RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 TMEM164Q5U3C3 297 aa8.31□□□□□ -1.08
SPTA1-207ENST00000485680 ESF1Q9H501 851 aaKnown RBP8.31□□□□□ -1.08
SPTA1-207ENST00000485680 NEURL1BA8MQ27 555 aa8.3□□□□□ -1.08
SPTA1-207ENST00000485680 GATA4P43694 442 aa8.3□□□□□ -1.08
SPTA1-207ENST00000485680 ELOAQ14241 798 aaKnown RBP8.3□□□□□ -1.08
SPTA1-207ENST00000485680 FOXD4L6Q3SYB3 417 aaPredicted RBP8.3□□□□□ -1.08
SPTA1-207ENST00000485680 LCE3BQ5TA77 95 aa8.3□□□□□ -1.08
SPTA1-207ENST00000485680 FOXD4L3Q6VB84 417 aaPredicted RBP8.3□□□□□ -1.08
SPTA1-207ENST00000485680 DNAAF2Q9NVR5 837 aaKnown RBP8.3□□□□□ -1.08
SPTA1-207ENST00000485680 ZBTB7BO15156 539 aaPredicted RBP8.29□□□□□ -1.08
SPTA1-207ENST00000485680 GNASQ5JWF2 1037 aa8.29□□□□□ -1.08
SPTA1-207ENST00000485680 TRIM50Q86XT4 487 aa8.29□□□□□ -1.08
SPTA1-207ENST00000485680 AEBP1Q8IUX7 1158 aa8.29□□□□□ -1.08
SPTA1-207ENST00000485680 ANKMY2Q8IV38 441 aa8.29□□□□□ -1.08
SPTA1-207ENST00000485680 PCDHGA11Q9Y5H2 935 aa8.29□□□□□ -1.08
SPTA1-207ENST00000485680 DPYDQ12882 1025 aa8.28□□□□□ -1.08
SPTA1-207ENST00000485680 USP4Q13107 963 aa8.28□□□□□ -1.08
SPTA1-207ENST00000485680 TMEM214Q6NUQ4 689 aaKnown RBP8.28□□□□□ -1.08
SPTA1-207ENST00000485680 CHSY3Q70JA7 882 aa8.28□□□□□ -1.08
SPTA1-207ENST00000485680 CRISPLD1Q9H336 500 aa8.28□□□□□ -1.08
SPTA1-207ENST00000485680 KLF15Q9UIH9 416 aa8.28□□□□□ -1.08
SPTA1-207ENST00000485680 DKK1O94907 266 aa8.27□□□□□ -1.09
SPTA1-207ENST00000485680 ATP1A2P50993 1020 aa8.27□□□□□ -1.09
SPTA1-207ENST00000485680 PSME1Q06323 249 aa8.27□□□□□ -1.09
SPTA1-207ENST00000485680 RSPO4Q2I0M5 234 aaPredicted RBP8.27□□□□□ -1.09
SPTA1-207ENST00000485680 PDE4CQ08493 712 aa8.26□□□□□ -1.09
SPTA1-207ENST00000485680 NKAPLQ5M9Q1 402 aa8.26□□□□□ -1.09
SPTA1-207ENST00000485680 CCDC102BQ68D86 513 aa8.26□□□□□ -1.09
SPTA1-207ENST00000485680 LARGE2Q8N3Y3 721 aa8.26□□□□□ -1.09
SPTA1-207ENST00000485680 TPCN2Q8NHX9 752 aa8.26□□□□□ -1.09
SPTA1-207ENST00000485680 FAM200AQ8TCP9 573 aa8.26□□□□□ -1.09
SPTA1-207ENST00000485680 TRIM11Q96F44 468 aa8.26□□□□□ -1.09
SPTA1-207ENST00000485680 SLAIN2Q9P270 581 aa8.26□□□□□ -1.09
SPTA1-207ENST00000485680 HCN2Q9UL51 889 aa8.26□□□□□ -1.09
SPTA1-207ENST00000485680 STAU1O95793 577 aaKnown RBP8.25□□□□□ -1.09
SPTA1-207ENST00000485680 MYCP01106 439 aaPredicted RBP8.25□□□□□ -1.09
SPTA1-207ENST00000485680 GTF2E1P29083 439 aaPredicted RBP8.25□□□□□ -1.09
SPTA1-207ENST00000485680 FAM69CQ0P6D2 419 aa8.25□□□□□ -1.09
SPTA1-207ENST00000485680 SIX5Q8N196 739 aa8.25□□□□□ -1.09
SPTA1-207ENST00000485680 SIRT1Q96EB6 747 aa8.25□□□□□ -1.09
SPTA1-207ENST00000485680 PLVAPQ9BX97 442 aa8.25□□□□□ -1.09
SPTA1-207ENST00000485680 ZCCHC2Q9C0B9 1178 aaKnown RBP8.25□□□□□ -1.09
SPTA1-207ENST00000485680 PCDHGC4Q9Y5F7 938 aa8.25□□□□□ -1.09
SPTA1-207ENST00000485680 SFI1A8K8P3 1242 aa8.24□□□□□ -1.09
SPTA1-207ENST00000485680 LGR5O75473 907 aa8.24□□□□□ -1.09
SPTA1-207ENST00000485680 PPARGC1BQ86YN6 1023 aaKnown RBP8.24□□□□□ -1.09
SPTA1-207ENST00000485680 FIGNL1Q6PIW4 674 aa8.23□□□□□ -1.09
SPTA1-207ENST00000485680 FCHSD1Q86WN1 690 aa8.23□□□□□ -1.09
SPTA1-207ENST00000485680 RHBDD1Q8TEB9 315 aa8.23□□□□□ -1.09
SPTA1-207ENST00000485680 PODXL2Q9NZ53 605 aa8.23□□□□□ -1.09
SPTA1-207ENST00000485680 SCO2A0A1W2PP80 73 aa8.22□□□□□ -1.09
SPTA1-207ENST00000485680 ZBTB7CA1YPR0 619 aa8.22□□□□□ -1.09
SPTA1-207ENST00000485680 SPATA31C1P0DKV0 1188 aa8.22□□□□□ -1.09
SPTA1-207ENST00000485680 ADH6P28332 368 aa8.22□□□□□ -1.09
SPTA1-207ENST00000485680 ARTNQ5T4W7 220 aa8.22□□□□□ -1.09
SPTA1-207ENST00000485680 BRD1O95696 1058 aa8.21□□□□□ -1.1
SPTA1-207ENST00000485680 SEC13P55735 322 aa8.21□□□□□ -1.1
SPTA1-207ENST00000485680 ESCO1Q5FWF5 840 aa8.21□□□□□ -1.1
SPTA1-207ENST00000485680 FAM182BQ5T319 152 aa8.21□□□□□ -1.1
SPTA1-207ENST00000485680 NLRP8Q86W28 1048 aa8.21□□□□□ -1.1
SPTA1-207ENST00000485680 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.21□□□□□ -1.1
SPTA1-207ENST00000485680 ZFP64Q9NPA5 681 aa8.21□□□□□ -1.1
SPTA1-207ENST00000485680 AVENQ9NQS1 362 aaPredicted RBP8.21□□□□□ -1.1
SPTA1-207ENST00000485680 TPSG1Q9NRR2 321 aa8.21□□□□□ -1.1
SPTA1-207ENST00000485680 TMEM229AB2RXF0 380 aa8.2□□□□□ -1.1
SPTA1-207ENST00000485680 ATXN7O15265 892 aaPredicted RBP8.2□□□□□ -1.1
SPTA1-207ENST00000485680 SCNN1DP51172 638 aa8.2□□□□□ -1.1
SPTA1-207ENST00000485680 TNP2Q05952 138 aa8.2□□□□□ -1.1
SPTA1-207ENST00000485680 CLP1Q92989 425 aaKnown RBP8.2□□□□□ -1.1
SPTA1-207ENST00000485680 RBM19Q9Y4C8 960 aaKnown RBP8.2□□□□□ -1.1
SPTA1-207ENST00000485680 MAPTP10636 758 aaKnown RBP8.19□□□□□ -1.1
SPTA1-207ENST00000485680 PHLDB3Q6NSJ2 640 aa8.19□□□□□ -1.1
SPTA1-207ENST00000485680 TSEN2Q8NCE0 465 aaKnown RBP8.19□□□□□ -1.1
SPTA1-207ENST00000485680 KRTAP9-9Q9BYP9 154 aa8.19□□□□□ -1.1
SPTA1-207ENST00000485680 KRTAP9-4Q9BYQ2 154 aa8.19□□□□□ -1.1
SPTA1-207ENST00000485680 ETNK1Q9HBU6 452 aa8.19□□□□□ -1.1
SPTA1-207ENST00000485680 ZNF358Q9NW07 568 aa8.19□□□□□ -1.1
SPTA1-207ENST00000485680 DYRK3O43781 588 aa8.18□□□□□ -1.1
SPTA1-207ENST00000485680 PRMT3O60678 531 aa8.18□□□□□ -1.1
SPTA1-207ENST00000485680 ATP4AP20648 1035 aa8.18□□□□□ -1.1
SPTA1-207ENST00000485680 SCNN1AP37088 669 aa8.18□□□□□ -1.1
SPTA1-207ENST00000485680 GDF10P55107 478 aa8.18□□□□□ -1.1
SPTA1-207ENST00000485680 SWI5Q1ZZU3 235 aa8.18□□□□□ -1.1
SPTA1-207ENST00000485680 PRIMPOLQ96LW4 560 aa8.18□□□□□ -1.1
SPTA1-207ENST00000485680 CD33P20138 364 aa8.17□□□□□ -1.1
SPTA1-207ENST00000485680 ATP2B4P23634 1241 aa8.17□□□□□ -1.1
SPTA1-207ENST00000485680 SSFA2P28290 1259 aa8.17□□□□□ -1.1
SPTA1-207ENST00000485680 PLA2G4AP47712 749 aa8.17□□□□□ -1.1
SPTA1-207ENST00000485680 GAS2L2Q8NHY3 880 aa8.17□□□□□ -1.1
SPTA1-207ENST00000485680 C1orf216Q8TAB5 229 aa8.17□□□□□ -1.1
SPTA1-207ENST00000485680 HINFPQ9BQA5 517 aa8.17□□□□□ -1.1
SPTA1-207ENST00000485680 SERTAD1Q9UHV2 236 aa8.17□□□□□ -1.1
SPTA1-207ENST00000485680 PCBP4P57723 403 aaKnown RBP8.16□□□□□ -1.1
SPTA1-207ENST00000485680 KCNA1Q09470 495 aa8.16□□□□□ -1.1
SPTA1-207ENST00000485680 TLR1Q15399 786 aa8.16□□□□□ -1.1
SPTA1-207ENST00000485680 DCDC2BA2VCK2 349 aa8.15□□□□□ -1.1
SPTA1-207ENST00000485680 OCLNQ16625 522 aa8.15□□□□□ -1.1
SPTA1-207ENST00000485680 IVNS1ABPQ9Y6Y0 642 aa8.15□□□□□ -1.1
SPTA1-207ENST00000485680 A0A1W2PNR3 127 aa8.14□□□□□ -1.11
SPTA1-207ENST00000485680 INHAP05111 366 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms