1.4
RTN4-213ENST00000485749 CERS3Q8IU89 383 aa6.33□□□□□ -1.4
RTN4-213ENST00000485749 EDARADDQ8WWZ3 215 aa6.33□□□□□ -1.4
RTN4-213ENST00000485749 XAGE2Q96GT9 111 aa6.33□□□□□ -1.4
RTN4-213ENST00000485749 GPAMQ9HCL2 828 aa6.33□□□□□ -1.4
RTN4-213ENST00000485749 RAB6BQ9NRW1 208 aa6.33□□□□□ -1.4
RTN4-213ENST00000485749 K7ELQ4 463 aaPredicted RBP6.32□□□□□ -1.4
RTN4-213ENST00000485749 SLFNL1Q499Z3 407 aa6.32□□□□□ -1.4
RTN4-213ENST00000485749 RNF135Q8IUD6 432 aa6.32□□□□□ -1.4
RTN4-213ENST00000485749 RHBDD1Q8TEB9 315 aa6.32□□□□□ -1.4
RTN4-213ENST00000485749 KLRG1Q96E93 195 aa6.32□□□□□ -1.4
RTN4-213ENST00000485749 BCL2L13Q9BXK5 485 aa6.32□□□□□ -1.4
RTN4-213ENST00000485749 NOP53Q9NZM5 478 aaKnown RBP6.32□□□□□ -1.4
RTN4-213ENST00000485749 CEP126Q9P2H0 1117 aa6.32□□□□□ -1.4
RTN4-213ENST00000485749 IL2RAP01589 272 aa6.31□□□□□ -1.4
RTN4-213ENST00000485749 RASA1P20936 1047 aa6.31□□□□□ -1.4
RTN4-213ENST00000485749 PHKA2P46019 1235 aa6.31□□□□□ -1.4
RTN4-213ENST00000485749 MAP7D1Q3KQU3 841 aa6.31□□□□□ -1.4
RTN4-213ENST00000485749 CRTC2Q53ET0 693 aaPredicted RBP6.31□□□□□ -1.4
RTN4-213ENST00000485749 ANKMY2Q8IV38 441 aa6.31□□□□□ -1.4
RTN4-213ENST00000485749 NAP1L5Q96NT1 182 aaPredicted RBP6.31□□□□□ -1.4
RTN4-213ENST00000485749 EGFL7Q9UHF1 273 aa6.31□□□□□ -1.4
RTN4-213ENST00000485749 CHIC2Q9UKJ5 165 aa6.31□□□□□ -1.4
RTN4-213ENST00000485749 PROCP04070 461 aa6.3□□□□□ -1.4
RTN4-213ENST00000485749 ATP2B4P23634 1241 aa6.3□□□□□ -1.4
RTN4-213ENST00000485749 CANXP27824 592 aaKnown RBP6.3□□□□□ -1.4
RTN4-213ENST00000485749 ZEB1P37275 1124 aaPredicted RBP6.3□□□□□ -1.4
RTN4-213ENST00000485749 SLCO4C1Q6ZQN7 724 aa6.3□□□□□ -1.4
RTN4-213ENST00000485749 TRIM50Q86XT4 487 aa6.3□□□□□ -1.4
RTN4-213ENST00000485749 PHTF2Q8N3S3 785 aa6.3□□□□□ -1.4
RTN4-213ENST00000485749 SLAIN2Q9P270 581 aa6.3□□□□□ -1.4
RTN4-213ENST00000485749 DOLKQ9UPQ8 538 aa6.3□□□□□ -1.4
RTN4-213ENST00000485749 GNB5O14775 395 aa6.29□□□□□ -1.4
RTN4-213ENST00000485749 FGFR3P22607 806 aa6.29□□□□□ -1.4
RTN4-213ENST00000485749 MSX1P28360 303 aa6.29□□□□□ -1.4
RTN4-213ENST00000485749 C4orf17Q53FE4 359 aa6.29□□□□□ -1.4
RTN4-213ENST00000485749 NOM1Q5C9Z4 860 aaKnown RBP6.29□□□□□ -1.4
RTN4-213ENST00000485749 PPARGC1BQ86YN6 1023 aaKnown RBP6.29□□□□□ -1.4
RTN4-213ENST00000485749 C8orf37Q96NL8 207 aa6.29□□□□□ -1.4
RTN4-213ENST00000485749 CRISPLD1Q9H336 500 aa6.29□□□□□ -1.4
RTN4-213ENST00000485749 BRPF3Q9ULD4 1205 aa6.29□□□□□ -1.4
RTN4-213ENST00000485749 ARAFP10398 606 aa6.28□□□□□ -1.4
RTN4-213ENST00000485749 TCF3P15923 654 aa6.28□□□□□ -1.4
RTN4-213ENST00000485749 ATP1A2P50993 1020 aa6.28□□□□□ -1.4
RTN4-213ENST00000485749 NCOA4Q13772 614 aa6.28□□□□□ -1.4
RTN4-213ENST00000485749 COL19A1Q14993 1142 aa6.28□□□□□ -1.4
RTN4-213ENST00000485749 TLR1Q15399 786 aa6.28□□□□□ -1.4
RTN4-213ENST00000485749 NLRP8Q86W28 1048 aa6.28□□□□□ -1.4
RTN4-213ENST00000485749 FHDC1Q9C0D6 1143 aaPredicted RBP6.28□□□□□ -1.4
RTN4-213ENST00000485749 RUBCNLQ9H714 662 aa6.28□□□□□ -1.4
RTN4-213ENST00000485749 HRH3Q9Y5N1 445 aa6.28□□□□□ -1.4
RTN4-213ENST00000485749 A0A0U1RQG5 324 aaPredicted RBP6.27□□□□□ -1.41
RTN4-213ENST00000485749 ANKRD33BA6NCL7 494 aa6.27□□□□□ -1.41
RTN4-213ENST00000485749 SHISA8B8ZZ34 492 aa6.27□□□□□ -1.41
RTN4-213ENST00000485749 BAG6P46379 1132 aa6.27□□□□□ -1.41
RTN4-213ENST00000485749 SERPINB4P48594 390 aa6.27□□□□□ -1.41
RTN4-213ENST00000485749 SNRPNP63162 240 aaKnown RBP6.27□□□□□ -1.41
RTN4-213ENST00000485749 GRIN2CQ14957 1233 aa6.27□□□□□ -1.41
RTN4-213ENST00000485749 EML3Q32P44 896 aa6.27□□□□□ -1.41
RTN4-213ENST00000485749 NBPF1Q3BBV0 1214 aa6.27□□□□□ -1.41
RTN4-213ENST00000485749 NPAS4Q8IUM7 802 aa6.27□□□□□ -1.41
RTN4-213ENST00000485749 LARGE2Q8N3Y3 721 aa6.27□□□□□ -1.41
RTN4-213ENST00000485749 PLPP7Q8NBV4 271 aa6.27□□□□□ -1.41
RTN4-213ENST00000485749 ZNF526Q8TF50 670 aaPredicted RBP6.27□□□□□ -1.41
RTN4-213ENST00000485749 GIPC2Q8TF65 315 aa6.27□□□□□ -1.41
RTN4-213ENST00000485749 NIFKQ9BYG3 293 aaKnown RBP6.27□□□□□ -1.41
RTN4-213ENST00000485749 AVENQ9NQS1 362 aaPredicted RBP6.27□□□□□ -1.41
RTN4-213ENST00000485749 PCDHGC4Q9Y5F7 938 aa6.27□□□□□ -1.41
RTN4-213ENST00000485749 PTMSP20962 102 aa6.26□□□□□ -1.41
RTN4-213ENST00000485749 DEPDC4Q8N2C3 294 aa6.26□□□□□ -1.41
RTN4-213ENST00000485749 ABHD17AQ96GS6 310 aa6.26□□□□□ -1.41
RTN4-213ENST00000485749 CCDC85AQ96PX6 553 aaPredicted RBP6.26□□□□□ -1.41
RTN4-213ENST00000485749 BIN2Q9UBW5 565 aaPredicted RBP6.26□□□□□ -1.41
RTN4-213ENST00000485749 GGA1Q9UJY5 639 aa6.26□□□□□ -1.41
RTN4-213ENST00000485749 KRBA1A5PL33 1030 aa6.25□□□□□ -1.41
RTN4-213ENST00000485749 TATP17735 454 aaPredicted RBP6.25□□□□□ -1.41
RTN4-213ENST00000485749 NCLP19338 710 aaKnown RBP6.25□□□□□ -1.41
RTN4-213ENST00000485749 SETQ01105 290 aaPredicted RBP6.25□□□□□ -1.41
RTN4-213ENST00000485749 DPYDQ12882 1025 aa6.25□□□□□ -1.41
RTN4-213ENST00000485749 OGFOD1Q8N543 542 aa6.25□□□□□ -1.41
RTN4-213ENST00000485749 CCDC136Q96JN2 1154 aa6.25□□□□□ -1.41
RTN4-213ENST00000485749 DRC1Q96MC2 740 aa6.25□□□□□ -1.41
RTN4-213ENST00000485749 NOD1Q9Y239 953 aa6.25□□□□□ -1.41
RTN4-213ENST00000485749 GJA3Q9Y6H8 435 aa6.25□□□□□ -1.41
RTN4-213ENST00000485749 SPDYE3A6NKU9 549 aa6.24□□□□□ -1.41
RTN4-213ENST00000485749 ITGB2P05107 769 aa6.24□□□□□ -1.41
RTN4-213ENST00000485749 EPXP11678 715 aa6.24□□□□□ -1.41
RTN4-213ENST00000485749 ADH6P28332 368 aa6.24□□□□□ -1.41
RTN4-213ENST00000485749 PLA2G4AP47712 749 aa6.24□□□□□ -1.41
RTN4-213ENST00000485749 UBAP2LQ14157 1087 aaKnown RBP6.24□□□□□ -1.41
RTN4-213ENST00000485749 OXLD1Q5BKU9 147 aa6.24□□□□□ -1.41
RTN4-213ENST00000485749 FAM182BQ5T319 152 aa6.24□□□□□ -1.41
RTN4-213ENST00000485749 SIX5Q8N196 739 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms