RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 N4BP2Q86UW6 1770 aaPredicted RBP21.08■□□□□ 0.96
DDR1-246ENST00000485023 AFDNP55196 1824 aaKnown RBP21.07■□□□□ 0.96
DDR1-246ENST00000485023 DPEP1P16444 411 aa21.07■□□□□ 0.96
DDR1-246ENST00000485023 PDIA6Q15084 440 aa21.07■□□□□ 0.96
DDR1-246ENST00000485023 HLFQ16534 295 aa21.07■□□□□ 0.96
DDR1-246ENST00000485023 SETDB2Q96T68 719 aa21.07■□□□□ 0.96
DDR1-246ENST00000485023 CHPF2Q9P2E5 772 aa21.07■□□□□ 0.96
DDR1-246ENST00000485023 NRXN2Q9P2S2 1712 aa21.06■□□□□ 0.96
DDR1-246ENST00000485023 FAM177BA6PVY3 158 aa21.05■□□□□ 0.96
DDR1-246ENST00000485023 NPHP1O15259 732 aa21.05■□□□□ 0.96
DDR1-246ENST00000485023 CHRNA5P30532 468 aa21.05■□□□□ 0.96
DDR1-246ENST00000485023 C8orf58Q8NAV2 365 aa21.05■□□□□ 0.96
DDR1-246ENST00000485023 MAP3K15Q6ZN16 1313 aa21.04■□□□□ 0.96
DDR1-246ENST00000485023 CCER2I3L3R5 266 aa21.04■□□□□ 0.96
DDR1-246ENST00000485023 TGFB2P61812 414 aa21.04■□□□□ 0.96
DDR1-246ENST00000485023 AIMP1Q12904 312 aaKnown RBP21.04■□□□□ 0.96
DDR1-246ENST00000485023 LRP10Q7Z4F1 713 aa21.04■□□□□ 0.96
DDR1-246ENST00000485023 NIP7Q9Y221 180 aaKnown RBP eCLIP21.04■□□□□ 0.96
DDR1-246ENST00000485023 HOXB7P09629 217 aa21.03■□□□□ 0.96
DDR1-246ENST00000485023 PRR5LQ6MZQ0 368 aa21.03■□□□□ 0.96
DDR1-246ENST00000485023 CLEC4GQ6UXB4 293 aa21.03■□□□□ 0.96
DDR1-246ENST00000485023 CNBD1Q8NA66 436 aa21.02■□□□□ 0.96
DDR1-246ENST00000485023 XAGE3Q8WTP9 111 aa21.02■□□□□ 0.96
DDR1-246ENST00000485023 DDX21Q9NR30 783 aaKnown RBP eCLIP21.02■□□□□ 0.96
DDR1-246ENST00000485023 GPTP24298 496 aa21.01■□□□□ 0.95
DDR1-246ENST00000485023 NCBP3Q53F19 620 aaKnown RBP21.01■□□□□ 0.95
DDR1-246ENST00000485023 COPS6Q7L5N1 327 aa21.01■□□□□ 0.95
DDR1-246ENST00000485023 NBPF5PQ86XG9 351 aaPredicted RBP21.01■□□□□ 0.95
DDR1-246ENST00000485023 MIER1Q8N108 512 aa21.01■□□□□ 0.95
DDR1-246ENST00000485023 TSPYL6Q8N831 410 aa21.01■□□□□ 0.95
DDR1-246ENST00000485023 BCS1LQ9Y276 419 aa21.01■□□□□ 0.95
DDR1-246ENST00000485023 IL16Q14005 1332 aa21.01■□□□□ 0.95
DDR1-246ENST00000485023 FANCIQ9NVI1 1328 aa21.01■□□□□ 0.95
DDR1-246ENST00000485023 ERVV-1B6SEH8 477 aa21■□□□□ 0.95
DDR1-246ENST00000485023 GOLGB1Q14789 3259 aaKnown RBP21■□□□□ 0.95
DDR1-246ENST00000485023 WDR63Q8IWG1 891 aa20.99■□□□□ 0.95
DDR1-246ENST00000485023 DBF4Q9UBU7 674 aaPredicted RBP20.99■□□□□ 0.95
DDR1-246ENST00000485023 ATP10DQ9P241 1426 aa20.98■□□□□ 0.95
DDR1-246ENST00000485023 UTRNP46939 3433 aa20.98■□□□□ 0.95
DDR1-246ENST00000485023 TCERG1O14776 1098 aaKnown RBP20.98■□□□□ 0.95
DDR1-246ENST00000485023 KCNA3P22001 575 aa20.98■□□□□ 0.95
DDR1-246ENST00000485023 ST5P78524 1137 aa20.98■□□□□ 0.95
DDR1-246ENST00000485023 C2CD5Q86YS7 1000 aa20.98■□□□□ 0.95
DDR1-246ENST00000485023 SPINK5Q9NQ38 1064 aaPredicted RBP20.98■□□□□ 0.95
DDR1-246ENST00000485023 RGL2O15211 777 aa20.97■□□□□ 0.95
DDR1-246ENST00000485023 GRIN3BO60391 1043 aa20.97■□□□□ 0.95
DDR1-246ENST00000485023 UBN2Q6ZU65 1347 aa20.97■□□□□ 0.95
DDR1-246ENST00000485023 NUP98P52948 1817 aa20.97■□□□□ 0.95
DDR1-246ENST00000485023 ANKRD31Q8N7Z5 1873 aa20.96■□□□□ 0.95
DDR1-246ENST00000485023 TWISTNBQ3B726 338 aaPredicted RBP20.96■□□□□ 0.95
DDR1-246ENST00000485023 IFFO2Q5TF58 517 aa20.96■□□□□ 0.95
DDR1-246ENST00000485023 GIGYF2Q6Y7W6 1299 aaKnown RBP20.96■□□□□ 0.95
DDR1-246ENST00000485023 PIM2Q9P1W9 311 aa20.96■□□□□ 0.95
DDR1-246ENST00000485023 COL11A2P13942 1736 aaPredicted RBP20.95■□□□□ 0.94
DDR1-246ENST00000485023 GTF2E1P29083 439 aaPredicted RBP20.95■□□□□ 0.94
DDR1-246ENST00000485023 ZNF428Q96B54 188 aa20.95■□□□□ 0.94
DDR1-246ENST00000485023 BRIP1Q9BX63 1249 aa20.95■□□□□ 0.94
DDR1-246ENST00000485023 HYPKQ9NX55 129 aa20.95■□□□□ 0.94
DDR1-246ENST00000485023 BRCA1P38398 1863 aaKnown RBP20.94■□□□□ 0.94
DDR1-246ENST00000485023 H0YIN7 160 aa20.94■□□□□ 0.94
DDR1-246ENST00000485023 EXOSC9Q06265 439 aaKnown RBP20.94■□□□□ 0.94
DDR1-246ENST00000485023 DALRD3Q5D0E6 543 aaKnown RBP20.94■□□□□ 0.94
DDR1-246ENST00000485023 TPTE2Q6XPS3 522 aa20.94■□□□□ 0.94
DDR1-246ENST00000485023 NUTM1Q86Y26 1132 aa20.94■□□□□ 0.94
DDR1-246ENST00000485023 PHAXQ9H814 394 aaKnown RBP20.94■□□□□ 0.94
DDR1-246ENST00000485023 PDE6BP35913 854 aa20.93■□□□□ 0.94
DDR1-246ENST00000485023 GOLGA2Q08379 1002 aa20.93■□□□□ 0.94
DDR1-246ENST00000485023 CCDC30Q5VVM6 783 aa20.93■□□□□ 0.94
DDR1-246ENST00000485023 SUSD4Q5VX71 490 aa20.93■□□□□ 0.94
DDR1-246ENST00000485023 ZNF34Q8IZ26 560 aa20.93■□□□□ 0.94
DDR1-246ENST00000485023 ABCC12Q96J65 1359 aa20.93■□□□□ 0.94
DDR1-246ENST00000485023 ZNF622Q969S3 477 aaKnown RBP eCLIP20.92■□□□□ 0.94
DDR1-246ENST00000485023 MYH16Q9H6N6 1097 aa20.92■□□□□ 0.94
DDR1-246ENST00000485023 ZNF521Q96K83 1311 aa20.92■□□□□ 0.94
DDR1-246ENST00000485023 DLEC1Q9Y238 1755 aa20.92■□□□□ 0.94
DDR1-246ENST00000485023 ERFEQ4G0M1 354 aa20.91■□□□□ 0.94
DDR1-246ENST00000485023 ANKRD13DQ6ZTN6 518 aa20.91■□□□□ 0.94
DDR1-246ENST00000485023 NYXQ9GZU5 481 aa20.91■□□□□ 0.94
DDR1-246ENST00000485023 TNRC6CQ9HCJ0 1690 aaKnown RBP20.91■□□□□ 0.94
DDR1-246ENST00000485023 ANKRD36CQ5JPF3 1778 aa20.9■□□□□ 0.94
DDR1-246ENST00000485023 HSP90AB3PQ58FF7 597 aa20.9■□□□□ 0.94
DDR1-246ENST00000485023 ARHGAP27Q6ZUM4 889 aa20.9■□□□□ 0.94
DDR1-246ENST00000485023 PLBD2Q8NHP8 589 aa20.9■□□□□ 0.94
DDR1-246ENST00000485023 STK31Q9BXU1 1019 aa20.9■□□□□ 0.94
DDR1-246ENST00000485023 NTSR2O95665 410 aa20.89■□□□□ 0.93
DDR1-246ENST00000485023 ZNF219Q9P2Y4 722 aaPredicted RBP20.89■□□□□ 0.93
DDR1-246ENST00000485023 ARFGEF2Q9Y6D5 1785 aa20.88■□□□□ 0.93
DDR1-246ENST00000485023 ATP5J2-PTCD1G3V325 749 aa20.88■□□□□ 0.93
DDR1-246ENST00000485023 TCIRG1Q13488 830 aa20.88■□□□□ 0.93
DDR1-246ENST00000485023 PARP10Q53GL7 1025 aa20.88■□□□□ 0.93
DDR1-246ENST00000485023 RIC3Q7Z5B4 369 aa20.88■□□□□ 0.93
DDR1-246ENST00000485023 TTLL6Q8N841 843 aa20.88■□□□□ 0.93
DDR1-246ENST00000485023 IBTKQ9P2D0 1353 aaPredicted RBP20.87■□□□□ 0.93
DDR1-246ENST00000485023 PPP1R42Q7Z4L9 355 aa20.87■□□□□ 0.93
DDR1-246ENST00000485023 NLRP10Q86W26 655 aa20.87■□□□□ 0.93
DDR1-246ENST00000485023 UTP14AQ9BVJ6 771 aaKnown RBP20.87■□□□□ 0.93
DDR1-246ENST00000485023 CHMP4AQ9BY43 222 aa20.87■□□□□ 0.93
DDR1-246ENST00000485023 SRGNP10124 158 aa20.86■□□□□ 0.93
DDR1-246ENST00000485023 G2E3Q7L622 706 aa20.86■□□□□ 0.93
DDR1-246ENST00000485023 PDZRN3Q9UPQ7 1066 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms