RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 MMP10P09238 476 aa10.16□□□□□ -0.78
MACF1-220ENST00000485063 EIF5P55010 431 aaKnown RBP10.16□□□□□ -0.78
MACF1-220ENST00000485063 CCDC27Q2M243 656 aa10.16□□□□□ -0.78
MACF1-220ENST00000485063 NGEFQ8N5V2 710 aa10.16□□□□□ -0.78
MACF1-220ENST00000485063 SYT17Q9BSW7 474 aa10.16□□□□□ -0.78
MACF1-220ENST00000485063 IFT57Q9NWB7 429 aa10.16□□□□□ -0.78
MACF1-220ENST00000485063 SRP68Q9UHB9 627 aaKnown RBP10.16□□□□□ -0.78
MACF1-220ENST00000485063 EIF2S2P20042 333 aaKnown RBP10.15□□□□□ -0.78
MACF1-220ENST00000485063 MNX1P50219 401 aaPredicted RBP10.15□□□□□ -0.78
MACF1-220ENST00000485063 DZIP3Q86Y13 1208 aaKnown RBP10.15□□□□□ -0.78
MACF1-220ENST00000485063 CHMP4AQ9BY43 222 aa10.15□□□□□ -0.78
MACF1-220ENST00000485063 PCDH10Q9P2E7 1040 aa10.15□□□□□ -0.78
MACF1-220ENST00000485063 ZNF652Q9Y2D9 606 aa10.15□□□□□ -0.78
MACF1-220ENST00000485063 ERBB4Q15303 1308 aa10.14□□□□□ -0.79
MACF1-220ENST00000485063 PIP4K2AP48426 406 aaPredicted RBP10.14□□□□□ -0.79
MACF1-220ENST00000485063 FKBP8Q14318 412 aa10.14□□□□□ -0.79
MACF1-220ENST00000485063 POTEGQ6S5H5 508 aa10.14□□□□□ -0.79
MACF1-220ENST00000485063 WWC1Q8IX03 1113 aa10.14□□□□□ -0.79
MACF1-220ENST00000485063 TBC1D2BQ9UPU7 963 aa10.14□□□□□ -0.79
MACF1-220ENST00000485063 SALL2Q9Y467 1007 aaPredicted RBP10.14□□□□□ -0.79
MACF1-220ENST00000485063 CD2APQ9Y5K6 639 aa10.14□□□□□ -0.79
MACF1-220ENST00000485063 SCN7AQ01118 1682 aa10.14□□□□□ -0.79
MACF1-220ENST00000485063 BCORQ6W2J9 1755 aa10.14□□□□□ -0.79
MACF1-220ENST00000485063 SENP3-EIF4A1A0A087X0R7 540 aa10.13□□□□□ -0.79
MACF1-220ENST00000485063 GALR2O43603 387 aaPredicted RBP10.13□□□□□ -0.79
MACF1-220ENST00000485063 HOXB7P09629 217 aa10.13□□□□□ -0.79
MACF1-220ENST00000485063 MYL6BP14649 208 aa10.13□□□□□ -0.79
MACF1-220ENST00000485063 KIF6Q6ZMV9 814 aa10.13□□□□□ -0.79
MACF1-220ENST00000485063 OTUD5Q96G74 571 aa10.13□□□□□ -0.79
MACF1-220ENST00000485063 MBIPQ9NS73 344 aa10.13□□□□□ -0.79
MACF1-220ENST00000485063 IL16Q14005 1332 aa10.12□□□□□ -0.79
MACF1-220ENST00000485063 NPHP1O15259 732 aa10.12□□□□□ -0.79
MACF1-220ENST00000485063 ZNF853P0CG23 659 aa10.12□□□□□ -0.79
MACF1-220ENST00000485063 HDGFL1Q5TGJ6 251 aa10.12□□□□□ -0.79
MACF1-220ENST00000485063 CLEC4GQ6UXB4 293 aa10.12□□□□□ -0.79
MACF1-220ENST00000485063 BICDL1Q6ZP65 573 aa10.12□□□□□ -0.79
MACF1-220ENST00000485063 WDR63Q8IWG1 891 aa10.12□□□□□ -0.79
MACF1-220ENST00000485063 NBPF26B4DH59 902 aa10.11□□□□□ -0.79
MACF1-220ENST00000485063 RGL2O15211 777 aa10.11□□□□□ -0.79
MACF1-220ENST00000485063 TM4SF1P30408 202 aa10.11□□□□□ -0.79
MACF1-220ENST00000485063 DUSP27Q5VZP5 1158 aa10.11□□□□□ -0.79
MACF1-220ENST00000485063 NBPF10Q6P3W6 841 aaKnown RBP10.11□□□□□ -0.79
MACF1-220ENST00000485063 PELP1Q8IZL8 1130 aaKnown RBP10.11□□□□□ -0.79
MACF1-220ENST00000485063 NBPF15Q8N660 670 aa10.11□□□□□ -0.79
MACF1-220ENST00000485063 NECTIN2Q92692 538 aa10.11□□□□□ -0.79
MACF1-220ENST00000485063 SETDB2Q96T68 719 aa10.11□□□□□ -0.79
MACF1-220ENST00000485063 AFDNP55196 1824 aaKnown RBP10.11□□□□□ -0.79
MACF1-220ENST00000485063 KIF13BQ9NQT8 1826 aa10.11□□□□□ -0.79
MACF1-220ENST00000485063 NUP98P52948 1817 aa10.1□□□□□ -0.79
MACF1-220ENST00000485063 POLRMTO00411 1230 aaKnown RBP10.1□□□□□ -0.79
MACF1-220ENST00000485063 CAMTA2O94983 1202 aa10.1□□□□□ -0.79
MACF1-220ENST00000485063 SERPINB2P05120 415 aa10.1□□□□□ -0.79
MACF1-220ENST00000485063 TGFB2P61812 414 aa10.1□□□□□ -0.79
MACF1-220ENST00000485063 NFIXQ14938 502 aa10.1□□□□□ -0.79
MACF1-220ENST00000485063 GPR162Q16538 588 aa10.1□□□□□ -0.79
MACF1-220ENST00000485063 KRT24Q2M2I5 525 aa10.1□□□□□ -0.79
MACF1-220ENST00000485063 TBC1D9BQ66K14 1250 aa10.1□□□□□ -0.79
MACF1-220ENST00000485063 BCL2L12Q9HB09 334 aa10.1□□□□□ -0.79
MACF1-220ENST00000485063 DDX21Q9NR30 783 aaKnown RBP eCLIP10.1□□□□□ -0.79
MACF1-220ENST00000485063 DBF4Q9UBU7 674 aaPredicted RBP10.1□□□□□ -0.79
MACF1-220ENST00000485063 CARMIL3Q8ND23 1372 aa10.1□□□□□ -0.79
MACF1-220ENST00000485063 ERVV-1B6SEH8 477 aa10.09□□□□□ -0.79
MACF1-220ENST00000485063 ELL2O00472 640 aaPredicted RBP10.09□□□□□ -0.79
MACF1-220ENST00000485063 DDR1Q08345 913 aa10.09□□□□□ -0.79
MACF1-220ENST00000485063 MIER1Q8N108 512 aa10.09□□□□□ -0.79
MACF1-220ENST00000485063 NLGN2Q8NFZ4 835 aa10.09□□□□□ -0.79
MACF1-220ENST00000485063 TSR2Q969E8 191 aaKnown RBP10.09□□□□□ -0.79
MACF1-220ENST00000485063 MYH16Q9H6N6 1097 aa10.09□□□□□ -0.79
MACF1-220ENST00000485063 N4BP2Q86UW6 1770 aaPredicted RBP10.09□□□□□ -0.79
MACF1-220ENST00000485063 MAP3K15Q6ZN16 1313 aa10.08□□□□□ -0.8
MACF1-220ENST00000485063 C10orf71Q711Q0 1435 aa10.08□□□□□ -0.8
MACF1-220ENST00000485063 NRXN2Q9P2S2 1712 aa10.08□□□□□ -0.8
MACF1-220ENST00000485063 ST5P78524 1137 aa10.08□□□□□ -0.8
MACF1-220ENST00000485063 GOLGA2Q08379 1002 aa10.08□□□□□ -0.8
MACF1-220ENST00000485063 AIMP1Q12904 312 aaKnown RBP10.08□□□□□ -0.8
MACF1-220ENST00000485063 CCDC30Q5VVM6 783 aa10.08□□□□□ -0.8
MACF1-220ENST00000485063 PHF12Q96QT6 1004 aa10.08□□□□□ -0.8
MACF1-220ENST00000485063 HYPKQ9NX55 129 aa10.08□□□□□ -0.8
MACF1-220ENST00000485063 CHPF2Q9P2E5 772 aa10.08□□□□□ -0.8
MACF1-220ENST00000485063 NIP7Q9Y221 180 aaKnown RBP eCLIP10.08□□□□□ -0.8
MACF1-220ENST00000485063 GRIN3BO60391 1043 aa10.07□□□□□ -0.8
MACF1-220ENST00000485063 GTF2E1P29083 439 aaPredicted RBP10.07□□□□□ -0.8
MACF1-220ENST00000485063 PDIA6Q15084 440 aa10.07□□□□□ -0.8
MACF1-220ENST00000485063 TWISTNBQ3B726 338 aaPredicted RBP10.07□□□□□ -0.8
MACF1-220ENST00000485063 HSP90AB3PQ58FF7 597 aa10.07□□□□□ -0.8
MACF1-220ENST00000485063 TPTE2Q6XPS3 522 aa10.07□□□□□ -0.8
MACF1-220ENST00000485063 TTLL7Q6ZT98 887 aa10.07□□□□□ -0.8
MACF1-220ENST00000485063 COPS6Q7L5N1 327 aa10.07□□□□□ -0.8
MACF1-220ENST00000485063 NBPF5PQ86XG9 351 aaPredicted RBP10.07□□□□□ -0.8
MACF1-220ENST00000485063 CNBD1Q8NA66 436 aa10.07□□□□□ -0.8
MACF1-220ENST00000485063 STK31Q9BXU1 1019 aa10.07□□□□□ -0.8
MACF1-220ENST00000485063 ZBTB3Q9H5J0 574 aa10.07□□□□□ -0.8
MACF1-220ENST00000485063 PDZRN3Q9UPQ7 1066 aa10.07□□□□□ -0.8
MACF1-220ENST00000485063 ANXA1P04083 346 aa10.06□□□□□ -0.8
MACF1-220ENST00000485063 PDE6BP35913 854 aa10.06□□□□□ -0.8
MACF1-220ENST00000485063 HLFQ16534 295 aa10.06□□□□□ -0.8
MACF1-220ENST00000485063 GIGYF2Q6Y7W6 1299 aaKnown RBP10.06□□□□□ -0.8
MACF1-220ENST00000485063 C8orf58Q8NAV2 365 aa10.06□□□□□ -0.8
MACF1-220ENST00000485063 XAGE3Q8WTP9 111 aa10.06□□□□□ -0.8
MACF1-220ENST00000485063 NYXQ9GZU5 481 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms