RNA–Protein interactions for RNA: ENST00000484006.1

THUMPD3-209, Transcript of THUMP domain containing 3, humanhuman

TSL 4

Gene THUMPD3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-209ENST00000484006 GTF2IP78347 998 aa8.71□□□□□ -1.02
THUMPD3-209ENST00000484006 PSME1Q06323 249 aa8.71□□□□□ -1.02
THUMPD3-209ENST00000484006 BICDL1Q6ZP65 573 aa8.71□□□□□ -1.02
THUMPD3-209ENST00000484006 AVENQ9NQS1 362 aaPredicted RBP8.71□□□□□ -1.02
THUMPD3-209ENST00000484006 SNAPC4Q5SXM2 1469 aa8.7□□□□□ -1.02
THUMPD3-209ENST00000484006 DCDC2BA2VCK2 349 aa8.7□□□□□ -1.02
THUMPD3-209ENST00000484006 NCOA4Q13772 614 aa8.7□□□□□ -1.02
THUMPD3-209ENST00000484006 LINC00114Q6XXX2 140 aa8.7□□□□□ -1.02
THUMPD3-209ENST00000484006 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.7□□□□□ -1.02
THUMPD3-209ENST00000484006 GRIN2BQ13224 1484 aa8.7□□□□□ -1.02
THUMPD3-209ENST00000484006 RUSC2Q8N2Y8 1516 aa8.7□□□□□ -1.02
THUMPD3-209ENST00000484006 KRBA1A5PL33 1030 aa8.69□□□□□ -1.02
THUMPD3-209ENST00000484006 ADH6P28332 368 aa8.69□□□□□ -1.02
THUMPD3-209ENST00000484006 SCHIP1Q9P0W5 487 aaPredicted RBP8.69□□□□□ -1.02
THUMPD3-209ENST00000484006 USP3Q9Y6I4 520 aa8.69□□□□□ -1.02
THUMPD3-209ENST00000484006 GNB5O14775 395 aa8.68□□□□□ -1.02
THUMPD3-209ENST00000484006 PROCP04070 461 aa8.68□□□□□ -1.02
THUMPD3-209ENST00000484006 FAM157BP0CG42 384 aa8.68□□□□□ -1.02
THUMPD3-209ENST00000484006 PRKCSHP14314 528 aaPredicted RBP8.68□□□□□ -1.02
THUMPD3-209ENST00000484006 HOXB4P17483 251 aaPredicted RBP8.68□□□□□ -1.02
THUMPD3-209ENST00000484006 CD33P20138 364 aa8.68□□□□□ -1.02
THUMPD3-209ENST00000484006 RANGAP1P46060 587 aaPredicted RBP8.68□□□□□ -1.02
THUMPD3-209ENST00000484006 FLIIQ13045 1269 aa8.68□□□□□ -1.02
THUMPD3-209ENST00000484006 SAMD5Q5TGI4 173 aa8.68□□□□□ -1.02
THUMPD3-209ENST00000484006 TRIM50Q86XT4 487 aa8.68□□□□□ -1.02
THUMPD3-209ENST00000484006 ZNF358Q9NW07 568 aa8.68□□□□□ -1.02
THUMPD3-209ENST00000484006 MARK1Q9P0L2 795 aa8.68□□□□□ -1.02
THUMPD3-209ENST00000484006 PRR12Q9ULL5 1215 aa8.68□□□□□ -1.02
THUMPD3-209ENST00000484006 PARP3Q9Y6F1 533 aa8.68□□□□□ -1.02
THUMPD3-209ENST00000484006 WDR97A6NE52 1622 aa8.67□□□□□ -1.02
THUMPD3-209ENST00000484006 COL8A1P27658 744 aa8.67□□□□□ -1.02
THUMPD3-209ENST00000484006 NOS2P35228 1153 aa8.67□□□□□ -1.02
THUMPD3-209ENST00000484006 LAMC2Q13753 1193 aa8.67□□□□□ -1.02
THUMPD3-209ENST00000484006 GRIN2CQ14957 1233 aa8.67□□□□□ -1.02
THUMPD3-209ENST00000484006 TEAD4Q15561 434 aa8.67□□□□□ -1.02
THUMPD3-209ENST00000484006 L3MBTL2Q969R5 705 aa8.67□□□□□ -1.02
THUMPD3-209ENST00000484006 POM121Q96HA1 1249 aa8.67□□□□□ -1.02
THUMPD3-209ENST00000484006 NEUROD4Q9HD90 331 aa8.67□□□□□ -1.02
THUMPD3-209ENST00000484006 PBRM1Q86U86 1689 aa8.66□□□□□ -1.02
THUMPD3-209ENST00000484006 USP17L5A8MUK1 530 aa8.66□□□□□ -1.02
THUMPD3-209ENST00000484006 ADAM23O75077 832 aa8.66□□□□□ -1.02
THUMPD3-209ENST00000484006 NOP53Q9NZM5 478 aaKnown RBP8.66□□□□□ -1.02
THUMPD3-209ENST00000484006 ABCA5Q8WWZ7 1642 aa8.65□□□□□ -1.02
THUMPD3-209ENST00000484006 UBTFP17480 764 aaKnown RBP8.65□□□□□ -1.02
THUMPD3-209ENST00000484006 TXLNAP40222 546 aa8.65□□□□□ -1.02
THUMPD3-209ENST00000484006 ATP1A2P50993 1020 aa8.65□□□□□ -1.02
THUMPD3-209ENST00000484006 CHSY3Q70JA7 882 aa8.65□□□□□ -1.02
THUMPD3-209ENST00000484006 DEPDC4Q8N2C3 294 aa8.65□□□□□ -1.02
THUMPD3-209ENST00000484006 SUV39H2Q9H5I1 410 aa8.65□□□□□ -1.02
THUMPD3-209ENST00000484006 KLF15Q9UIH9 416 aa8.65□□□□□ -1.02
THUMPD3-209ENST00000484006 TTBK1Q5TCY1 1321 aaPredicted RBP8.64□□□□□ -1.03
THUMPD3-209ENST00000484006 DGKGP49619 791 aa8.64□□□□□ -1.03
THUMPD3-209ENST00000484006 HCN2Q9UL51 889 aa8.64□□□□□ -1.03
THUMPD3-209ENST00000484006 ZNF232Q9UNY5 417 aa8.64□□□□□ -1.03
THUMPD3-209ENST00000484006 GPC6Q9Y625 555 aaPredicted RBP8.64□□□□□ -1.03
THUMPD3-209ENST00000484006 CARMIL1Q5VZK9 1371 aa8.63□□□□□ -1.03
THUMPD3-209ENST00000484006 EML1O00423 815 aa8.63□□□□□ -1.03
THUMPD3-209ENST00000484006 EPHA4P54764 986 aa8.63□□□□□ -1.03
THUMPD3-209ENST00000484006 PCBP4P57723 403 aaKnown RBP8.63□□□□□ -1.03
THUMPD3-209ENST00000484006 ZNF468Q5VIY5 522 aaPredicted RBP8.63□□□□□ -1.03
THUMPD3-209ENST00000484006 FCHSD1Q86WN1 690 aa8.63□□□□□ -1.03
THUMPD3-209ENST00000484006 SLC9A9Q8IVB4 645 aa8.63□□□□□ -1.03
THUMPD3-209ENST00000484006 PLEKHM2Q8IWE5 1019 aa8.63□□□□□ -1.03
THUMPD3-209ENST00000484006 TNS4Q8IZW8 715 aa8.63□□□□□ -1.03
THUMPD3-209ENST00000484006 ZDHHC1Q8WTX9 485 aa8.63□□□□□ -1.03
THUMPD3-209ENST00000484006 SERTM1A2A2V5 107 aa8.62□□□□□ -1.03
THUMPD3-209ENST00000484006 ZBTB7BO15156 539 aaPredicted RBP8.62□□□□□ -1.03
THUMPD3-209ENST00000484006 EFSO43281 561 aa8.62□□□□□ -1.03
THUMPD3-209ENST00000484006 ALAS2P22557 587 aa8.62□□□□□ -1.03
THUMPD3-209ENST00000484006 BAG6P46379 1132 aa8.62□□□□□ -1.03
THUMPD3-209ENST00000484006 HDGFL1Q5TGJ6 251 aa8.62□□□□□ -1.03
THUMPD3-209ENST00000484006 CCDC102BQ68D86 513 aa8.62□□□□□ -1.03
THUMPD3-209ENST00000484006 CHMP3Q9Y3E7 222 aa8.62□□□□□ -1.03
THUMPD3-209ENST00000484006 MAGI1Q96QZ7 1491 aaPredicted RBP8.62□□□□□ -1.03
THUMPD3-209ENST00000484006 FHAD1B1AJZ9 1412 aa8.62□□□□□ -1.03
THUMPD3-209ENST00000484006 CHD1O14646 1710 aa8.61□□□□□ -1.03
THUMPD3-209ENST00000484006 TBCELQ5QJ74 424 aa8.61□□□□□ -1.03
THUMPD3-209ENST00000484006 LRRC69Q6ZNQ3 347 aa8.61□□□□□ -1.03
THUMPD3-209ENST00000484006 TPCN2Q8NHX9 752 aa8.61□□□□□ -1.03
THUMPD3-209ENST00000484006 STRN4Q9NRL3 753 aa8.61□□□□□ -1.03
THUMPD3-209ENST00000484006 SYNJ2O15056 1496 aa8.61□□□□□ -1.03
THUMPD3-209ENST00000484006 ERICH3Q5RHP9 1530 aa8.6□□□□□ -1.03
THUMPD3-209ENST00000484006 USP17L3A6NCW0 530 aa8.6□□□□□ -1.03
THUMPD3-209ENST00000484006 USP17L4A6NCW7 530 aa8.6□□□□□ -1.03
THUMPD3-209ENST00000484006 POM121CA8CG34 1229 aa8.6□□□□□ -1.03
THUMPD3-209ENST00000484006 USP17L2Q6R6M4 530 aa8.6□□□□□ -1.03
THUMPD3-209ENST00000484006 USP17L1Q7RTZ2 530 aa8.6□□□□□ -1.03
THUMPD3-209ENST00000484006 C7orf43Q8WVR3 580 aa8.6□□□□□ -1.03
THUMPD3-209ENST00000484006 ADAMTS12P58397 1594 aa8.6□□□□□ -1.03
THUMPD3-209ENST00000484006 ELOA3CA0A087WX78 387 aaPredicted RBP8.59□□□□□ -1.03
THUMPD3-209ENST00000484006 ELOA3DA6NLF2 546 aaPredicted RBP8.59□□□□□ -1.03
THUMPD3-209ENST00000484006 C1QTNF9BB2RNN3 333 aa8.59□□□□□ -1.03
THUMPD3-209ENST00000484006 K7ELQ4 463 aaPredicted RBP8.59□□□□□ -1.03
THUMPD3-209ENST00000484006 ATP9BO43861 1147 aa8.59□□□□□ -1.03
THUMPD3-209ENST00000484006 ELOA3BQ3SY89 546 aa8.59□□□□□ -1.03
THUMPD3-209ENST00000484006 SYT9Q86SS6 491 aa8.59□□□□□ -1.03
THUMPD3-209ENST00000484006 LARGE2Q8N3Y3 721 aa8.59□□□□□ -1.03
THUMPD3-209ENST00000484006 ELOA3Q8NG57 546 aa8.59□□□□□ -1.03
THUMPD3-209ENST00000484006 ANKIB1Q9P2G1 1089 aa8.59□□□□□ -1.03
THUMPD3-209ENST00000484006 RBM19Q9Y4C8 960 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms