RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 SLIT3O75094 1523 aa10.62□□□□□ -0.71
CLRN1-206ENST00000485607 COL5A2P05997 1499 aaPredicted RBP10.61□□□□□ -0.71
CLRN1-206ENST00000485607 EVA1CP58658 441 aa10.61□□□□□ -0.71
CLRN1-206ENST00000485607 NLRP13Q86W25 1043 aa10.61□□□□□ -0.71
CLRN1-206ENST00000485607 RGPD1P0DJD0 1748 aa10.61□□□□□ -0.71
CLRN1-206ENST00000485607 EVC2Q86UK5 1308 aa10.6□□□□□ -0.71
CLRN1-206ENST00000485607 DISP2A7MBM2 1401 aa10.6□□□□□ -0.71
CLRN1-206ENST00000485607 ZBTB7CA1YPR0 619 aa10.6□□□□□ -0.71
CLRN1-206ENST00000485607 Q3C1V9 767 aa10.6□□□□□ -0.71
CLRN1-206ENST00000485607 MSS51Q4VC12 460 aa10.6□□□□□ -0.71
CLRN1-206ENST00000485607 BARGINQ6ZT62 677 aa10.6□□□□□ -0.71
CLRN1-206ENST00000485607 SNIP1Q8TAD8 396 aaKnown RBP10.6□□□□□ -0.71
CLRN1-206ENST00000485607 PHOX2BQ99453 314 aa10.6□□□□□ -0.71
CLRN1-206ENST00000485607 BRD4O60885 1362 aaPredicted RBP10.6□□□□□ -0.71
CLRN1-206ENST00000485607 TRIM37O94972 964 aa10.59□□□□□ -0.71
CLRN1-206ENST00000485607 SMCPP49901 116 aaPredicted RBP10.59□□□□□ -0.71
CLRN1-206ENST00000485607 LCE2AQ5TA79 106 aaPredicted RBP10.59□□□□□ -0.71
CLRN1-206ENST00000485607 TCP11L2Q8N4U5 519 aa10.59□□□□□ -0.71
CLRN1-206ENST00000485607 AATKQ6ZMQ8 1374 aa10.58□□□□□ -0.72
CLRN1-206ENST00000485607 WNT7AO00755 349 aa10.58□□□□□ -0.72
CLRN1-206ENST00000485607 TRIM32Q13049 653 aa10.58□□□□□ -0.72
CLRN1-206ENST00000485607 EZH2Q15910 746 aaKnown RBP10.58□□□□□ -0.72
CLRN1-206ENST00000485607 CCDC24Q8N4L8 307 aa10.58□□□□□ -0.72
CLRN1-206ENST00000485607 CRB1P82279 1406 aa10.58□□□□□ -0.72
CLRN1-206ENST00000485607 CPSF1Q10570 1443 aaKnown RBP10.58□□□□□ -0.72
CLRN1-206ENST00000485607 TTC21BQ7Z4L5 1316 aa10.58□□□□□ -0.72
CLRN1-206ENST00000485607 GPR37O15354 613 aa10.57□□□□□ -0.72
CLRN1-206ENST00000485607 R3HDM1Q15032 1099 aaKnown RBP10.57□□□□□ -0.72
CLRN1-206ENST00000485607 FAM196AQ6ZSG2 479 aa10.57□□□□□ -0.72
CLRN1-206ENST00000485607 GPIHBP1Q8IV16 184 aa10.57□□□□□ -0.72
CLRN1-206ENST00000485607 CAMKK2Q96RR4 588 aa10.57□□□□□ -0.72
CLRN1-206ENST00000485607 LRP5O75197 1615 aa10.57□□□□□ -0.72
CLRN1-206ENST00000485607 COL18A1P39060 1754 aa10.57□□□□□ -0.72
CLRN1-206ENST00000485607 SMPD1P17405 629 aa10.56□□□□□ -0.72
CLRN1-206ENST00000485607 PDE3BQ13370 1112 aa10.56□□□□□ -0.72
CLRN1-206ENST00000485607 MRGPRX2Q96LB1 330 aa10.56□□□□□ -0.72
CLRN1-206ENST00000485607 NFAT5O94916 1531 aa10.56□□□□□ -0.72
CLRN1-206ENST00000485607 AKAP12Q02952 1782 aa10.56□□□□□ -0.72
CLRN1-206ENST00000485607 PARP4Q9UKK3 1724 aaKnown RBP10.55□□□□□ -0.72
CLRN1-206ENST00000485607 CD163L1Q9NR16 1453 aa10.55□□□□□ -0.72
CLRN1-206ENST00000485607 LRRC37A3O60309 1634 aa10.55□□□□□ -0.72
CLRN1-206ENST00000485607 SBNO2Q9Y2G9 1366 aa10.55□□□□□ -0.72
CLRN1-206ENST00000485607 APBA3O96018 575 aa10.55□□□□□ -0.72
CLRN1-206ENST00000485607 ATP13A2Q9NQ11 1180 aa10.55□□□□□ -0.72
CLRN1-206ENST00000485607 THRAP3Q9Y2W1 955 aaKnown RBP10.55□□□□□ -0.72
CLRN1-206ENST00000485607 KTN1Q86UP2 1357 aaKnown RBP10.54□□□□□ -0.72
CLRN1-206ENST00000485607 J3QL48 77 aa10.54□□□□□ -0.72
CLRN1-206ENST00000485607 ARHGEF25Q86VW2 580 aa10.54□□□□□ -0.72
CLRN1-206ENST00000485607 USB1Q9BQ65 265 aaKnown RBP10.54□□□□□ -0.72
CLRN1-206ENST00000485607 CARD11Q9BXL7 1154 aa10.54□□□□□ -0.72
CLRN1-206ENST00000485607 PEAK1Q9H792 1746 aa10.54□□□□□ -0.72
CLRN1-206ENST00000485607 WDR17Q8IZU2 1322 aa10.54□□□□□ -0.72
CLRN1-206ENST00000485607 MON2Q7Z3U7 1717 aa10.53□□□□□ -0.72
CLRN1-206ENST00000485607 TOM1L2Q6ZVM7 507 aa10.53□□□□□ -0.72
CLRN1-206ENST00000485607 PTF1AQ7RTS3 328 aa10.53□□□□□ -0.72
CLRN1-206ENST00000485607 SENP2Q9HC62 589 aa10.53□□□□□ -0.72
CLRN1-206ENST00000485607 RREB1Q92766 1687 aa10.53□□□□□ -0.72
CLRN1-206ENST00000485607 TTC21AQ8NDW8 1320 aa10.53□□□□□ -0.72
CLRN1-206ENST00000485607 PARD3Q8TEW0 1356 aa10.52□□□□□ -0.72
CLRN1-206ENST00000485607 TONSLQ96HA7 1378 aa10.52□□□□□ -0.72
CLRN1-206ENST00000485607 OVOS2A0A0G2JMS6 1433 aa10.52□□□□□ -0.73
CLRN1-206ENST00000485607 OVOS2A0A0J9YW53 1432 aa10.52□□□□□ -0.73
CLRN1-206ENST00000485607 OVOS2Q6IE36 1432 aa10.52□□□□□ -0.73
CLRN1-206ENST00000485607 SNRPBP14678 240 aaKnown RBP10.52□□□□□ -0.73
CLRN1-206ENST00000485607 MMP16P51512 607 aa10.52□□□□□ -0.73
CLRN1-206ENST00000485607 NFX1Q12986 1120 aaKnown RBP10.52□□□□□ -0.73
CLRN1-206ENST00000485607 NME9Q86XW9 330 aa10.52□□□□□ -0.73
CLRN1-206ENST00000485607 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.52□□□□□ -0.73
CLRN1-206ENST00000485607 NUP188Q5SRE5 1749 aa10.52□□□□□ -0.73
CLRN1-206ENST00000485607 KDM4AO75164 1064 aa10.51□□□□□ -0.73
CLRN1-206ENST00000485607 INSM1Q01101 510 aaPredicted RBP10.51□□□□□ -0.73
CLRN1-206ENST00000485607 KCNH5Q8NCM2 988 aa10.51□□□□□ -0.73
CLRN1-206ENST00000485607 REPIN1Q9BWE0 567 aaKnown RBP10.51□□□□□ -0.73
CLRN1-206ENST00000485607 SLC12A5Q9H2X9 1139 aa10.51□□□□□ -0.73
CLRN1-206ENST00000485607 WNK3Q9BYP7 1800 aa10.51□□□□□ -0.73
CLRN1-206ENST00000485607 USP31Q70CQ4 1352 aa10.51□□□□□ -0.73
CLRN1-206ENST00000485607 DDB1Q16531 1140 aa10.5□□□□□ -0.73
CLRN1-206ENST00000485607 MARCH10Q8NA82 808 aaPredicted RBP10.5□□□□□ -0.73
CLRN1-206ENST00000485607 TMC1Q8TDI8 760 aa10.5□□□□□ -0.73
CLRN1-206ENST00000485607 HPS1Q92902 700 aa10.5□□□□□ -0.73
CLRN1-206ENST00000485607 A0A1W2PP64 1363 aa10.5□□□□□ -0.73
CLRN1-206ENST00000485607 RGPD5Q99666 1765 aa10.49□□□□□ -0.73
CLRN1-206ENST00000485607 CSB-PGBD3P0DP91 1061 aa10.49□□□□□ -0.73
CLRN1-206ENST00000485607 CD46P15529 392 aa10.49□□□□□ -0.73
CLRN1-206ENST00000485607 RC3H1Q5TC82 1133 aaKnown RBP10.49□□□□□ -0.73
CLRN1-206ENST00000485607 TESK2Q96S53 571 aa10.49□□□□□ -0.73
CLRN1-206ENST00000485607 STK17AQ9UEE5 414 aa10.49□□□□□ -0.73
CLRN1-206ENST00000485607 USP54Q70EL1 1684 aa10.49□□□□□ -0.73
CLRN1-206ENST00000485607 ABCC6O95255 1503 aa10.48□□□□□ -0.73
CLRN1-206ENST00000485607 TERTO14746 1132 aaKnown RBP10.48□□□□□ -0.73
CLRN1-206ENST00000485607 CARD10Q9BWT7 1032 aa10.48□□□□□ -0.73
CLRN1-206ENST00000485607 EDC4Q6P2E9 1401 aaKnown RBP10.48□□□□□ -0.73
CLRN1-206ENST00000485607 DXOO77932 396 aaKnown RBP10.47□□□□□ -0.73
CLRN1-206ENST00000485607 TRIM47Q96LD4 638 aa10.47□□□□□ -0.73
CLRN1-206ENST00000485607 ST20-MTHFSA0A0A6YYL1 179 aa10.46□□□□□ -0.73
CLRN1-206ENST00000485607 ALDH1A1P00352 501 aa10.46□□□□□ -0.73
CLRN1-206ENST00000485607 MDM2Q00987 491 aaPredicted RBP10.46□□□□□ -0.73
CLRN1-206ENST00000485607 HDGFL2Q7Z4V5 671 aaPredicted RBP10.46□□□□□ -0.73
CLRN1-206ENST00000485607 HLA-CQ95604 372 aa10.46□□□□□ -0.73
CLRN1-206ENST00000485607 KIFC2Q96AC6 838 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms