RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 IQSEC3Q9UPP2 1182 aaPredicted RBP9.89□□□□□ -0.83
RIF1-210ENST00000484077 CLIP1P30622 1438 aa9.89□□□□□ -0.83
RIF1-210ENST00000484077 FYCO1Q9BQS8 1478 aa9.88□□□□□ -0.83
RIF1-210ENST00000484077 CSB-PGBD3P0DP91 1061 aa9.88□□□□□ -0.83
RIF1-210ENST00000484077 PHKA2P46019 1235 aa9.88□□□□□ -0.83
RIF1-210ENST00000484077 KRT76Q01546 638 aa9.88□□□□□ -0.83
RIF1-210ENST00000484077 CCDC102BQ68D86 513 aa9.88□□□□□ -0.83
RIF1-210ENST00000484077 PGBD3Q8N328 593 aa9.88□□□□□ -0.83
RIF1-210ENST00000484077 OGFOD1Q8N543 542 aa9.88□□□□□ -0.83
RIF1-210ENST00000484077 CNTNAP3BQ96NU0 1288 aa9.88□□□□□ -0.83
RIF1-210ENST00000484077 CNTNAP3Q9BZ76 1288 aa9.88□□□□□ -0.83
RIF1-210ENST00000484077 CRISPLD1Q9H336 500 aa9.88□□□□□ -0.83
RIF1-210ENST00000484077 RBM19Q9Y4C8 960 aaKnown RBP9.88□□□□□ -0.83
RIF1-210ENST00000484077 GTF3C3Q9Y5Q9 886 aa9.88□□□□□ -0.83
RIF1-210ENST00000484077 TEX14Q8IWB6 1497 aa9.87□□□□□ -0.83
RIF1-210ENST00000484077 KIF14Q15058 1648 aa9.87□□□□□ -0.83
RIF1-210ENST00000484077 MSX1P28360 303 aa9.87□□□□□ -0.83
RIF1-210ENST00000484077 CLDN10P78369 228 aa9.87□□□□□ -0.83
RIF1-210ENST00000484077 ZNF295-AS1Q8N0V1 137 aa9.87□□□□□ -0.83
RIF1-210ENST00000484077 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.87□□□□□ -0.83
RIF1-210ENST00000484077 TPCN2Q8NHX9 752 aa9.87□□□□□ -0.83
RIF1-210ENST00000484077 ZMYND15Q9H091 742 aa9.87□□□□□ -0.83
RIF1-210ENST00000484077 ZDHHC3Q9NYG2 299 aa9.87□□□□□ -0.83
RIF1-210ENST00000484077 SCHIP1Q9P0W5 487 aaPredicted RBP9.87□□□□□ -0.83
RIF1-210ENST00000484077 TTC37Q6PGP7 1564 aa9.87□□□□□ -0.83
RIF1-210ENST00000484077 CCDC18Q5T9S5 1454 aa9.86□□□□□ -0.83
RIF1-210ENST00000484077 SLURP2P0DP57 97 aa9.86□□□□□ -0.83
RIF1-210ENST00000484077 SRSF11Q05519 484 aaKnown RBP9.86□□□□□ -0.83
RIF1-210ENST00000484077 NBPF1Q3BBV0 1214 aa9.86□□□□□ -0.83
RIF1-210ENST00000484077 EFHC2Q5JST6 749 aa9.86□□□□□ -0.83
RIF1-210ENST00000484077 CEP162Q5TB80 1403 aa9.86□□□□□ -0.83
RIF1-210ENST00000484077 CFHR5Q9BXR6 569 aa9.86□□□□□ -0.83
RIF1-210ENST00000484077 CFAP74Q9C0B2 1584 aa9.86□□□□□ -0.83
RIF1-210ENST00000484077 PHF24Q9UPV7 400 aa9.86□□□□□ -0.83
RIF1-210ENST00000484077 MYO5CQ9NQX4 1742 aa9.85□□□□□ -0.83
RIF1-210ENST00000484077 PLA2G4AP47712 749 aa9.85□□□□□ -0.83
RIF1-210ENST00000484077 EPHA4P54764 986 aa9.85□□□□□ -0.83
RIF1-210ENST00000484077 FOXK2Q01167 660 aa9.85□□□□□ -0.83
RIF1-210ENST00000484077 RNFT1Q5M7Z0 435 aa9.85□□□□□ -0.83
RIF1-210ENST00000484077 MBIPQ9NS73 344 aa9.85□□□□□ -0.83
RIF1-210ENST00000484077 KIAA1024Q9UPX6 916 aa9.85□□□□□ -0.83
RIF1-210ENST00000484077 MAGI3Q5TCQ9 1506 aa9.85□□□□□ -0.83
RIF1-210ENST00000484077 CASKIN1Q8WXD9 1431 aa9.84□□□□□ -0.83
RIF1-210ENST00000484077 LARP1Q6PKG0 1096 aaKnown RBP9.84□□□□□ -0.83
RIF1-210ENST00000484077 GTPBP3Q969Y2 492 aaKnown RBP9.84□□□□□ -0.83
RIF1-210ENST00000484077 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.83□□□□□ -0.84
RIF1-210ENST00000484077 RASA1P20936 1047 aa9.83□□□□□ -0.84
RIF1-210ENST00000484077 GAS6Q14393 721 aa9.83□□□□□ -0.84
RIF1-210ENST00000484077 TEAD4Q15561 434 aa9.83□□□□□ -0.84
RIF1-210ENST00000484077 FIGNL1Q6PIW4 674 aa9.83□□□□□ -0.84
RIF1-210ENST00000484077 NLRP8Q86W28 1048 aa9.83□□□□□ -0.84
RIF1-210ENST00000484077 GPAMQ9HCL2 828 aa9.83□□□□□ -0.84
RIF1-210ENST00000484077 CABP1Q9NZU7 370 aa9.83□□□□□ -0.84
RIF1-210ENST00000484077 ZNF777Q9ULD5 760 aaPredicted RBP9.83□□□□□ -0.84
RIF1-210ENST00000484077 NSFL1CQ9UNZ2 370 aaKnown RBP9.83□□□□□ -0.84
RIF1-210ENST00000484077 FAM196BA6NMK8 535 aa9.82□□□□□ -0.84
RIF1-210ENST00000484077 TATP17735 454 aaPredicted RBP9.82□□□□□ -0.84
RIF1-210ENST00000484077 VRTNQ9H8Y1 702 aa9.82□□□□□ -0.84
RIF1-210ENST00000484077 GPC6Q9Y625 555 aaPredicted RBP9.82□□□□□ -0.84
RIF1-210ENST00000484077 DKK1O94907 266 aa9.81□□□□□ -0.84
RIF1-210ENST00000484077 ATP4AP20648 1035 aa9.81□□□□□ -0.84
RIF1-210ENST00000484077 LMOD1P29536 600 aaPredicted RBP9.81□□□□□ -0.84
RIF1-210ENST00000484077 KANK4Q5T7N3 995 aaPredicted RBP9.81□□□□□ -0.84
RIF1-210ENST00000484077 RUBCNLQ9H714 662 aa9.81□□□□□ -0.84
RIF1-210ENST00000484077 CD109Q6YHK3 1445 aa9.81□□□□□ -0.84
RIF1-210ENST00000484077 THBS1P07996 1170 aa9.8□□□□□ -0.84
RIF1-210ENST00000484077 SEC13P55735 322 aa9.8□□□□□ -0.84
RIF1-210ENST00000484077 UBAP2LQ14157 1087 aaKnown RBP9.8□□□□□ -0.84
RIF1-210ENST00000484077 SLC9A9Q8IVB4 645 aa9.8□□□□□ -0.84
RIF1-210ENST00000484077 GAS2L2Q8NHY3 880 aa9.8□□□□□ -0.84
RIF1-210ENST00000484077 AIDAQ96BJ3 306 aa9.8□□□□□ -0.84
RIF1-210ENST00000484077 ATXN7L1Q9ULK2 861 aaPredicted RBP9.8□□□□□ -0.84
RIF1-210ENST00000484077 CHMP3Q9Y3E7 222 aa9.8□□□□□ -0.84
RIF1-210ENST00000484077 USP3Q9Y6I4 520 aa9.8□□□□□ -0.84
RIF1-210ENST00000484077 PREX2Q70Z35 1606 aa9.8□□□□□ -0.84
RIF1-210ENST00000484077 ADAMTS2O95450 1211 aa9.79□□□□□ -0.84
RIF1-210ENST00000484077 PSMA6P60900 246 aaKnown RBP9.79□□□□□ -0.84
RIF1-210ENST00000484077 PTK7Q13308 1070 aa9.79□□□□□ -0.84
RIF1-210ENST00000484077 CFAP70Q5T0N1 1121 aa9.79□□□□□ -0.84
RIF1-210ENST00000484077 POTEAQ6S8J7 498 aa9.79□□□□□ -0.84
RIF1-210ENST00000484077 TNS4Q8IZW8 715 aa9.79□□□□□ -0.84
RIF1-210ENST00000484077 ZNF594Q96JF6 807 aaPredicted RBP9.79□□□□□ -0.84
RIF1-210ENST00000484077 TROQ12816 1431 aaPredicted RBP9.79□□□□□ -0.84
RIF1-210ENST00000484077 FRMPD1Q5SYB0 1578 aa9.79□□□□□ -0.84
RIF1-210ENST00000484077 COL17A1Q9UMD9 1497 aaPredicted RBP9.79□□□□□ -0.84
RIF1-210ENST00000484077 GPR25O00155 361 aa9.78□□□□□ -0.84
RIF1-210ENST00000484077 MX2P20592 715 aa9.78□□□□□ -0.84
RIF1-210ENST00000484077 NOS2P35228 1153 aa9.78□□□□□ -0.84
RIF1-210ENST00000484077 MAP2K3P46734 347 aa9.78□□□□□ -0.84
RIF1-210ENST00000484077 HIRAP54198 1017 aaPredicted RBP9.78□□□□□ -0.84
RIF1-210ENST00000484077 STAG2Q8N3U4 1231 aa9.78□□□□□ -0.84
RIF1-210ENST00000484077 L3MBTL2Q969R5 705 aa9.78□□□□□ -0.84
RIF1-210ENST00000484077 CDC42BPAQ5VT25 1732 aa9.78□□□□□ -0.84
RIF1-210ENST00000484077 RICTORQ6R327 1708 aa9.78□□□□□ -0.84
RIF1-210ENST00000484077 EHBP1L1Q8N3D4 1523 aa9.77□□□□□ -0.84
RIF1-210ENST00000484077 ARAP3Q8WWN8 1544 aa9.77□□□□□ -0.84
RIF1-210ENST00000484077 SERTM1A2A2V5 107 aa9.77□□□□□ -0.85
RIF1-210ENST00000484077 USP17L15C9J2P7 530 aa9.77□□□□□ -0.85
RIF1-210ENST00000484077 USP17L10C9JJH3 530 aa9.77□□□□□ -0.85
RIF1-210ENST00000484077 USP17L13C9JLJ4 530 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms