RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 ZBTB39O15060 712 aa12.7□□□□□ -0.38
MCF2-207ENST00000483690 DGAT1O75907 488 aa12.7□□□□□ -0.38
MCF2-207ENST00000483690 FAM26DQ5JW98 314 aa12.7□□□□□ -0.38
MCF2-207ENST00000483690 ETFBKMTQ8IXQ9 262 aa12.7□□□□□ -0.38
MCF2-207ENST00000483690 TMC1Q8TDI8 760 aa12.7□□□□□ -0.38
MCF2-207ENST00000483690 CITED4Q96RK1 184 aa12.7□□□□□ -0.38
MCF2-207ENST00000483690 FZD6O60353 706 aa12.69□□□□□ -0.38
MCF2-207ENST00000483690 CCDC87Q9NVE4 849 aa12.69□□□□□ -0.38
MCF2-207ENST00000483690 GPC6Q9Y625 555 aaPredicted RBP12.69□□□□□ -0.38
MCF2-207ENST00000483690 SMCPP49901 116 aaPredicted RBP12.68□□□□□ -0.38
MCF2-207ENST00000483690 ATCAYQ86WG3 371 aa12.68□□□□□ -0.38
MCF2-207ENST00000483690 E9PSI1 815 aa12.67□□□□□ -0.38
MCF2-207ENST00000483690 ZAP70P43403 619 aa12.67□□□□□ -0.38
MCF2-207ENST00000483690 BICDL1Q6ZP65 573 aa12.67□□□□□ -0.38
MCF2-207ENST00000483690 TMC7Q7Z402 723 aa12.67□□□□□ -0.38
MCF2-207ENST00000483690 SOS2Q07890 1332 aaPredicted RBP12.66□□□□□ -0.38
MCF2-207ENST00000483690 A0A1B0GTH6 734 aa12.66□□□□□ -0.38
MCF2-207ENST00000483690 FIGNL2A6NMB9 653 aa12.66□□□□□ -0.38
MCF2-207ENST00000483690 NRG2O14511 850 aaPredicted RBP12.66□□□□□ -0.38
MCF2-207ENST00000483690 AXIN1O15169 862 aa12.66□□□□□ -0.38
MCF2-207ENST00000483690 GFRA3O60609 400 aa12.66□□□□□ -0.38
MCF2-207ENST00000483690 RHOQP17081 205 aa12.66□□□□□ -0.38
MCF2-207ENST00000483690 TRIM46Q7Z4K8 759 aa12.66□□□□□ -0.38
MCF2-207ENST00000483690 TREML1Q86YW5 311 aa12.66□□□□□ -0.38
MCF2-207ENST00000483690 GIPC2Q8TF65 315 aa12.66□□□□□ -0.38
MCF2-207ENST00000483690 TIMMDC1Q9NPL8 285 aa12.66□□□□□ -0.38
MCF2-207ENST00000483690 PDE3BQ13370 1112 aa12.65□□□□□ -0.38
MCF2-207ENST00000483690 C7orf43Q8WVR3 580 aa12.65□□□□□ -0.38
MCF2-207ENST00000483690 TGFBR3LH3BV60 316 aa12.64□□□□□ -0.39
MCF2-207ENST00000483690 ATP4AP20648 1035 aa12.64□□□□□ -0.39
MCF2-207ENST00000483690 MZF1P28698 734 aaPredicted RBP12.64□□□□□ -0.39
MCF2-207ENST00000483690 DNM1Q05193 864 aaKnown RBP12.64□□□□□ -0.39
MCF2-207ENST00000483690 COL19A1Q14993 1142 aa12.64□□□□□ -0.39
MCF2-207ENST00000483690 SUSD3Q96L08 255 aa12.64□□□□□ -0.39
MCF2-207ENST00000483690 DMRTB1Q96MA1 342 aa12.64□□□□□ -0.39
MCF2-207ENST00000483690 ZFP42Q96MM3 310 aa12.64□□□□□ -0.39
MCF2-207ENST00000483690 NEUROD4Q9HD90 331 aa12.64□□□□□ -0.39
MCF2-207ENST00000483690 ANKIB1Q9P2G1 1089 aa12.64□□□□□ -0.39
MCF2-207ENST00000483690 POLIQ9UNA4 740 aa12.64□□□□□ -0.39
MCF2-207ENST00000483690 BCS1LQ9Y276 419 aa12.64□□□□□ -0.39
MCF2-207ENST00000483690 ZNF16P17020 682 aaPredicted RBP12.63□□□□□ -0.39
MCF2-207ENST00000483690 USP5P45974 858 aa12.63□□□□□ -0.39
MCF2-207ENST00000483690 ZNF326Q5BKZ1 582 aaKnown RBP12.63□□□□□ -0.39
MCF2-207ENST00000483690 ARSJQ5FYB0 599 aaPredicted RBP12.63□□□□□ -0.39
MCF2-207ENST00000483690 EDEM1Q92611 657 aa12.63□□□□□ -0.39
MCF2-207ENST00000483690 FAM13BQ9NYF5 915 aa12.63□□□□□ -0.39
MCF2-207ENST00000483690 MICAL2O94851 1124 aa12.62□□□□□ -0.39
MCF2-207ENST00000483690 MSX1P28360 303 aa12.62□□□□□ -0.39
MCF2-207ENST00000483690 CRIPAKQ8N1N5 446 aa12.62□□□□□ -0.39
MCF2-207ENST00000483690 PCSK2P16519 638 aa12.61□□□□□ -0.39
MCF2-207ENST00000483690 EAPPQ56P03 285 aaPredicted RBP12.61□□□□□ -0.39
MCF2-207ENST00000483690 IER5Q5VY09 327 aa12.61□□□□□ -0.39
MCF2-207ENST00000483690 HSH2DQ96JZ2 352 aa12.61□□□□□ -0.39
MCF2-207ENST00000483690 FAM129BQ96TA1 746 aa12.61□□□□□ -0.39
MCF2-207ENST00000483690 IRX2Q9BZI1 471 aaPredicted RBP12.61□□□□□ -0.39
MCF2-207ENST00000483690 TREHO43280 583 aa12.6□□□□□ -0.39
MCF2-207ENST00000483690 PDGFAP04085 211 aa12.6□□□□□ -0.39
MCF2-207ENST00000483690 FBXO33Q7Z6M2 555 aa12.6□□□□□ -0.39
MCF2-207ENST00000483690 ZNF280CQ8ND82 737 aa12.6□□□□□ -0.39
MCF2-207ENST00000483690 GPR152Q8TDT2 470 aa12.6□□□□□ -0.39
MCF2-207ENST00000483690 ZIC5Q96T25 663 aa12.6□□□□□ -0.39
MCF2-207ENST00000483690 UNCXA6NJT0 531 aa12.59□□□□□ -0.39
MCF2-207ENST00000483690 GJD3Q8N144 294 aa12.59□□□□□ -0.39
MCF2-207ENST00000483690 TTC16Q8NEE8 873 aa12.59□□□□□ -0.39
MCF2-207ENST00000483690 KLRG1Q96E93 195 aa12.59□□□□□ -0.39
MCF2-207ENST00000483690 DNMT3LQ9UJW3 386 aa12.59□□□□□ -0.39
MCF2-207ENST00000483690 PLCB3Q01970 1234 aa12.58□□□□□ -0.4
MCF2-207ENST00000483690 LAPTM4AQ15012 233 aa12.58□□□□□ -0.4
MCF2-207ENST00000483690 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.58□□□□□ -0.4
MCF2-207ENST00000483690 GJA3Q9Y6H8 435 aa12.58□□□□□ -0.4
MCF2-207ENST00000483690 A0A1W2PNR3 127 aa12.57□□□□□ -0.4
MCF2-207ENST00000483690 P4HBP07237 508 aaKnown RBP12.57□□□□□ -0.4
MCF2-207ENST00000483690 IDH3AP50213 366 aa12.57□□□□□ -0.4
MCF2-207ENST00000483690 LRRC69Q6ZNQ3 347 aa12.57□□□□□ -0.4
MCF2-207ENST00000483690 PIK3R5Q8WYR1 880 aa12.57□□□□□ -0.4
MCF2-207ENST00000483690 NUDT16Q96DE0 195 aaKnown RBP12.57□□□□□ -0.4
MCF2-207ENST00000483690 GPAMQ9HCL2 828 aa12.57□□□□□ -0.4
MCF2-207ENST00000483690 DYRK1BQ9Y463 629 aa12.57□□□□□ -0.4
MCF2-207ENST00000483690 GPR182O15218 404 aa12.56□□□□□ -0.4
MCF2-207ENST00000483690 MAN1A2O60476 641 aa12.56□□□□□ -0.4
MCF2-207ENST00000483690 RPLP1P05386 114 aaKnown RBP12.56□□□□□ -0.4
MCF2-207ENST00000483690 FMR1Q06787 632 aaKnown RBP eCLIP12.56□□□□□ -0.4
MCF2-207ENST00000483690 PGBD3Q8N328 593 aa12.56□□□□□ -0.4
MCF2-207ENST00000483690 DMGDHQ9UI17 866 aaKnown RBP12.56□□□□□ -0.4
MCF2-207ENST00000483690 EHHADHQ08426 723 aa12.55□□□□□ -0.4
MCF2-207ENST00000483690 DSC3Q14574 896 aa12.55□□□□□ -0.4
MCF2-207ENST00000483690 BTLAQ7Z6A9 289 aa12.55□□□□□ -0.4
MCF2-207ENST00000483690 ALKBH8Q96BT7 664 aaKnown RBP12.55□□□□□ -0.4
MCF2-207ENST00000483690 BCL11AQ9H165 835 aa12.55□□□□□ -0.4
MCF2-207ENST00000483690 ATP13A2Q9NQ11 1180 aa12.55□□□□□ -0.4
MCF2-207ENST00000483690 OPLAHO14841 1288 aa12.54□□□□□ -0.4
MCF2-207ENST00000483690 IGHA2P01877 340 aa12.54□□□□□ -0.4
MCF2-207ENST00000483690 F11P03951 625 aa12.54□□□□□ -0.4
MCF2-207ENST00000483690 MAPK8P45983 427 aa12.54□□□□□ -0.4
MCF2-207ENST00000483690 ARSDP51689 593 aa12.54□□□□□ -0.4
MCF2-207ENST00000483690 C8orf34Q49A92 452 aa12.54□□□□□ -0.4
MCF2-207ENST00000483690 MRRFQ96E11 262 aaKnown RBP12.54□□□□□ -0.4
MCF2-207ENST00000483690 GAS2L1Q99501 681 aaPredicted RBP12.54□□□□□ -0.4
MCF2-207ENST00000483690 CRISPLD1Q9H336 500 aa12.54□□□□□ -0.4
MCF2-207ENST00000483690 RUBCNLQ9H714 662 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms