RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 PIK3C2GO75747 1445 aa8.93□□□□□ -0.98
SEMA3D-204ENST00000484038 YTHDC2Q9H6S0 1430 aaKnown RBP8.93□□□□□ -0.98
SEMA3D-204ENST00000484038 WNT7BP56706 349 aa8.93□□□□□ -0.98
SEMA3D-204ENST00000484038 TMEM132AQ24JP5 1023 aa8.93□□□□□ -0.98
SEMA3D-204ENST00000484038 KRT27Q7Z3Y8 459 aa8.93□□□□□ -0.98
SEMA3D-204ENST00000484038 ZNF511Q8NB15 262 aa8.93□□□□□ -0.98
SEMA3D-204ENST00000484038 ARMC2Q8NEN0 867 aa8.93□□□□□ -0.98
SEMA3D-204ENST00000484038 HMX1Q9NP08 348 aaPredicted RBP8.93□□□□□ -0.98
SEMA3D-204ENST00000484038 SPATA31E1Q6ZUB1 1445 aa8.92□□□□□ -0.98
SEMA3D-204ENST00000484038 SH3BP2P78314 561 aa8.92□□□□□ -0.98
SEMA3D-204ENST00000484038 SKOR1P84550 965 aa8.92□□□□□ -0.98
SEMA3D-204ENST00000484038 PSME1Q06323 249 aa8.92□□□□□ -0.98
SEMA3D-204ENST00000484038 EHBP1Q8NDI1 1231 aa8.92□□□□□ -0.98
SEMA3D-204ENST00000484038 ARHGEF10O15013 1369 aa8.92□□□□□ -0.98
SEMA3D-204ENST00000484038 BAG6P46379 1132 aa8.91□□□□□ -0.98
SEMA3D-204ENST00000484038 SAFB2Q14151 953 aaKnown RBP eCLIP8.91□□□□□ -0.98
SEMA3D-204ENST00000484038 RC3H1Q5TC82 1133 aaKnown RBP8.91□□□□□ -0.98
SEMA3D-204ENST00000484038 NBPF14Q5TI25 921 aa8.91□□□□□ -0.98
SEMA3D-204ENST00000484038 NRXN1Q9ULB1 1477 aa8.91□□□□□ -0.98
SEMA3D-204ENST00000484038 NRAPQ86VF7 1730 aa8.9□□□□□ -0.98
SEMA3D-204ENST00000484038 GDF9O60383 454 aa8.9□□□□□ -0.98
SEMA3D-204ENST00000484038 TRIM67Q6ZTA4 783 aa8.9□□□□□ -0.98
SEMA3D-204ENST00000484038 PNMA1Q8ND90 353 aa8.9□□□□□ -0.98
SEMA3D-204ENST00000484038 MRGPRX2Q96LB1 330 aa8.9□□□□□ -0.98
SEMA3D-204ENST00000484038 PKD2L1Q9P0L9 805 aa8.9□□□□□ -0.98
SEMA3D-204ENST00000484038 SBNO1A3KN83 1393 aa8.9□□□□□ -0.98
SEMA3D-204ENST00000484038 TTC24A2A3L6 582 aaPredicted RBP8.9□□□□□ -0.99
SEMA3D-204ENST00000484038 FAM83GA6ND36 823 aa8.9□□□□□ -0.99
SEMA3D-204ENST00000484038 WNT7AO00755 349 aa8.9□□□□□ -0.99
SEMA3D-204ENST00000484038 LAPTM4AQ15012 233 aa8.9□□□□□ -0.99
SEMA3D-204ENST00000484038 CYP4X1Q8N118 509 aa8.9□□□□□ -0.99
SEMA3D-204ENST00000484038 NRG2O14511 850 aaPredicted RBP8.89□□□□□ -0.99
SEMA3D-204ENST00000484038 PRR20EP86478 221 aa8.89□□□□□ -0.99
SEMA3D-204ENST00000484038 PRR20CP86479 221 aa8.89□□□□□ -0.99
SEMA3D-204ENST00000484038 PRR20DP86480 221 aa8.89□□□□□ -0.99
SEMA3D-204ENST00000484038 PRR20BP86481 221 aa8.89□□□□□ -0.99
SEMA3D-204ENST00000484038 PRR20AP86496 221 aa8.89□□□□□ -0.99
SEMA3D-204ENST00000484038 PMFBP1Q8TBY8 1022 aa8.89□□□□□ -0.99
SEMA3D-204ENST00000484038 EPS8L1Q8TE68 723 aa8.89□□□□□ -0.99
SEMA3D-204ENST00000484038 PRAM1Q96QH2 718 aa8.89□□□□□ -0.99
SEMA3D-204ENST00000484038 FKBPLQ9UIM3 349 aa8.89□□□□□ -0.99
SEMA3D-204ENST00000484038 RGPD1P0DJD0 1748 aa8.89□□□□□ -0.99
SEMA3D-204ENST00000484038 DHX57Q6P158 1386 aaKnown RBP8.88□□□□□ -0.99
SEMA3D-204ENST00000484038 FAM182BQ5T319 152 aa8.88□□□□□ -0.99
SEMA3D-204ENST00000484038 BANK1Q8NDB2 785 aa8.88□□□□□ -0.99
SEMA3D-204ENST00000484038 MPHOSPH9Q99550 1183 aa8.88□□□□□ -0.99
SEMA3D-204ENST00000484038 BTG4Q9NY30 223 aa8.88□□□□□ -0.99
SEMA3D-204ENST00000484038 COL14A1Q05707 1796 aaKnown RBP8.88□□□□□ -0.99
SEMA3D-204ENST00000484038 TRPM3Q9HCF6 1732 aaPredicted RBP8.87□□□□□ -0.99
SEMA3D-204ENST00000484038 MAGEB6P1A0A0J9YX57 407 aa8.87□□□□□ -0.99
SEMA3D-204ENST00000484038 FAM187AA6NFU0 413 aa8.87□□□□□ -0.99
SEMA3D-204ENST00000484038 APBB1O00213 710 aa8.87□□□□□ -0.99
SEMA3D-204ENST00000484038 CFAP70Q5T0N1 1121 aa8.87□□□□□ -0.99
SEMA3D-204ENST00000484038 Q6ZNB5 142 aa8.87□□□□□ -0.99
SEMA3D-204ENST00000484038 FOXJ1Q92949 421 aa8.87□□□□□ -0.99
SEMA3D-204ENST00000484038 CARD14Q9BXL6 1004 aa8.87□□□□□ -0.99
SEMA3D-204ENST00000484038 POGKQ9P215 609 aa8.87□□□□□ -0.99
SEMA3D-204ENST00000484038 ANKARQ7Z5J8 1434 aa8.86□□□□□ -0.99
SEMA3D-204ENST00000484038 R3HDM1Q15032 1099 aaKnown RBP8.86□□□□□ -0.99
SEMA3D-204ENST00000484038 BPHLQ86WA6 291 aaPredicted RBP8.86□□□□□ -0.99
SEMA3D-204ENST00000484038 SIRT1Q96EB6 747 aa8.86□□□□□ -0.99
SEMA3D-204ENST00000484038 C14orf93Q9H972 538 aaKnown RBP8.86□□□□□ -0.99
SEMA3D-204ENST00000484038 SNRKQ9NRH2 765 aa8.86□□□□□ -0.99
SEMA3D-204ENST00000484038 TNS1Q9HBL0 1735 aaKnown RBP8.86□□□□□ -0.99
SEMA3D-204ENST00000484038 ADGRB2O60241 1585 aa8.86□□□□□ -0.99
SEMA3D-204ENST00000484038 ALS2Q96Q42 1657 aa8.86□□□□□ -0.99
SEMA3D-204ENST00000484038 PKDCCQ504Y2 493 aa8.85□□□□□ -0.99
SEMA3D-204ENST00000484038 GPKOWQ92917 476 aaPredicted RBP eCLIP8.85□□□□□ -0.99
SEMA3D-204ENST00000484038 HIRIP3Q9BW71 556 aaPredicted RBP8.85□□□□□ -0.99
SEMA3D-204ENST00000484038 GPRASP1Q5JY77 1395 aa8.85□□□□□ -0.99
SEMA3D-204ENST00000484038 DLC1Q96QB1 1528 aa8.85□□□□□ -0.99
SEMA3D-204ENST00000484038 THSD7AQ9UPZ6 1657 aa8.85□□□□□ -0.99
SEMA3D-204ENST00000484038 VARSP26640 1264 aaKnown RBP8.85□□□□□ -0.99
SEMA3D-204ENST00000484038 MTMR14Q8NCE2 650 aa8.85□□□□□ -0.99
SEMA3D-204ENST00000484038 SNIP1Q8TAD8 396 aaKnown RBP8.85□□□□□ -0.99
SEMA3D-204ENST00000484038 ACIN1Q9UKV3 1341 aaKnown RBP8.84□□□□□ -0.99
SEMA3D-204ENST00000484038 ALDH1A1P00352 501 aa8.84□□□□□ -0.99
SEMA3D-204ENST00000484038 FAM174AQ8TBP5 190 aa8.84□□□□□ -0.99
SEMA3D-204ENST00000484038 ARHGAP9Q9BRR9 750 aa8.84□□□□□ -0.99
SEMA3D-204ENST00000484038 TRIM34Q9BYJ4 488 aa8.84□□□□□ -0.99
SEMA3D-204ENST00000484038 PRDM11Q9NQV5 511 aa8.84□□□□□ -0.99
SEMA3D-204ENST00000484038 TLL2Q9Y6L7 1015 aa8.84□□□□□ -0.99
SEMA3D-204ENST00000484038 CRYBG1Q9Y4K1 1723 aa8.84□□□□□ -0.99
SEMA3D-204ENST00000484038 TULP4Q9NRJ4 1543 aa8.84□□□□□ -1
SEMA3D-204ENST00000484038 SPATA31A5Q5VU36 1347 aa8.83□□□□□ -1
SEMA3D-204ENST00000484038 SPATA31A7Q8IWB4 1347 aa8.83□□□□□ -1
SEMA3D-204ENST00000484038 ZC3H4Q9UPT8 1303 aaKnown RBP8.83□□□□□ -1
SEMA3D-204ENST00000484038 EIF3AQ14152 1382 aaKnown RBP8.83□□□□□ -1
SEMA3D-204ENST00000484038 ARID5BQ14865 1188 aa8.83□□□□□ -1
SEMA3D-204ENST00000484038 EZH2Q15910 746 aaKnown RBP8.83□□□□□ -1
SEMA3D-204ENST00000484038 TRAK1Q9UPV9 953 aa8.83□□□□□ -1
SEMA3D-204ENST00000484038 DISP2A7MBM2 1401 aa8.83□□□□□ -1
SEMA3D-204ENST00000484038 TRIM37O94972 964 aa8.82□□□□□ -1
SEMA3D-204ENST00000484038 PTK2Q05397 1052 aa8.82□□□□□ -1
SEMA3D-204ENST00000484038 PDXDC2PQ6P474 469 aa8.82□□□□□ -1
SEMA3D-204ENST00000484038 ZBTB33Q86T24 672 aa8.82□□□□□ -1
SEMA3D-204ENST00000484038 NGDNQ8NEJ9 315 aaKnown RBP8.82□□□□□ -1
SEMA3D-204ENST00000484038 PRM3Q9NNZ6 103 aa8.82□□□□□ -1
SEMA3D-204ENST00000484038 STRN4Q9NRL3 753 aa8.82□□□□□ -1
SEMA3D-204ENST00000484038 TOR4AQ9NXH8 423 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms